Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/5dad36c70ea23c9ee142dbdb52c7e5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/6cd9c61e24bd9f7d962fa61e48bd12/786-O_FFPE_RNA_0001_B23LG7FLT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/5dad36c70ea23c9ee142dbdb52c7e5/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/6cd9c61e24bd9f7d962fa61e48bd12/786-O_FFPE_RNA_0001_B23LG7FLT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory