.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (22Rv1_FFPE_RNA_0001_B23LG7FLT4_2)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/edab1fb75282344bac46092810bfd9/.command.out
Size: 735 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (22Rv1_FFPE_RNA_0001_B23LG7FLT4_2)
Attempt

Content

  AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 1
  Pass (FILTER=PASS): 0 (0.0%)
  Fail (FILTER=FAIL): 1 (100.0%)

Failure reasons (top 15):
  total_reads_below_min(2.0<8.0): 1

Breakdown by confidence:
  high: 0 pass, 1 fail (total: 1)
Arriba filter: 1 rows -> 0 PASS; wrote 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filtered.tsv and 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2.arriba.fusions.filter_summary.txt