-ctat genome lib [/tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.voQMPVCQPM/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary -sample contains 51988336 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir -J /tmp/nxf.voQMPVCQPM/HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.voQMPVCQPM/HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=18750.00/min [20000], rate=22222.22/min [30000], rate=21951.22/min [40000], rate=21818.18/min [50000], rate=22556.39/min [60000], rate=24489.80/min [70000], rate=25609.76/min [80000], rate=26373.63/min [90000], rate=27692.31/min [100000], rate=28985.51/min [110000], rate=30555.56/min [120000], rate=30769.23/min [130000], rate=31451.61/min [140000], rate=32558.14/min [150000], rate=32967.03/min [160000], rate=33684.21/min [170000], rate=35051.55/min [180000], rate=36363.64/min [190000], rate=37377.05/min [200000], rate=37735.85/min [210000], rate=38769.23/min [220000], rate=39520.96/min [230000], rate=40469.21/min [240000], rate=41260.74/min [250000], rate=42134.83/min [260000], rate=42391.30/min [270000], rate=42519.69/min [280000], rate=42857.14/min [290000], rate=42857.14/min [300000], rate=43062.20/min [310000], rate=43055.56/min [320000], rate=43146.07/min [330000], rate=43231.44/min [340000], rate=43128.96/min [350000], rate=42682.93/min [360000], rate=43636.36/min [370000], rate=44578.31/min [380000], rate=45600.00/min [390000], rate=46706.59/min [400000], rate=47713.72/min [410000], rate=48520.71/min [420000], rate=49218.75/min [430000], rate=49710.98/min [440000], rate=49530.96/min [450000], rate=49180.33/min [460000], rate=49373.88/min [470000], rate=49647.89/min [480000], rate=50086.96/min [490000], rate=49915.11/min [500000], rate=50335.57/min [510000], rate=51085.14/min [520000], rate=51400.33/min [530000], rate=51290.32/min [540000], rate=50310.56/min [550000], rate=50691.24/min [560000], rate=51454.82/min [570000], rate=52293.58/min [580000], rate=52968.04/min [590000], rate=53073.46/min [600000], rate=52554.74/min [610000], rate=52813.85/min [620000], rate=52542.37/min [630000], rate=52867.13/min [640000], rate=53185.60/min [650000], rate=53719.01/min [660000], rate=54395.60/min [670000], rate=55068.49/min [680000], rate=55813.95/min [690000], rate=56480.22/min [700000], rate=57065.22/min [710000], rate=57412.40/min [720000], rate=57831.33/min [730000], rate=57480.31/min [740000], rate=57142.86/min [750000], rate=57324.84/min [760000], rate=57648.55/min [770000], rate=57894.74/min [780000], rate=57920.79/min [790000], rate=58302.58/min [800000], rate=58823.53/min [810000], rate=59413.20/min [820000], rate=60073.26/min [830000], rate=60583.94/min [840000], rate=61165.05/min [850000], rate=61004.78/min [860000], rate=60705.88/min [870000], rate=60416.67/min [880000], rate=60829.49/min [890000], rate=61449.94/min [900000], rate=62068.97/min [910000], rate=62328.77/min [920000], rate=62727.27/min [930000], rate=62908.68/min [940000], rate=63228.70/min [950000], rate=63403.78/min [960000], rate=63858.09/min [970000], rate=64026.40/min [980000], rate=64192.14/min [990000], rate=64216.22/min [1000000], rate=64655.17/min [1010000], rate=65091.30/min [1020000], rate=65314.83/min [1030000], rate=65605.10/min [1040000], rate=65892.29/min [1050000], rate=66315.79/min [1060000], rate=66181.06/min [1070000], rate=66322.31/min [1080000], rate=66529.77/min [1090000], rate=66734.69/min [1100000], rate=67005.08/min [1110000], rate=67272.73/min [1120000], rate=67469.88/min [1130000], rate=67128.71/min [1140000], rate=66279.07/min [1150000], rate=66028.71/min [1160000], rate=65846.74/min [1170000], rate=65730.34/min [1180000], rate=65434.38/min [1190000], rate=65444.55/min [1200000], rate=65395.10/min [1210000], rate=65464.38/min [1220000], rate=65532.68/min [1230000], rate=65658.36/min -building interval tree based on /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=28571.43/min [20000], rate=35294.12/min [30000], rate=36000.00/min [40000], rate=40677.97/min [50000], rate=46153.85/min [60000], rate=51428.57/min [70000], rate=54545.45/min [80000], rate=47058.82/min [90000], rate=45378.15/min [100000], rate=43795.62/min [110000], rate=43708.61/min [120000], rate=42105.26/min [130000], rate=41935.48/min [140000], rate=40975.61/min [150000], rate=41860.47/min [160000], rate=42477.88/min [170000], rate=43037.97/min [180000], rate=42687.75/min [190000], rate=40425.53/min [200000], rate=39603.96/min [210000], rate=39747.63/min [220000], rate=39053.25/min [230000], rate=38547.49/min [240000], rate=38297.87/min [250000], rate=38659.79/min [260000], rate=39294.71/min [270000], rate=40000.00/min [280000], rate=40579.71/min [290000], rate=41232.23/min [300000], rate=41666.67/min [310000], rate=41059.60/min [320000], rate=40938.17/min [330000], rate=40993.79/min [340000], rate=40476.19/min [350000], rate=39622.64/min [360000], rate=39560.44/min [370000], rate=39572.19/min [380000], rate=39446.37/min [390000], rate=39261.74/min [400000], rate=39408.87/min [410000], rate=39870.34/min [420000], rate=40449.44/min [430000], rate=41280.00/min [440000], rate=41509.43/min [450000], rate=41860.47/min [460000], rate=42461.54/min [470000], rate=43053.44/min [480000], rate=42666.67/min [490000], rate=42180.77/min [500000], rate=41322.31/min [510000], rate=41184.39/min [520000], rate=40998.69/min [530000], rate=40561.22/min [540000], rate=40806.05/min [550000], rate=41044.78/min [560000], rate=40925.70/min [570000], rate=40714.29/min [580000], rate=40371.23/min [590000], rate=40503.43/min [600000], rate=40816.33/min [610000], rate=41123.60/min [620000], rate=41517.86/min [630000], rate=41538.46/min [640000], rate=41921.40/min [650000], rate=42025.86/min [660000], rate=42352.94/min [670000], rate=42720.51/min [680000], rate=43083.42/min [690000], rate=43396.23/min [700000], rate=43750.00/min [710000], rate=44099.38/min [720000], rate=44490.22/min [730000], rate=44877.05/min [740000], rate=45167.85/min [750000], rate=45408.68/min [760000], rate=45283.02/min [770000], rate=45249.76/min [780000], rate=45392.82/min [790000], rate=45664.74/min [800000], rate=45889.10/min [810000], rate=46241.67/min [820000], rate=46546.83/min [830000], rate=46892.66/min [840000], rate=47279.55/min [850000], rate=47752.81/min [860000], rate=48134.33/min [870000], rate=48558.14/min [880000], rate=48843.66/min [890000], rate=49035.81/min [900000], rate=49180.33/min [910000], rate=49233.54/min [920000], rate=49241.75/min [930000], rate=49293.29/min [940000], rate=49473.68/min [950000], rate=49522.15/min [960000], rate=49698.02/min [970000], rate=49828.77/min [980000], rate=49957.52/min [990000], rate=50381.68/min [1000000], rate=50847.46/min [1010000], rate=51269.04/min [1020000], rate=51689.19/min [1030000], rate=51976.45/min [1040000], rate=52217.57/min [1050000], rate=52587.65/min [1060000], rate=52692.63/min [1070000], rate=52883.03/min [1080000], rate=53158.33/min [1090000], rate=53431.37/min [1100000], rate=53614.95/min [1110000], rate=53709.68/min [1120000], rate=53932.58/min [1130000], rate=54023.90/min [1140000], rate=54328.83/min [1150000], rate=54588.61/min [1160000], rate=54889.59/min [1170000], rate=55319.15/min [1180000], rate=55660.38/min [1190000], rate=55912.29/min [1200000], rate=56162.25/min [1210000], rate=56454.12/min [1220000], rate=56700.23/min -building interval tree based on /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=54545.45/min [30000], rate=64285.71/min [40000], rate=80000.00/min [50000], rate=96774.19/min [60000], rate=112500.00/min [70000], rate=110526.32/min [80000], rate=102127.66/min [90000], rate=94736.84/min [100000], rate=89552.24/min [110000], rate=90410.96/min [120000], rate=88888.89/min [130000], rate=91764.71/min [140000], rate=90322.58/min [150000], rate=90000.00/min [160000], rate=93203.88/min [170000], rate=98076.92/min [180000], rate=103846.15/min [190000], rate=107547.17/min [200000], rate=111111.11/min [210000], rate=109565.22/min [220000], rate=109090.91/min [230000], rate=102222.22/min [240000], rate=105109.49/min [250000], rate=108695.65/min [260000], rate=112230.22/min [270000], rate=112500.00/min [280000], rate=111258.28/min [290000], rate=110828.03/min [300000], rate=109756.10/min [310000], rate=108139.53/min [320000], rate=107262.57/min [330000], rate=107608.70/min [340000], rate=105154.64/min [350000], rate=103960.40/min [360000], rate=105365.85/min [370000], rate=107766.99/min [380000], rate=110144.93/min [390000], rate=111961.72/min [400000], rate=114832.54/min [410000], rate=112328.77/min [420000], rate=110043.67/min [430000], rate=105737.70/min [440000], rate=106024.10/min [450000], rate=107569.72/min [460000], rate=109960.16/min [470000], rate=110588.24/min [480000], rate=109505.70/min [490000], rate=107299.27/min [500000], rate=107526.88/min [510000], rate=105517.24/min [520000], rate=106122.45/min [530000], rate=105647.84/min [540000], rate=104854.37/min [550000], rate=104761.90/min [560000], rate=105000.00/min [570000], rate=104587.16/min [580000], rate=103571.43/min [590000], rate=102608.70/min [600000], rate=101983.00/min [610000], rate=103098.59/min [620000], rate=104201.68/min [630000], rate=105586.59/min [640000], rate=105785.12/min [650000], rate=105691.06/min [660000], rate=105882.35/min [670000], rate=106631.30/min [680000], rate=104347.83/min [690000], rate=104020.10/min [700000], rate=103960.40/min [710000], rate=104411.76/min [720000], rate=104600.48/min [730000], rate=105542.17/min [740000], rate=99328.86/min [750000], rate=89463.22/min [760000], rate=83060.11/min [770000], rate=77386.93/min [780000], rate=71889.40/min [790000], rate=67714.29/min [800000], rate=64257.03/min [810000], rate=61675.13/min [820000], rate=60146.70/min [830000], rate=59427.21/min [840000], rate=58468.68/min [850000], rate=57888.76/min [860000], rate=57461.02/min [870000], rate=56986.90/min [880000], rate=56591.64/min [890000], rate=56388.60/min [900000], rate=56133.06/min [910000], rate=55714.29/min [920000], rate=55589.12/min [930000], rate=55302.28/min [940000], rate=55131.96/min [950000], rate=55072.46/min [960000], rate=55384.62/min [970000], rate=55640.54/min [980000], rate=55787.48/min [990000], rate=55565.95/min [1000000], rate=55658.63/min [1010000], rate=55596.33/min [1020000], rate=55788.51/min [1030000], rate=55927.60/min [1040000], rate=55813.95/min [1050000], rate=55900.62/min [1060000], rate=56084.66/min [1070000], rate=56315.79/min [1080000], rate=56643.36/min [1090000], rate=56869.57/min [1100000], rate=57192.37/min [1110000], rate=57167.38/min [1120000], rate=56708.86/min [1130000], rate=56172.33/min [1140000], rate=56019.66/min [1150000], rate=55915.72/min [1160000], rate=55680.00/min [1170000], rate=55714.29/min [1180000], rate=55880.03/min [1190000], rate=56000.00/min [1200000], rate=56162.25/min [1210000], rate=56279.07/min [1220000], rate=56307.69/min -building interval tree based on /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=20689.66/min [20000], rate=20689.66/min [30000], rate=22222.22/min [40000], rate=24489.80/min [50000], rate=26315.79/min [60000], rate=27272.73/min [70000], rate=28965.52/min [80000], rate=28915.66/min [90000], rate=26865.67/min [100000], rate=26200.87/min [110000], rate=26506.02/min [120000], rate=26568.27/min [130000], rate=26440.68/min [140000], rate=27009.65/min [150000], rate=26470.59/min [160000], rate=27042.25/min [170000], rate=28021.98/min [180000], rate=28954.42/min [190000], rate=29533.68/min [200000], rate=30303.03/min [210000], rate=30882.35/min [220000], rate=31578.95/min [230000], rate=31724.14/min [240000], rate=32000.00/min [250000], rate=32822.76/min [260000], rate=33262.26/min [270000], rate=34177.22/min [280000], rate=34854.77/min [290000], rate=34939.76/min [300000], rate=34749.03/min [310000], rate=34508.35/min [320000], rate=34845.74/min [330000], rate=35420.39/min [340000], rate=35664.34/min [350000], rate=36082.47/min [360000], rate=36180.90/min [370000], rate=36694.21/min [380000], rate=37377.05/min [390000], rate=38110.75/min [400000], rate=38400.00/min [410000], rate=38497.65/min [420000], rate=38356.16/min [430000], rate=38796.99/min [440000], rate=38995.57/min [450000], rate=39301.31/min [460000], rate=39769.45/min [470000], rate=40000.00/min [480000], rate=40563.38/min [490000], rate=40607.73/min [500000], rate=40705.56/min [510000], rate=40583.55/min [520000], rate=39543.73/min [530000], rate=39650.87/min [540000], rate=40148.70/min [550000], rate=40690.51/min [560000], rate=40530.76/min [570000], rate=40569.40/min [580000], rate=40654.21/min [590000], rate=40642.94/min [600000], rate=40133.78/min [610000], rate=39825.90/min [620000], rate=39701.17/min [630000], rate=39581.15/min [640000], rate=39669.42/min [650000], rate=39795.92/min [660000], rate=39919.35/min [670000], rate=40240.24/min [680000], rate=40476.19/min [690000], rate=40707.96/min [700000], rate=40935.67/min [710000], rate=41159.42/min [720000], rate=41458.73/min [730000], rate=41793.89/min [740000], rate=42165.24/min [750000], rate=42533.08/min [760000], rate=42897.46/min [770000], rate=42502.30/min [780000], rate=42162.16/min [790000], rate=42245.99/min [800000], rate=42290.75/min [810000], rate=42150.91/min [820000], rate=42159.38/min [830000], rate=42239.19/min [840000], rate=42352.94/min [850000], rate=42606.52/min [860000], rate=42786.07/min [870000], rate=42857.14/min [880000], rate=42857.14/min [890000], rate=43064.52/min [900000], rate=43303.93/min [910000], rate=43540.67/min [920000], rate=43844.32/min [930000], rate=44180.52/min [940000], rate=44444.44/min [950000], rate=44811.32/min [960000], rate=45211.93/min [970000], rate=45647.06/min [980000], rate=46009.39/min [990000], rate=46261.68/min [1000000], rate=46547.71/min [1010000], rate=46867.75/min [1020000], rate=46968.53/min [1030000], rate=47103.66/min [1040000], rate=47201.21/min [1050000], rate=47297.30/min [1060000], rate=47462.69/min [1070000], rate=47661.47/min [1080000], rate=47787.61/min [1090000], rate=47947.21/min [1100000], rate=48069.92/min [1110000], rate=48191.03/min [1120000], rate=48345.32/min [1130000], rate=48463.19/min [1140000], rate=48545.07/min [1150000], rate=48763.25/min [1160000], rate=48979.59/min [1170000], rate=49194.11/min [1180000], rate=49406.84/min [1190000], rate=49652.29/min [1200000], rate=49930.65/min [1210000], rate=49828.41/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir --filt_file /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 12000000.00 reads per min processed... 10000000.00 reads per min processed... 12000000.00 reads per min processed... 10500000.00 reads per min processed... 6857142.86 reads per min processed... 6000000.00 reads per min processed... 5454545.45 reads per min processed... 4714285.71 reads per min processed... 4800000.00 reads per min processed... 4333333.33 reads per min processed... 4200000.00 reads per min processed... 4090909.09 reads per min processed... 4000000.00 reads per min processed... 4080000.00 reads per min processed... 4000000.00 reads per min processed... 4071428.57 reads per min processed... 4137931.03 reads per min processed... 4200000.00 reads per min processed... 4125000.00 reads per min processed... 4181818.18 reads per min processed... 4235294.12 reads per min processed... 4285714.29 reads per min processed... 4457142.86 reads per min processed... 4500000.00 reads per min processed... 4666666.67 reads per min processed... 4702702.70 reads per min processed... 4736842.11 reads per min processed... 4894736.84 reads per min processed... 4800000.00 reads per min processed... 4829268.29 reads per min processed... 4857142.86 reads per min processed... 4883720.93 reads per min processed... 4909090.91 reads per min processed... 4933333.33 reads per min processed... 4851063.83 reads per min processed... 4875000.00 reads per min processed... 4897959.18 reads per min processed... 4823529.41 reads per min processed... 4846153.85 reads per min processed... 4867924.53 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.voQMPVCQPM/HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -77619.789562 EM: Round [1] log likelihood: -77430.461392 EM: Round [2] log likelihood: -77356.110290 EM: Round [3] log likelihood: -77320.047110 EM: Round [4] log likelihood: -77300.730398 EM: Round [5] log likelihood: -77289.799937 EM: Round [6] log likelihood: -77283.331989 EM: Round [7] log likelihood: -77279.332290 EM: Round [8] log likelihood: -77276.750221 EM: Round [9] log likelihood: -77275.015751 EM: Round [10] log likelihood: -77273.809060 EM: Round [11] log likelihood: -77272.943911 EM: Round [12] log likelihood: -77272.307626 EM: Round [13] log likelihood: -77271.829462 EM: Round [14] log likelihood: -77271.463458 EM: Round [15] log likelihood: -77271.178819 EM: Round [16] log likelihood: -77270.954351 EM: Round [17] log likelihood: -77270.775121 EM: Round [18] log likelihood: -77270.630394 EM: Round [19] log likelihood: -77270.512319 EM: Round [20] log likelihood: -77270.415067 EM: Round [21] log likelihood: -77270.334254 EM: Round [22] log likelihood: -77270.266543 EM: Round [23] log likelihood: -77270.209367 EM: Round [24] log likelihood: -77270.160734 EM: Round [25] log likelihood: -77270.119083 EM: Round [26] log likelihood: -77270.083180 EM: Round [27] log likelihood: -77270.052043 EM: Round [28] log likelihood: -77270.024886 EM: Round [29] log likelihood: -77270.001071 EM: Round [30] log likelihood: -77269.980081 EM: Round [31] log likelihood: -77269.961493 EM: Round [32] log likelihood: -77269.944957 EM: Round [33] log likelihood: -77269.930185 EM: Round [34] log likelihood: -77269.916935 EM: Round [35] log likelihood: -77269.905006 EM: Round [36] log likelihood: -77269.894226 EM: Round [37] log likelihood: -77269.884453 EM: Round [38] log likelihood: -77269.875564 EM: Round [39] log likelihood: -77269.867453 EM: Round [40] log likelihood: -77269.860032 EM: Round [41] log likelihood: -77269.853223 EM: Round [42] log likelihood: -77269.846959 EM: Round [43] log likelihood: -77269.841181 EM: Round [44] log likelihood: -77269.835840 EM: Round [45] log likelihood: -77269.830891 EM: Round [46] log likelihood: -77269.826295 EM: Round [47] log likelihood: -77269.822019 EM: Round [48] log likelihood: -77269.818031 EM: Round [49] log likelihood: -77269.814306 EM: Round [50] log likelihood: -77269.810819 EM: Round [51] log likelihood: -77269.807550 EM: Round [52] log likelihood: -77269.804480 EM: Round [53] log likelihood: -77269.801593 EM: Round [54] log likelihood: -77269.798873 EM: Round [55] log likelihood: -77269.796306 EM: Round [56] log likelihood: -77269.793881 EM: Round [57] log likelihood: -77269.791587 EM: Round [58] log likelihood: -77269.789414 EM: Round [59] log likelihood: -77269.787353 EM: Round [60] log likelihood: -77269.785396 EM: Round [61] log likelihood: -77269.783536 EM: Round [62] log likelihood: -77269.781765 EM: Round [63] log likelihood: -77269.780078 EM: Round [64] log likelihood: -77269.778469 EM: Round [65] log likelihood: -77269.776933 EM: Round [66] log likelihood: -77269.775465 EM: Round [67] log likelihood: -77269.774062 EM: Round [68] log likelihood: -77269.772719 EM: Round [69] log likelihood: -77269.771432 EM: Round [70] log likelihood: -77269.770198 EM: Round [71] log likelihood: -77269.769014 EM: Round [72] log likelihood: -77269.767878 EM: Round [73] log likelihood: -77269.766786 EM: Round [74] log likelihood: -77269.765736 EM: Round [75] log likelihood: -77269.764726 EM: Round [76] log likelihood: -77269.763754 EM: Round [77] log likelihood: -77269.762817 EM: Round [78] log likelihood: -77269.761914 EM: Round [79] log likelihood: -77269.761044 EM: Round [80] log likelihood: -77269.760204 EM: Round [81] log likelihood: -77269.759393 EM: Round [82] log likelihood: -77269.758610 EM: Round [83] log likelihood: -77269.757853 EM: Round [84] log likelihood: -77269.757121 EM: Round [85] log likelihood: -77269.756413 EM: Round [86] log likelihood: -77269.755729 EM: Round [87] log likelihood: -77269.755066 EM: Round [88] log likelihood: -77269.754424 EM: Round [89] log likelihood: -77269.753802 EM: Round [90] log likelihood: -77269.753199 EM: Round [91] log likelihood: -77269.752615 EM: Round [92] log likelihood: -77269.752048 EM: Round [93] log likelihood: -77269.751499 EM: Round [94] log likelihood: -77269.750965 EM: Round [95] log likelihood: -77269.750447 EM: Round [96] log likelihood: -77269.749944 EM: Round [97] log likelihood: -77269.749456 EM: Round [98] log likelihood: -77269.748981 EM: Round [99] log likelihood: -77269.748520 EM: Round [100] log likelihood: -77269.748071 EM: Round [101] log likelihood: -77269.747635 EM: Round [102] log likelihood: -77269.747211 EM: Round [103] log likelihood: -77269.746798 EM: Round [104] log likelihood: -77269.746397 EM: Round [105] log likelihood: -77269.746006 EM: Round [106] log likelihood: -77269.745626 EM: Round [107] log likelihood: -77269.745255 EM: Round [108] log likelihood: -77269.744894 EM: Round [109] log likelihood: -77269.744543 EM: Round [110] log likelihood: -77269.744200 EM: Round [111] log likelihood: -77269.743866 EM: Round [112] log likelihood: -77269.743541 EM: Round [113] log likelihood: -77269.743224 EM: Round [114] log likelihood: -77269.742915 EM: Round [115] log likelihood: -77269.742613 EM: Round [116] log likelihood: -77269.742319 EM: Round [117] log likelihood: -77269.742032 EM: Round [118] log likelihood: -77269.741752 EM: Round [119] log likelihood: -77269.741479 EM: Round [120] log likelihood: -77269.741212 EM: Round [121] log likelihood: -77269.740952 EM: Round [122] log likelihood: -77269.740698 EM: Round [123] log likelihood: -77269.740450 EM: Round [124] log likelihood: -77269.740208 EM: Round [125] log likelihood: -77269.739971 EM: Round [126] log likelihood: -77269.739740 EM: Round [127] log likelihood: -77269.739515 EM: Round [128] log likelihood: -77269.739294 EM: Round [129] log likelihood: -77269.739079 EM: Round [130] log likelihood: -77269.738868 EM: Round [131] log likelihood: -77269.738663 EM: Round [132] log likelihood: -77269.738462 EM: Round [133] log likelihood: -77269.738265 EM: Round [134] log likelihood: -77269.738073 EM: Round [135] log likelihood: -77269.737885 EM: Round [136] log likelihood: -77269.737701 EM: Round [137] log likelihood: -77269.737522 EM: Round [138] log likelihood: -77269.737346 EM: Round [139] log likelihood: -77269.737174 EM: Round [140] log likelihood: -77269.737006 EM: Round [141] log likelihood: -77269.736842 EM: Round [142] log likelihood: -77269.736681 EM: Round [143] log likelihood: -77269.736523 EM: Round [144] log likelihood: -77269.736369 EM: Round [145] log likelihood: -77269.736219 EM: Round [146] log likelihood: -77269.736071 EM: Round [147] log likelihood: -77269.735927 EM: Round [148] log likelihood: -77269.735785 EM: Round [149] log likelihood: -77269.735647 EM: Round [150] log likelihood: -77269.735512 EM: Round [151] log likelihood: -77269.735379 EM: Round [152] log likelihood: -77269.735249 EM: Round [153] log likelihood: -77269.735122 EM: Round [154] log likelihood: -77269.734997 EM: Round [155] log likelihood: -77269.734875 EM: Round [156] log likelihood: -77269.734756 EM: Round [157] log likelihood: -77269.734639 EM: Round [158] log likelihood: -77269.734524 EM: Round [159] log likelihood: -77269.734412 EM: Round [160] log likelihood: -77269.734302 EM: Round [161] log likelihood: -77269.734194 EM: Round [162] log likelihood: -77269.734089 EM: Round [163] log likelihood: -77269.733985 EM: Round [164] log likelihood: -77269.733884 EM: Round [165] log likelihood: -77269.733784 EM: Stopping iterations at round 165 due to insufficient improvement in likelihood. EM: Starting log likelihood: -77556.154605 EM: Round [1] log likelihood: -77388.744313 EM: Round [2] log likelihood: -77326.995134 EM: Round [3] log likelihood: -77298.151737 EM: Round [4] log likelihood: -77283.044835 EM: Round [5] log likelihood: -77274.625060 EM: Round [6] log likelihood: -77269.699843 EM: Round [7] log likelihood: -77266.683704 EM: Round [8] log likelihood: -77264.753729 EM: Round [9] log likelihood: -77263.467778 EM: Round [10] log likelihood: -77262.579604 EM: Round [11] log likelihood: -77261.946782 EM: Round [12] log likelihood: -77261.483753 EM: Round [13] log likelihood: -77261.137202 EM: Round [14] log likelihood: -77260.872763 EM: Round [15] log likelihood: -77260.667584 EM: Round [16] log likelihood: -77260.506048 EM: Round [17] log likelihood: -77260.377223 EM: Round [18] log likelihood: -77260.273292 EM: Round [19] log likelihood: -77260.188565 EM: Round [20] log likelihood: -77260.118832 EM: Round [21] log likelihood: -77260.060936 EM: Round [22] log likelihood: -77260.012478 EM: Round [23] log likelihood: -77259.971614 EM: Round [24] log likelihood: -77259.936915 EM: Round [25] log likelihood: -77259.907260 EM: Round [26] log likelihood: -77259.881763 EM: Round [27] log likelihood: -77259.859716 EM: Round [28] log likelihood: -77259.840551 EM: Round [29] log likelihood: -77259.823809 EM: Round [30] log likelihood: -77259.809115 EM: Round [31] log likelihood: -77259.796160 EM: Round [32] log likelihood: -77259.784691 EM: Round [33] log likelihood: -77259.774496 EM: Round [34] log likelihood: -77259.765398 EM: Round [35] log likelihood: -77259.757250 EM: Round [36] log likelihood: -77259.749926 EM: Round [37] log likelihood: -77259.743319 EM: Round [38] log likelihood: -77259.737341 EM: Round [39] log likelihood: -77259.731912 EM: Round [40] log likelihood: -77259.726968 EM: Round [41] log likelihood: -77259.722451 EM: Round [42] log likelihood: -77259.718311 EM: Round [43] log likelihood: -77259.714507 EM: Round [44] log likelihood: -77259.711001 EM: Round [45] log likelihood: -77259.707760 EM: Round [46] log likelihood: -77259.704757 EM: Round [47] log likelihood: -77259.701967 EM: Round [48] log likelihood: -77259.699367 EM: Round [49] log likelihood: -77259.696940 EM: Round [50] log likelihood: -77259.694667 EM: Round [51] log likelihood: -77259.692536 EM: Round [52] log likelihood: -77259.690531 EM: Round [53] log likelihood: -77259.688642 EM: Round [54] log likelihood: -77259.686858 EM: Round [55] log likelihood: -77259.685170 EM: Round [56] log likelihood: -77259.683570 EM: Round [57] log likelihood: -77259.682051 EM: Round [58] log likelihood: -77259.680606 EM: Round [59] log likelihood: -77259.679228 EM: Round [60] log likelihood: -77259.677914 EM: Round [61] log likelihood: -77259.676658 EM: Round [62] log likelihood: -77259.675456 EM: Round [63] log likelihood: -77259.674304 EM: Round [64] log likelihood: -77259.673199 EM: Round [65] log likelihood: -77259.672137 EM: Round [66] log likelihood: -77259.671116 EM: Round [67] log likelihood: -77259.670133 EM: Round [68] log likelihood: -77259.669186 EM: Round [69] log likelihood: -77259.668273 EM: Round [70] log likelihood: -77259.667391 EM: Round [71] log likelihood: -77259.666539 EM: Round [72] log likelihood: -77259.665715 EM: Round [73] log likelihood: -77259.664918 EM: Round [74] log likelihood: -77259.664147 EM: Round [75] log likelihood: -77259.663399 EM: Round [76] log likelihood: -77259.662675 EM: Round [77] log likelihood: -77259.661972 EM: Round [78] log likelihood: -77259.661290 EM: Round [79] log likelihood: -77259.660628 EM: Round [80] log likelihood: -77259.659985 EM: Round [81] log likelihood: -77259.659360 EM: Round [82] log likelihood: -77259.658753 EM: Round [83] log likelihood: -77259.658162 EM: Round [84] log likelihood: -77259.657588 EM: Round [85] log likelihood: -77259.657029 EM: Round [86] log likelihood: -77259.656485 EM: Round [87] log likelihood: -77259.655955 EM: Round [88] log likelihood: -77259.655439 EM: Round [89] log likelihood: -77259.654936 EM: Round [90] log likelihood: -77259.654446 EM: Round [91] log likelihood: -77259.653969 EM: Round [92] log likelihood: -77259.653504 EM: Round [93] log likelihood: -77259.653050 EM: Round [94] log likelihood: -77259.652607 EM: Round [95] log likelihood: -77259.652176 EM: Round [96] log likelihood: -77259.651755 EM: Round [97] log likelihood: -77259.651344 EM: Round [98] log likelihood: -77259.650943 EM: Round [99] log likelihood: -77259.650552 EM: Round [100] log likelihood: -77259.650170 EM: Round [101] log likelihood: -77259.649797 EM: Round [102] log likelihood: -77259.649433 EM: Round [103] log likelihood: -77259.649077 EM: Round [104] log likelihood: -77259.648730 EM: Round [105] log likelihood: -77259.648391 EM: Round [106] log likelihood: -77259.648059 EM: Round [107] log likelihood: -77259.647736 EM: Round [108] log likelihood: -77259.647419 EM: Round [109] log likelihood: -77259.647110 EM: Round [110] log likelihood: -77259.646808 EM: Round [111] log likelihood: -77259.646513 EM: Round [112] log likelihood: -77259.646225 EM: Round [113] log likelihood: -77259.645943 EM: Round [114] log likelihood: -77259.645667 EM: Round [115] log likelihood: -77259.645398 EM: Round [116] log likelihood: -77259.645134 EM: Round [117] log likelihood: -77259.644876 EM: Round [118] log likelihood: -77259.644624 EM: Round [119] log likelihood: -77259.644378 EM: Round [120] log likelihood: -77259.644137 EM: Round [121] log likelihood: -77259.643901 EM: Round [122] log likelihood: -77259.643671 EM: Round [123] log likelihood: -77259.643445 EM: Round [124] log likelihood: -77259.643225 EM: Round [125] log likelihood: -77259.643009 EM: Round [126] log likelihood: -77259.642798 EM: Round [127] log likelihood: -77259.642591 EM: Round [128] log likelihood: -77259.642389 EM: Round [129] log likelihood: -77259.642191 EM: Round [130] log likelihood: -77259.641997 EM: Round [131] log likelihood: -77259.641808 EM: Round [132] log likelihood: -77259.641622 EM: Round [133] log likelihood: -77259.641441 EM: Round [134] log likelihood: -77259.641263 EM: Round [135] log likelihood: -77259.641089 EM: Round [136] log likelihood: -77259.640919 EM: Round [137] log likelihood: -77259.640752 EM: Round [138] log likelihood: -77259.640589 EM: Round [139] log likelihood: -77259.640429 EM: Round [140] log likelihood: -77259.640273 EM: Round [141] log likelihood: -77259.640120 EM: Round [142] log likelihood: -77259.639970 EM: Round [143] log likelihood: -77259.639823 EM: Round [144] log likelihood: -77259.639679 EM: Round [145] log likelihood: -77259.639538 EM: Round [146] log likelihood: -77259.639400 EM: Round [147] log likelihood: -77259.639265 EM: Round [148] log likelihood: -77259.639132 EM: Round [149] log likelihood: -77259.639002 EM: Round [150] log likelihood: -77259.638875 EM: Round [151] log likelihood: -77259.638751 EM: Round [152] log likelihood: -77259.638629 EM: Round [153] log likelihood: -77259.638509 EM: Round [154] log likelihood: -77259.638392 EM: Round [155] log likelihood: -77259.638277 EM: Round [156] log likelihood: -77259.638165 EM: Round [157] log likelihood: -77259.638055 EM: Round [158] log likelihood: -77259.637947 EM: Round [159] log likelihood: -77259.637841 EM: Round [160] log likelihood: -77259.637737 EM: Round [161] log likelihood: -77259.637635 EM: Round [162] log likelihood: -77259.637535 EM: Stopping iterations at round 162 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 51988336 > /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir > /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir --annotate /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir -done, see /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 328, filtered: 3850) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.voQMPVCQPM/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.voQMPVCQPM/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000259020.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203930.12] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000241175.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250398.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000259315.1] WARNING, no entry stored in dbm for [ENSG00000273062.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000279714.1] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000278433.1] WARNING, no entry stored in dbm for [ENSG00000237036.5] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000184106.8] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000250995.1] WARNING, no entry stored in dbm for [ENSG00000228791.8] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000232973.13] WARNING, no entry stored in dbm for [ENSG00000272274.2] WARNING, no entry stored in dbm for [ENSG00000254880.1] WARNING, no entry stored in dbm for [ENSG00000239332.6] WARNING, no entry stored in dbm for [ENSG00000235033.7] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000228948.2] WARNING, no entry stored in dbm for [ENSG00000235064.1] WARNING, no entry stored in dbm for [ENSG00000231367.6] WARNING, no entry stored in dbm for [ENSG00000249096.7] WARNING, no entry stored in dbm for [ENSG00000196183.5] WARNING, no entry stored in dbm for [ENSG00000230508.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000222177.1] WARNING, no entry stored in dbm for [ENSG00000200653.1] WARNING, no entry stored in dbm for [ENSG00000222177.1] WARNING, no entry stored in dbm for [ENSG00000201342.1] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000240863.3] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000241529.3] WARNING, no entry stored in dbm for [ENSG00000239710.3] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000239702.3] WARNING, no entry stored in dbm for [ENSG00000241665.3] WARNING, no entry stored in dbm for [ENSG00000275014.1] WARNING, no entry stored in dbm for [ENSG00000248360.7] WARNING, no entry stored in dbm for [ENSG00000272195.1] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000286599.1] WARNING, no entry stored in dbm for [ENSG00000249655.1] WARNING, no entry stored in dbm for [ENSG00000257634.1] WARNING, no entry stored in dbm for [ENSG00000183242.12] WARNING, no entry stored in dbm for [ENSG00000184669.9] WARNING, no entry stored in dbm for [ENSG00000232728.1] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000225271.1] WARNING, no entry stored in dbm for [ENSG00000259192.1] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000283907.1] WARNING, no entry stored in dbm for [ENSG00000227765.4] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000251562.8] WARNING, no entry stored in dbm for [ENSG00000214141.4] WARNING, no entry stored in dbm for [ENSG00000251513.2] WARNING, no entry stored in dbm for [ENSG00000250331.2] WARNING, no entry stored in dbm for [ENSG00000205056.8] WARNING, no entry stored in dbm for [ENSG00000249655.1] WARNING, no entry stored in dbm for [ENSG00000258819.2] WARNING, no entry stored in dbm for [ENSG00000237222.4] WARNING, no entry stored in dbm for [ENSG00000267308.3] WARNING, no entry stored in dbm for [ENSG00000275807.1] WARNING, no entry stored in dbm for [ENSG00000232100.1] WARNING, no entry stored in dbm for [ENSG00000237491.10] WARNING, no entry stored in dbm for [ENSG00000228812.7] WARNING, no entry stored in dbm for [ENSG00000251562.8] WARNING, no entry stored in dbm for [ENSG00000224791.1] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000240137.6] WARNING, no entry stored in dbm for [ENSG00000207441.1] WARNING, no entry stored in dbm for [ENSG00000272767.1] WARNING, no entry stored in dbm for [ENSG00000237872.4] WARNING, no entry stored in dbm for [ENSG00000244097.1] WARNING, no entry stored in dbm for [ENSG00000230461.9] WARNING, no entry stored in dbm for [ENSG00000223715.3] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000255308.1] WARNING, no entry stored in dbm for [ENSG00000232807.2] WARNING, no entry stored in dbm for [ENSG00000203993.6] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000254055.2] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000286975.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000228830.1] WARNING, no entry stored in dbm for [ENSG00000237422.2] WARNING, no entry stored in dbm for [ENSG00000287562.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000267127.7] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000257681.1] WARNING, no entry stored in dbm for [ENSG00000205682.2] WARNING, no entry stored in dbm for [ENSG00000286970.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000267433.1] WARNING, no entry stored in dbm for [ENSG00000236531.2] WARNING, no entry stored in dbm for [ENSG00000268189.2] WARNING, no entry stored in dbm for [ENSG00000228204.2] * STAR-Fusion complete. See output: /tmp/nxf.voQMPVCQPM/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)