[W::hts_idx_load3] The index file is older than the data file: 786-O_FFPE_RNA_0001_B23LG7FLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	318294180
Known Splicing Events:	315860412
Partial Novel Splicing Events:	1651774
Novel Splicing Events:	693841
Filtered Splicing Events:	88153

Total splicing  Junctions:	630756
Known Splicing Junctions:	281784
Partial Novel Splicing Junctions:	189673
Novel Splicing Junctions:	159299

===================================================================
Create BED file ...
Create Interact file ...