-ctat genome lib [/tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.AWyLpE06cx/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary -sample contains 104792775 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir -J /tmp/nxf.AWyLpE06cx/EndoN_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.AWyLpE06cx/EndoN_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=70588.24/min [30000], rate=62068.97/min [40000], rate=58536.59/min [50000], rate=58823.53/min [60000], rate=62068.97/min [70000], rate=64615.38/min [80000], rate=67605.63/min [90000], rate=66666.67/min [100000], rate=66666.67/min [110000], rate=66000.00/min [120000], rate=66055.05/min [130000], rate=67241.38/min [140000], rate=68292.68/min [150000], rate=69230.77/min [160000], rate=71111.11/min [170000], rate=72340.43/min [180000], rate=76056.34/min [190000], rate=78082.19/min [200000], rate=78947.37/min [210000], rate=80254.78/min [220000], rate=80981.60/min [230000], rate=82142.86/min [240000], rate=83236.99/min [250000], rate=83798.88/min [260000], rate=85245.90/min [270000], rate=86631.02/min [280000], rate=87500.00/min [290000], rate=89230.77/min [300000], rate=90000.00/min [310000], rate=88995.22/min [320000], rate=88888.89/min [330000], rate=88789.24/min [340000], rate=88695.65/min [350000], rate=88983.05/min [360000], rate=89256.20/min [370000], rate=89516.13/min [380000], rate=90118.58/min [390000], rate=90697.67/min [400000], rate=91254.75/min [410000], rate=91791.04/min [420000], rate=92647.06/min [430000], rate=92473.12/min [440000], rate=92957.75/min [450000], rate=93103.45/min [460000], rate=94197.95/min [470000], rate=95593.22/min [480000], rate=97297.30/min [490000], rate=98989.90/min [500000], rate=100671.14/min [510000], rate=102341.14/min [520000], rate=102970.30/min [530000], rate=103921.57/min [540000], rate=104854.37/min [550000], rate=104761.90/min [560000], rate=105000.00/min [570000], rate=106211.18/min [580000], rate=106422.02/min [590000], rate=106626.51/min [600000], rate=106824.93/min [610000], rate=107647.06/min [620000], rate=108139.53/min [630000], rate=108000.00/min [640000], rate=108474.58/min [650000], rate=109243.70/min [660000], rate=109090.91/min [670000], rate=108943.09/min [680000], rate=108510.64/min [690000], rate=108093.99/min [700000], rate=108808.29/min [710000], rate=109230.77/min [720000], rate=109923.66/min [730000], rate=110050.25/min [740000], rate=110173.70/min [750000], rate=110837.44/min [760000], rate=111219.51/min [770000], rate=111325.30/min [780000], rate=110900.47/min [790000], rate=111007.03/min [800000], rate=111888.11/min [810000], rate=112761.02/min [820000], rate=113888.89/min [830000], rate=115277.78/min [840000], rate=116397.23/min [850000], rate=117241.38/min [860000], rate=117808.22/min [870000], rate=118367.35/min [880000], rate=118651.69/min [890000], rate=118403.55/min [900000], rate=118681.32/min [910000], rate=119213.97/min [920000], rate=118965.52/min [930000], rate=118976.55/min [940000], rate=119491.53/min [950000], rate=119747.90/min [960000], rate=119502.07/min [970000], rate=119507.19/min [980000], rate=120000.00/min [990000], rate=120731.71/min [1000000], rate=121703.85/min [1010000], rate=122672.06/min [1020000], rate=122891.57/min [1030000], rate=122619.05/min [1040000], rate=122593.32/min [1050000], rate=121856.87/min [1060000], rate=121839.08/min [1070000], rate=122053.23/min [1080000], rate=122495.27/min [1090000], rate=122701.69/min [1100000], rate=122676.58/min [1110000], rate=122651.93/min [1120000], rate=122627.74/min [1130000], rate=121942.45/min [1140000], rate=122580.65/min [1150000], rate=123434.70/min [1160000], rate=123843.42/min [1170000], rate=123809.52/min [1180000], rate=124428.82/min [1190000], rate=124173.91/min [1200000], rate=124352.33/min [1210000], rate=124315.07/min [1220000], rate=124914.68/min [1230000], rate=124873.10/min [1240000], rate=124414.72/min [1250000], rate=124378.11/min [1260000], rate=124137.93/min [1270000], rate=124306.69/min [1280000], rate=124675.32/min [1290000], rate=124838.71/min [1300000], rate=124203.82/min [1310000], rate=123779.53/min [1320000], rate=123556.94/min [1330000], rate=123148.15/min [1340000], rate=122935.78/min [1350000], rate=122541.60/min [1360000], rate=122522.52/min [1370000], rate=122503.73/min [1380000], rate=122485.21/min [1390000], rate=122287.39/min [1400000], rate=122270.74/min [1410000], rate=119830.03/min [1420000], rate=117193.95/min [1430000], rate=115789.47/min [1440000], rate=115046.60/min [1450000], rate=113428.94/min [1460000], rate=112163.89/min [1470000], rate=110526.32/min [1480000], rate=108957.06/min [1490000], rate=107451.92/min [1500000], rate=106761.57/min [1510000], rate=106338.03/min [1520000], rate=105923.34/min [1530000], rate=105275.23/min [1540000], rate=105000.00/min [1550000], rate=104494.38/min [1560000], rate=104231.63/min [1570000], rate=104203.54/min [1580000], rate=103833.52/min [1590000], rate=103470.72/min [1600000], rate=103225.81/min [1610000], rate=103205.13/min [1620000], rate=103075.29/min [1630000], rate=103164.56/min [1640000], rate=103361.34/min [1650000], rate=103448.28/min [1660000], rate=103750.00/min [1670000], rate=104049.84/min [1680000], rate=104347.83/min [1690000], rate=103680.98/min [1700000], rate=102926.34/min [1710000], rate=102089.55/min [1720000], rate=101474.93/min [1730000], rate=100874.64/min [1740000], rate=100967.12/min [1750000], rate=100574.71/min [1760000], rate=100284.90/min [1770000], rate=100000.00/min [1780000], rate=100000.00/min [1790000], rate=99814.13/min [1800000], rate=99722.99/min [1810000], rate=99816.18/min [1820000], rate=99908.51/min [1830000], rate=99909.01/min [1840000], rate=99909.50/min [1850000], rate=100090.17/min [1860000], rate=99910.47/min [1870000], rate=99204.24/min [1880000], rate=98515.28/min [1890000], rate=98012.10/min [1900000], rate=97435.90/min -building interval tree based on /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=44444.44/min [30000], rate=46153.85/min [40000], rate=48979.59/min [50000], rate=50847.46/min [60000], rate=52941.18/min [70000], rate=56000.00/min [80000], rate=57831.33/min [90000], rate=58695.65/min [100000], rate=61224.49/min [110000], rate=62857.14/min [120000], rate=64285.71/min [130000], rate=66101.69/min [140000], rate=67741.94/min [150000], rate=70312.50/min [160000], rate=73846.15/min [170000], rate=71328.67/min [180000], rate=67924.53/min [190000], rate=65517.24/min [200000], rate=64516.13/min [210000], rate=62068.97/min [220000], rate=60273.97/min [230000], rate=58723.40/min [240000], rate=57600.00/min [250000], rate=57251.91/min [260000], rate=57352.94/min [270000], rate=57446.81/min [280000], rate=57931.03/min [290000], rate=57615.89/min [300000], rate=58064.52/min [310000], rate=58307.21/min [320000], rate=58536.59/min [330000], rate=59104.48/min [340000], rate=59475.22/min [350000], rate=60869.57/min [360000], rate=62247.84/min [370000], rate=63610.32/min [380000], rate=64225.35/min [390000], rate=65000.00/min [400000], rate=65753.42/min [410000], rate=66666.67/min [420000], rate=67379.68/min [430000], rate=68073.88/min [440000], rate=68750.00/min [450000], rate=66997.52/min [460000], rate=65714.29/min [470000], rate=64530.89/min [480000], rate=63157.89/min [490000], rate=63090.13/min [500000], rate=62500.00/min [510000], rate=62195.12/min [520000], rate=62027.83/min [530000], rate=61988.30/min [540000], rate=62427.75/min [550000], rate=62500.00/min [560000], rate=62569.83/min [570000], rate=62522.85/min [580000], rate=62254.03/min [590000], rate=62214.41/min [600000], rate=62283.74/min [610000], rate=62350.94/min [620000], rate=62626.26/min [630000], rate=63000.00/min [640000], rate=63366.34/min [650000], rate=63934.43/min [660000], rate=64285.71/min [670000], rate=64630.23/min [680000], rate=64968.15/min [690000], rate=65506.33/min [700000], rate=65934.07/min [710000], rate=66355.14/min [720000], rate=66666.67/min [730000], rate=67075.04/min [740000], rate=67477.20/min [750000], rate=67873.30/min [760000], rate=68161.43/min [770000], rate=68444.44/min [780000], rate=68823.53/min [790000], rate=68995.63/min [800000], rate=69364.16/min [810000], rate=69627.51/min [820000], rate=69886.36/min [830000], rate=70140.85/min [840000], rate=70489.51/min [850000], rate=70931.85/min [860000], rate=71270.72/min [870000], rate=71506.85/min [880000], rate=71739.13/min [890000], rate=72162.16/min [900000], rate=72580.65/min [910000], rate=72800.00/min [920000], rate=73112.58/min [930000], rate=73324.57/min [940000], rate=73533.25/min [950000], rate=73738.68/min [960000], rate=73940.95/min [970000], rate=74234.69/min [980000], rate=74430.38/min [990000], rate=74623.12/min [1000000], rate=74906.37/min [1010000], rate=75186.10/min [1020000], rate=75462.39/min [1030000], rate=75642.59/min [1040000], rate=75912.41/min [1050000], rate=76086.96/min [1060000], rate=76076.56/min [1070000], rate=76337.69/min [1080000], rate=76415.09/min [1090000], rate=76491.23/min [1100000], rate=76655.05/min [1110000], rate=76816.61/min [1120000], rate=76887.87/min [1130000], rate=77397.26/min [1140000], rate=77551.02/min [1150000], rate=77966.10/min [1160000], rate=78202.25/min [1170000], rate=78435.75/min [1180000], rate=78405.32/min [1190000], rate=78032.79/min [1200000], rate=77837.84/min [1210000], rate=77481.32/min [1220000], rate=77052.63/min [1230000], rate=76955.16/min [1240000], rate=76938.99/min [1250000], rate=76923.08/min [1260000], rate=76985.74/min [1270000], rate=77047.52/min [1280000], rate=77185.93/min [1290000], rate=77322.68/min [1300000], rate=77534.79/min [1310000], rate=77976.19/min [1320000], rate=78415.84/min [1330000], rate=78853.75/min [1340000], rate=79289.94/min [1350000], rate=79724.41/min [1360000], rate=80235.99/min [1370000], rate=80588.24/min [1380000], rate=80859.38/min [1390000], rate=80892.34/min [1400000], rate=80846.97/min [1410000], rate=80494.77/min [1420000], rate=80453.26/min [1430000], rate=80337.08/min [1440000], rate=79925.99/min [1450000], rate=79816.51/min [1460000], rate=79854.15/min [1470000], rate=79674.80/min [1480000], rate=79641.26/min [1490000], rate=79608.19/min [1500000], rate=79646.02/min [1510000], rate=79753.52/min [1520000], rate=79790.03/min [1530000], rate=79895.56/min [1540000], rate=80069.32/min [1550000], rate=80241.59/min [1560000], rate=80550.77/min [1570000], rate=80997.42/min [1580000], rate=81443.30/min [1590000], rate=81748.07/min [1600000], rate=81911.26/min [1610000], rate=82142.86/min [1620000], rate=82303.13/min [1630000], rate=82601.35/min [1640000], rate=82619.65/min [1650000], rate=82500.00/min [1660000], rate=82518.64/min [1670000], rate=82469.14/min [1680000], rate=82555.28/min [1690000], rate=82707.99/min [1700000], rate=82658.02/min [1710000], rate=82608.70/min [1720000], rate=82692.31/min [1730000], rate=82775.12/min [1740000], rate=82857.14/min [1750000], rate=83003.95/min [1760000], rate=83215.13/min [1770000], rate=83359.50/min [1780000], rate=83502.74/min [1790000], rate=83710.05/min [1800000], rate=84112.15/min [1810000], rate=84447.90/min [1820000], rate=84716.83/min [1830000], rate=84918.79/min [1840000], rate=85119.51/min [1850000], rate=85253.46/min [1860000], rate=85321.10/min [1870000], rate=85518.29/min [1880000], rate=85649.20/min -building interval tree based on /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=133333.33/min [30000], rate=112500.00/min [40000], rate=114285.71/min [50000], rate=125000.00/min [60000], rate=128571.43/min [70000], rate=127272.73/min [80000], rate=129729.73/min [90000], rate=131707.32/min [100000], rate=133333.33/min [110000], rate=126923.08/min [120000], rate=135849.06/min [130000], rate=147169.81/min [140000], rate=152727.27/min [150000], rate=152542.37/min [160000], rate=160000.00/min [170000], rate=159375.00/min [180000], rate=158823.53/min [190000], rate=158333.33/min [200000], rate=164383.56/min [210000], rate=170270.27/min [220000], rate=178378.38/min [230000], rate=181578.95/min [240000], rate=177777.78/min [250000], rate=178571.43/min [260000], rate=171428.57/min [270000], rate=170526.32/min [280000], rate=171428.57/min [290000], rate=172277.23/min [300000], rate=174757.28/min [310000], rate=173831.78/min [320000], rate=172972.97/min [330000], rate=173684.21/min [340000], rate=170000.00/min [350000], rate=170731.71/min [360000], rate=175609.76/min [370000], rate=179032.26/min [380000], rate=178125.00/min [390000], rate=180000.00/min [400000], rate=180451.13/min [410000], rate=179562.04/min [420000], rate=178723.40/min [430000], rate=181690.14/min [440000], rate=184615.38/min [450000], rate=187500.00/min [460000], rate=190344.83/min [470000], rate=188000.00/min [480000], rate=187012.99/min [490000], rate=186075.95/min [500000], rate=181818.18/min [510000], rate=183233.53/min [520000], rate=183529.41/min [530000], rate=184883.72/min [540000], rate=185142.86/min [550000], rate=183333.33/min [560000], rate=183606.56/min [570000], rate=184864.86/min [580000], rate=185106.38/min [590000], rate=183419.69/min [600000], rate=180904.52/min [610000], rate=180295.57/min [620000], rate=183251.23/min [630000], rate=184390.24/min [640000], rate=184615.38/min [650000], rate=185714.29/min [660000], rate=185915.49/min [670000], rate=186111.11/min [680000], rate=185454.55/min [690000], rate=186486.49/min [700000], rate=185840.71/min [710000], rate=186026.20/min [720000], rate=185407.73/min [730000], rate=182500.00/min [740000], rate=181967.21/min [750000], rate=182186.23/min [760000], rate=182400.00/min [770000], rate=183333.33/min [780000], rate=182812.50/min [790000], rate=182307.69/min [800000], rate=183206.11/min [810000], rate=183396.23/min [820000], rate=182222.22/min [830000], rate=179783.39/min [840000], rate=180000.00/min [850000], rate=182142.86/min [860000], rate=182978.72/min [870000], rate=182517.48/min [880000], rate=183333.33/min [890000], rate=182876.71/min [900000], rate=183050.85/min [910000], rate=183221.48/min [920000], rate=182781.46/min [930000], rate=162209.30/min [940000], rate=148421.05/min [950000], rate=137681.16/min [960000], rate=129147.98/min [970000], rate=122012.58/min [980000], rate=115748.03/min [990000], rate=109594.10/min [1000000], rate=104529.62/min [1010000], rate=101337.79/min [1020000], rate=97763.58/min [1030000], rate=94640.12/min [1040000], rate=91495.60/min [1050000], rate=88732.39/min [1060000], rate=86766.71/min [1070000], rate=84920.63/min [1080000], rate=83505.15/min [1090000], rate=82575.76/min [1100000], rate=81683.17/min [1110000], rate=80923.45/min [1120000], rate=80095.35/min [1130000], rate=79670.98/min [1140000], rate=79075.14/min [1150000], rate=78320.09/min [1160000], rate=77247.50/min [1170000], rate=76805.25/min [1180000], rate=76210.98/min [1190000], rate=75876.73/min [1200000], rate=75235.11/min [1210000], rate=74691.36/min [1220000], rate=74465.92/min [1230000], rate=74470.23/min [1240000], rate=74400.00/min [1250000], rate=74404.76/min [1260000], rate=74336.28/min [1270000], rate=74414.06/min [1280000], rate=74490.79/min [1290000], rate=74710.42/min [1300000], rate=74927.95/min [1310000], rate=75071.63/min [1320000], rate=75285.17/min [1330000], rate=75354.11/min [1340000], rate=75000.00/min [1350000], rate=74792.24/min [1360000], rate=74588.67/min [1370000], rate=74389.14/min [1380000], rate=74326.75/min [1390000], rate=74265.36/min [1400000], rate=74270.56/min [1410000], rate=74210.53/min [1420000], rate=74216.03/min [1430000], rate=74285.71/min [1440000], rate=74354.56/min [1450000], rate=74486.30/min [1460000], rate=74680.31/min [1470000], rate=74809.16/min [1480000], rate=75063.40/min [1490000], rate=75252.53/min [1500000], rate=75503.36/min [1510000], rate=75752.51/min [1520000], rate=76000.00/min [1530000], rate=75493.42/min [1540000], rate=74636.51/min [1550000], rate=74340.53/min [1560000], rate=74050.63/min [1570000], rate=73593.75/min [1580000], rate=73602.48/min [1590000], rate=73271.89/min [1600000], rate=73003.80/min [1610000], rate=72686.23/min [1620000], rate=72645.74/min [1630000], rate=72713.75/min [1640000], rate=72781.07/min [1650000], rate=72580.65/min [1660000], rate=72436.36/min [1670000], rate=72398.84/min [1680000], rate=72413.79/min [1690000], rate=72376.87/min [1700000], rate=72289.16/min [1710000], rate=72253.52/min [1720000], rate=72268.91/min [1730000], rate=72233.82/min [1740000], rate=72299.17/min [1750000], rate=72363.89/min [1760000], rate=72477.69/min [1770000], rate=72590.57/min [1780000], rate=72752.04/min [1790000], rate=72862.96/min [1800000], rate=73022.31/min [1810000], rate=73180.59/min [1820000], rate=73337.81/min [1830000], rate=73543.20/min [1840000], rate=73502.00/min [1850000], rate=73170.73/min [1860000], rate=72656.25/min [1870000], rate=72340.43/min [1880000], rate=72122.76/min -building interval tree based on /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=37500.00/min [30000], rate=37500.00/min [40000], rate=37500.00/min [50000], rate=38961.04/min [60000], rate=38709.68/min [70000], rate=38532.11/min [80000], rate=40336.13/min [90000], rate=42187.50/min [100000], rate=43795.62/min [110000], rate=45517.24/min [120000], rate=47682.12/min [130000], rate=49681.53/min [140000], rate=51533.74/min [150000], rate=53254.44/min [160000], rate=54857.14/min [170000], rate=57303.37/min [180000], rate=59016.39/min [190000], rate=60638.30/min [200000], rate=60913.71/min [210000], rate=61764.71/min [220000], rate=62857.14/min [230000], rate=64186.05/min [240000], rate=65454.55/min [250000], rate=66964.29/min [260000], rate=67826.09/min [270000], rate=68354.43/min [280000], rate=66666.67/min [290000], rate=65660.38/min [300000], rate=65217.39/min [310000], rate=64137.93/min [320000], rate=64214.05/min [330000], rate=64285.71/min [340000], rate=64353.31/min [350000], rate=64814.81/min [360000], rate=65454.55/min [370000], rate=66071.43/min [380000], rate=66862.17/min [390000], rate=67630.06/min [400000], rate=68376.07/min [410000], rate=69101.12/min [420000], rate=70194.99/min [430000], rate=71468.14/min [440000], rate=72527.47/min [450000], rate=73770.49/min [460000], rate=73994.64/min [470000], rate=73437.50/min [480000], rate=72727.27/min [490000], rate=72235.87/min [500000], rate=71770.33/min [510000], rate=72511.85/min [520000], rate=73411.76/min [530000], rate=74299.07/min [540000], rate=74141.88/min [550000], rate=74157.30/min [560000], rate=74008.81/min [570000], rate=74186.55/min [580000], rate=74518.20/min [590000], rate=74841.44/min [600000], rate=75313.81/min [610000], rate=76250.00/min [620000], rate=76701.03/min [630000], rate=77142.86/min [640000], rate=77732.79/min [650000], rate=78313.25/min [660000], rate=76595.74/min [670000], rate=74860.34/min [680000], rate=73513.51/min [690000], rate=73534.64/min [700000], rate=74074.07/min [710000], rate=73070.33/min [720000], rate=72120.20/min [730000], rate=71335.50/min [740000], rate=71040.00/min [750000], rate=70643.64/min [760000], rate=70479.13/min [770000], rate=69578.31/min [780000], rate=68521.23/min [790000], rate=67811.16/min [800000], rate=67132.87/min [810000], rate=66666.67/min [820000], rate=66129.03/min [830000], rate=65526.32/min [840000], rate=64948.45/min [850000], rate=64885.50/min [860000], rate=64824.12/min [870000], rate=64844.72/min [880000], rate=64547.68/min [890000], rate=64337.35/min [900000], rate=64285.71/min [910000], rate=64310.95/min [920000], rate=64111.50/min [930000], rate=64137.93/min [940000], rate=63945.58/min [950000], rate=63901.35/min [960000], rate=63858.09/min [970000], rate=63885.84/min [980000], rate=63843.65/min [990000], rate=63802.36/min [1000000], rate=63829.79/min [1010000], rate=63789.47/min [1020000], rate=63883.09/min [1030000], rate=63975.16/min [1040000], rate=64131.55/min [1050000], rate=64351.38/min [1060000], rate=64568.53/min [1070000], rate=64848.48/min [1080000], rate=65191.15/min [1090000], rate=65728.64/min [1100000], rate=66000.00/min [1110000], rate=66334.66/min [1120000], rate=65882.35/min [1130000], rate=65129.68/min [1140000], rate=64346.19/min [1150000], rate=63948.10/min [1160000], rate=63445.76/min [1170000], rate=63016.16/min [1180000], rate=62654.87/min [1190000], rate=62249.35/min [1200000], rate=62122.52/min [1210000], rate=61998.29/min [1220000], rate=61876.58/min [1230000], rate=61860.85/min [1240000], rate=61691.54/min [1250000], rate=61677.63/min [1260000], rate=61714.29/min [1270000], rate=61800.49/min [1280000], rate=61835.75/min [1290000], rate=61821.09/min [1300000], rate=61953.93/min [1310000], rate=62085.31/min [1320000], rate=62264.15/min [1330000], rate=62441.31/min [1340000], rate=62616.82/min [1350000], rate=62888.20/min [1360000], rate=63060.28/min [1370000], rate=63328.20/min [1380000], rate=63448.28/min [1390000], rate=63567.07/min [1400000], rate=63926.94/min [1410000], rate=64285.71/min [1420000], rate=64692.48/min [1430000], rate=64852.61/min [1440000], rate=65060.24/min [1450000], rate=65266.32/min [1460000], rate=65470.85/min [1470000], rate=65478.84/min [1480000], rate=64864.86/min [1490000], rate=64595.38/min [1500000], rate=64102.56/min [1510000], rate=63713.08/min [1520000], rate=63377.35/min [1530000], rate=63136.18/min [1540000], rate=63157.89/min [1550000], rate=63394.68/min [1560000], rate=63243.24/min [1570000], rate=63136.73/min [1580000], rate=63115.85/min [1590000], rate=63011.89/min [1600000], rate=62992.13/min [1610000], rate=63013.70/min [1620000], rate=63035.02/min [1630000], rate=63056.09/min [1640000], rate=63076.92/min [1650000], rate=63137.76/min [1660000], rate=63238.10/min [1670000], rate=63337.55/min [1680000], rate=63436.12/min [1690000], rate=63533.83/min [1700000], rate=63670.41/min [1710000], rate=63805.97/min [1720000], rate=63940.52/min [1730000], rate=64074.07/min [1740000], rate=64246.15/min [1750000], rate=64377.68/min [1760000], rate=64587.16/min [1770000], rate=64795.61/min [1780000], rate=64805.83/min [1790000], rate=64620.94/min [1800000], rate=64516.13/min [1810000], rate=64374.63/min [1820000], rate=64310.95/min [1830000], rate=64248.10/min [1840000], rate=64186.05/min [1850000], rate=64124.78/min [1860000], rate=64101.09/min [1870000], rate=64114.29/min [1880000], rate=64090.91/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir --filt_file /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 12000000.00 reads per min processed... 10800000.00 reads per min processed... 10000000.00 reads per min processed... 8250000.00 reads per min processed... 8000000.00 reads per min processed... 7090909.09 reads per min processed... 7000000.00 reads per min processed... 6923076.92 reads per min processed... 6857142.86 reads per min processed... 6375000.00 reads per min processed... 6352941.18 reads per min processed... 6333333.33 reads per min processed... 6315789.47 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5750000.00 reads per min processed... 5760000.00 reads per min processed... 5555555.56 reads per min processed... 5379310.34 reads per min processed... 5400000.00 reads per min processed... 5250000.00 reads per min processed... 5272727.27 reads per min processed... 5294117.65 reads per min processed... 5314285.71 reads per min processed... 5189189.19 reads per min processed... 5210526.32 reads per min processed... 5230769.23 reads per min processed... 5250000.00 reads per min processed... 5268292.68 reads per min processed... 5285714.29 reads per min processed... 5302325.58 reads per min processed... 5441860.47 reads per min processed... 5454545.45 reads per min processed... 5466666.67 reads per min processed... 5600000.00 reads per min processed... 5608695.65 reads per min processed... 5739130.43 reads per min processed... 5744680.85 reads per min processed... 5632653.06 reads per min processed... 5640000.00 reads per min processed... 5647058.82 reads per min processed... 5653846.15 reads per min processed... 5660377.36 reads per min processed... 5563636.36 reads per min processed... 5571428.57 reads per min processed... 5578947.37 reads per min processed... 5586206.90 reads per min processed... 5593220.34 reads per min processed... 5508196.72 reads per min processed... 5428571.43 reads per min processed... 5437500.00 reads per min processed... 5363636.36 reads per min processed... 5294117.65 reads per min processed... 5304347.83 reads per min processed... 5314285.71 reads per min processed... 5250000.00 reads per min processed... 5260273.97 reads per min processed... 5270270.27 reads per min processed... 5280000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.AWyLpE06cx/EndoN_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -98408.023865 EM: Round [1] log likelihood: -98171.725557 EM: Round [2] log likelihood: -98077.328480 EM: Round [3] log likelihood: -98032.107885 EM: Round [4] log likelihood: -98008.329429 EM: Round [5] log likelihood: -97995.063661 EM: Round [6] log likelihood: -97987.306590 EM: Round [7] log likelihood: -97982.572310 EM: Round [8] log likelihood: -97979.564193 EM: Round [9] log likelihood: -97977.580400 EM: Round [10] log likelihood: -97976.227400 EM: Round [11] log likelihood: -97975.276589 EM: Round [12] log likelihood: -97974.590511 EM: Round [13] log likelihood: -97974.083779 EM: Round [14] log likelihood: -97973.701726 EM: Round [15] log likelihood: -97973.408376 EM: Round [16] log likelihood: -97973.179449 EM: Round [17] log likelihood: -97972.998184 EM: Round [18] log likelihood: -97972.852770 EM: Round [19] log likelihood: -97972.734731 EM: Round [20] log likelihood: -97972.637882 EM: Round [21] log likelihood: -97972.557640 EM: Round [22] log likelihood: -97972.490561 EM: Round [23] log likelihood: -97972.434028 EM: Round [24] log likelihood: -97972.386026 EM: Round [25] log likelihood: -97972.344987 EM: Round [26] log likelihood: -97972.309680 EM: Round [27] log likelihood: -97972.279129 EM: Round [28] log likelihood: -97972.252551 EM: Round [29] log likelihood: -97972.229318 EM: Round [30] log likelihood: -97972.208915 EM: Round [31] log likelihood: -97972.190924 EM: Round [32] log likelihood: -97972.174997 EM: Round [33] log likelihood: -97972.160849 EM: Round [34] log likelihood: -97972.148237 EM: Round [35] log likelihood: -97972.136962 EM: Round [36] log likelihood: -97972.126851 EM: Round [37] log likelihood: -97972.117761 EM: Round [38] log likelihood: -97972.109568 EM: Round [39] log likelihood: -97972.102166 EM: Round [40] log likelihood: -97972.095464 EM: Round [41] log likelihood: -97972.089382 EM: Round [42] log likelihood: -97972.083853 EM: Round [43] log likelihood: -97972.078817 EM: Round [44] log likelihood: -97972.074221 EM: Round [45] log likelihood: -97972.070021 EM: Round [46] log likelihood: -97972.066175 EM: Round [47] log likelihood: -97972.062648 EM: Round [48] log likelihood: -97972.059409 EM: Round [49] log likelihood: -97972.056430 EM: Round [50] log likelihood: -97972.053686 EM: Round [51] log likelihood: -97972.051156 EM: Round [52] log likelihood: -97972.048819 EM: Round [53] log likelihood: -97972.046658 EM: Round [54] log likelihood: -97972.044657 EM: Round [55] log likelihood: -97972.042803 EM: Round [56] log likelihood: -97972.041082 EM: Round [57] log likelihood: -97972.039482 EM: Round [58] log likelihood: -97972.037995 EM: Round [59] log likelihood: -97972.036610 EM: Round [60] log likelihood: -97972.035318 EM: Round [61] log likelihood: -97972.034113 EM: Round [62] log likelihood: -97972.032987 EM: Round [63] log likelihood: -97972.031934 EM: Round [64] log likelihood: -97972.030948 EM: Round [65] log likelihood: -97972.030024 EM: Round [66] log likelihood: -97972.029157 EM: Round [67] log likelihood: -97972.028344 EM: Round [68] log likelihood: -97972.027579 EM: Round [69] log likelihood: -97972.026860 EM: Round [70] log likelihood: -97972.026183 EM: Round [71] log likelihood: -97972.025544 EM: Round [72] log likelihood: -97972.024942 EM: Round [73] log likelihood: -97972.024374 EM: Round [74] log likelihood: -97972.023837 EM: Round [75] log likelihood: -97972.023330 EM: Round [76] log likelihood: -97972.022849 EM: Round [77] log likelihood: -97972.022394 EM: Round [78] log likelihood: -97972.021963 EM: Round [79] log likelihood: -97972.021554 EM: Round [80] log likelihood: -97972.021166 EM: Round [81] log likelihood: -97972.020797 EM: Round [82] log likelihood: -97972.020446 EM: Round [83] log likelihood: -97972.020113 EM: Round [84] log likelihood: -97972.019795 EM: Round [85] log likelihood: -97972.019493 EM: Round [86] log likelihood: -97972.019205 EM: Round [87] log likelihood: -97972.018930 EM: Round [88] log likelihood: -97972.018667 EM: Round [89] log likelihood: -97972.018417 EM: Round [90] log likelihood: -97972.018177 EM: Round [91] log likelihood: -97972.017948 EM: Round [92] log likelihood: -97972.017729 EM: Round [93] log likelihood: -97972.017520 EM: Round [94] log likelihood: -97972.017319 EM: Round [95] log likelihood: -97972.017126 EM: Round [96] log likelihood: -97972.016942 EM: Round [97] log likelihood: -97972.016765 EM: Round [98] log likelihood: -97972.016595 EM: Round [99] log likelihood: -97972.016432 EM: Round [100] log likelihood: -97972.016276 EM: Round [101] log likelihood: -97972.016125 EM: Round [102] log likelihood: -97972.015981 EM: Round [103] log likelihood: -97972.015842 EM: Round [104] log likelihood: -97972.015708 EM: Round [105] log likelihood: -97972.015579 EM: Round [106] log likelihood: -97972.015455 EM: Round [107] log likelihood: -97972.015335 EM: Round [108] log likelihood: -97972.015220 EM: Round [109] log likelihood: -97972.015109 EM: Round [110] log likelihood: -97972.015001 EM: Round [111] log likelihood: -97972.014898 EM: Round [112] log likelihood: -97972.014798 EM: Stopping iterations at round 112 due to insufficient improvement in likelihood. EM: Starting log likelihood: -98326.667764 EM: Round [1] log likelihood: -98121.381012 EM: Round [2] log likelihood: -98043.532115 EM: Round [3] log likelihood: -98007.445353 EM: Round [4] log likelihood: -97988.883209 EM: Round [5] log likelihood: -97978.698187 EM: Round [6] log likelihood: -97972.828717 EM: Round [7] log likelihood: -97969.295393 EM: Round [8] log likelihood: -97967.079114 EM: Round [9] log likelihood: -97965.634484 EM: Round [10] log likelihood: -97964.659214 EM: Round [11] log likelihood: -97963.979796 EM: Round [12] log likelihood: -97963.493137 EM: Round [13] log likelihood: -97963.135915 EM: Round [14] log likelihood: -97962.867997 EM: Round [15] log likelihood: -97962.663209 EM: Round [16] log likelihood: -97962.504023 EM: Round [17] log likelihood: -97962.378418 EM: Round [18] log likelihood: -97962.277973 EM: Round [19] log likelihood: -97962.196672 EM: Round [20] log likelihood: -97962.130144 EM: Round [21] log likelihood: -97962.075164 EM: Round [22] log likelihood: -97962.029316 EM: Round [23] log likelihood: -97961.990766 EM: Round [24] log likelihood: -97961.958110 EM: Round [25] log likelihood: -97961.930255 EM: Round [26] log likelihood: -97961.906345 EM: Round [27] log likelihood: -97961.885702 EM: Round [28] log likelihood: -97961.867785 EM: Round [29] log likelihood: -97961.852158 EM: Round [30] log likelihood: -97961.838465 EM: Round [31] log likelihood: -97961.826418 EM: Round [32] log likelihood: -97961.815777 EM: Round [33] log likelihood: -97961.806345 EM: Round [34] log likelihood: -97961.797955 EM: Round [35] log likelihood: -97961.790470 EM: Round [36] log likelihood: -97961.783773 EM: Round [37] log likelihood: -97961.777763 EM: Round [38] log likelihood: -97961.772357 EM: Round [39] log likelihood: -97961.767481 EM: Round [40] log likelihood: -97961.763074 EM: Round [41] log likelihood: -97961.759082 EM: Round [42] log likelihood: -97961.755458 EM: Round [43] log likelihood: -97961.752162 EM: Round [44] log likelihood: -97961.749158 EM: Round [45] log likelihood: -97961.746415 EM: Round [46] log likelihood: -97961.743906 EM: Round [47] log likelihood: -97961.741607 EM: Round [48] log likelihood: -97961.739497 EM: Round [49] log likelihood: -97961.737557 EM: Round [50] log likelihood: -97961.735771 EM: Round [51] log likelihood: -97961.734123 EM: Round [52] log likelihood: -97961.732602 EM: Round [53] log likelihood: -97961.731194 EM: Round [54] log likelihood: -97961.729891 EM: Round [55] log likelihood: -97961.728681 EM: Round [56] log likelihood: -97961.727558 EM: Round [57] log likelihood: -97961.726513 EM: Round [58] log likelihood: -97961.725540 EM: Round [59] log likelihood: -97961.724632 EM: Round [60] log likelihood: -97961.723784 EM: Round [61] log likelihood: -97961.722991 EM: Round [62] log likelihood: -97961.722248 EM: Round [63] log likelihood: -97961.721552 EM: Round [64] log likelihood: -97961.720899 EM: Round [65] log likelihood: -97961.720285 EM: Round [66] log likelihood: -97961.719707 EM: Round [67] log likelihood: -97961.719164 EM: Round [68] log likelihood: -97961.718651 EM: Round [69] log likelihood: -97961.718167 EM: Round [70] log likelihood: -97961.717709 EM: Round [71] log likelihood: -97961.717277 EM: Round [72] log likelihood: -97961.716867 EM: Round [73] log likelihood: -97961.716479 EM: Round [74] log likelihood: -97961.716111 EM: Round [75] log likelihood: -97961.715761 EM: Round [76] log likelihood: -97961.715428 EM: Round [77] log likelihood: -97961.715112 EM: Round [78] log likelihood: -97961.714811 EM: Round [79] log likelihood: -97961.714525 EM: Round [80] log likelihood: -97961.714251 EM: Round [81] log likelihood: -97961.713990 EM: Round [82] log likelihood: -97961.713741 EM: Round [83] log likelihood: -97961.713503 EM: Round [84] log likelihood: -97961.713275 EM: Round [85] log likelihood: -97961.713057 EM: Round [86] log likelihood: -97961.712848 EM: Round [87] log likelihood: -97961.712648 EM: Round [88] log likelihood: -97961.712456 EM: Round [89] log likelihood: -97961.712272 EM: Round [90] log likelihood: -97961.712095 EM: Round [91] log likelihood: -97961.711926 EM: Round [92] log likelihood: -97961.711763 EM: Round [93] log likelihood: -97961.711606 EM: Round [94] log likelihood: -97961.711455 EM: Round [95] log likelihood: -97961.711310 EM: Round [96] log likelihood: -97961.711170 EM: Round [97] log likelihood: -97961.711035 EM: Round [98] log likelihood: -97961.710905 EM: Round [99] log likelihood: -97961.710780 EM: Round [100] log likelihood: -97961.710659 EM: Round [101] log likelihood: -97961.710542 EM: Round [102] log likelihood: -97961.710430 EM: Round [103] log likelihood: -97961.710321 EM: Round [104] log likelihood: -97961.710216 EM: Round [105] log likelihood: -97961.710115 EM: Round [106] log likelihood: -97961.710016 EM: Stopping iterations at round 106 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 104792775 > /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir > /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir --annotate /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir -done, see /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 434, filtered: 4933) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.AWyLpE06cx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.AWyLpE06cx/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000225265.2] WARNING, no entry stored in dbm for [ENSG00000240350.3] WARNING, no entry stored in dbm for [ENSG00000214765.8] WARNING, no entry stored in dbm for [ENSG00000284130.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000088340.17] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000205231.1] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000283907.1] WARNING, no entry stored in dbm for [ENSG00000231875.1] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000228889.7] WARNING, no entry stored in dbm for [ENSG00000267226.2] WARNING, no entry stored in dbm for [ENSG00000200434.1] WARNING, no entry stored in dbm for [ENSG00000283291.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000231367.6] WARNING, no entry stored in dbm for [ENSG00000205634.7] WARNING, no entry stored in dbm for [ENSG00000277558.1] WARNING, no entry stored in dbm for [ENSG00000273599.1] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000255438.2] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000260034.1] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000244313.3] WARNING, no entry stored in dbm for [ENSG00000224861.1] WARNING, no entry stored in dbm for [ENSG00000235804.2] WARNING, no entry stored in dbm for [ENSG00000248755.1] WARNING, no entry stored in dbm for [ENSG00000218300.1] WARNING, no entry stored in dbm for [ENSG00000213178.3] WARNING, no entry stored in dbm for [ENSG00000218716.1] WARNING, no entry stored in dbm for [ENSG00000206888.1] WARNING, no entry stored in dbm for [ENSG00000231841.1] WARNING, no entry stored in dbm for [ENSG00000207357.1] WARNING, no entry stored in dbm for [ENSG00000231841.1] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000252965.1] WARNING, no entry stored in dbm for [ENSG00000244392.3] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000202406.1] WARNING, no entry stored in dbm for [ENSG00000223341.1] WARNING, no entry stored in dbm for [ENSG00000248100.2] WARNING, no entry stored in dbm for [ENSG00000284391.1] WARNING, no entry stored in dbm for [ENSG00000254842.6] WARNING, no entry stored in dbm for [ENSG00000254842.6] WARNING, no entry stored in dbm for [ENSG00000257336.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000273792.1] WARNING, no entry stored in dbm for [ENSG00000261713.6] WARNING, no entry stored in dbm for [ENSG00000215417.13] WARNING, no entry stored in dbm for [ENSG00000254400.1] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000249996.1] WARNING, no entry stored in dbm for [ENSG00000189223.15] WARNING, no entry stored in dbm for [ENSG00000255875.2] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000286907.1] WARNING, no entry stored in dbm for [ENSG00000241743.4] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000186301.8] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [ENSG00000271013.1] WARNING, no entry stored in dbm for [ENSG00000254109.6] WARNING, no entry stored in dbm for [ENSG00000235519.3] WARNING, no entry stored in dbm for [ENSG00000276131.1] WARNING, no entry stored in dbm for [ENSG00000231437.3] WARNING, no entry stored in dbm for [ENSG00000239921.6] WARNING, no entry stored in dbm for [ENSG00000266979.1] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000269821.1] WARNING, no entry stored in dbm for [ENSG00000269821.1] WARNING, no entry stored in dbm for [ENSG00000250155.2] WARNING, no entry stored in dbm for [ENSG00000267233.1] WARNING, no entry stored in dbm for [ENSG00000260689.2] WARNING, no entry stored in dbm for [ENSG00000267729.1] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000198237.8] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000247011.2] WARNING, no entry stored in dbm for [ENSG00000205333.5] WARNING, no entry stored in dbm for [ENSG00000249375.8] WARNING, no entry stored in dbm for [ENSG00000213338.3] WARNING, no entry stored in dbm for [ENSG00000279647.1] WARNING, no entry stored in dbm for [ENSG00000257167.2] WARNING, no entry stored in dbm for [ENSG00000246339.6] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000229140.11] WARNING, no entry stored in dbm for [ENSG00000231615.2] WARNING, no entry stored in dbm for [ENSG00000273297.2] WARNING, no entry stored in dbm for [ENSG00000275110.1] WARNING, no entry stored in dbm for [ENSG00000226026.6] WARNING, no entry stored in dbm for [ENSG00000286551.1] WARNING, no entry stored in dbm for [ENSG00000230666.5] WARNING, no entry stored in dbm for [ENSG00000251264.1] WARNING, no entry stored in dbm for [ENSG00000273599.1] WARNING, no entry stored in dbm for [ENSG00000198590.12] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000279021.1] WARNING, no entry stored in dbm for [ENSG00000229405.1] WARNING, no entry stored in dbm for [ENSG00000251143.1] WARNING, no entry stored in dbm for [ENSG00000286643.1] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000271931.1] WARNING, no entry stored in dbm for [ENSG00000230912.1] WARNING, no entry stored in dbm for [ENSG00000230417.12] WARNING, no entry stored in dbm for [ENSG00000285062.1] WARNING, no entry stored in dbm for [ENSG00000275140.1] WARNING, no entry stored in dbm for [ENSG00000276850.5] WARNING, no entry stored in dbm for [ENSG00000273598.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000215154.6] WARNING, no entry stored in dbm for [ENSG00000248447.2] WARNING, no entry stored in dbm for [ENSG00000279147.1] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000237877.7] WARNING, no entry stored in dbm for [ENSG00000273472.1] WARNING, no entry stored in dbm for [ENSG00000287101.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000285592.1] WARNING, no entry stored in dbm for [ENSG00000259354.5] WARNING, no entry stored in dbm for [ENSG00000253859.2] WARNING, no entry stored in dbm for [ENSG00000278797.1] WARNING, no entry stored in dbm for [ENSG00000283897.2] WARNING, no entry stored in dbm for [ENSG00000247199.5] WARNING, no entry stored in dbm for [ENSG00000247199.5] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000248560.1] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000273218.1] WARNING, no entry stored in dbm for [ENSG00000247853.2] WARNING, no entry stored in dbm for [ENSG00000267243.6] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000284825.1] * STAR-Fusion complete. See output: /tmp/nxf.AWyLpE06cx/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)