Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/d0009e84efb333e809cfb15cc5fbcb/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/7aa3f5a7751cd9cd1f10529cbff77e/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/d0009e84efb333e809cfb15cc5fbcb/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/7aa3f5a7751cd9cd1f10529cbff77e/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/e4f2892bae81f0c3d90764f64bddac/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.ROHHqBURqi/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary
-sample contains 25491735 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir -J /tmp/nxf.ROHHqBURqi/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.ROHHqBURqi/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[560000], rate=38979.12/min -building interval tree based on /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=85714.29/min
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[550000], rate=37542.66/min -building interval tree based on /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[550000], rate=34994.70/min -building interval tree based on /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[550000], rate=32934.13/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir --filt_file /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
4000000.00 reads per min processed...
3600000.00 reads per min processed...
3428571.43 reads per min processed...
3750000.00 reads per min processed...
3600000.00 reads per min processed...
3230769.23 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3157894.74 reads per min processed...
3142857.14 reads per min processed...
3272727.27 reads per min processed...
3391304.35 reads per min processed...
3360000.00 reads per min processed...
3333333.33 reads per min processed...
3428571.43 reads per min processed...
3290322.58 reads per min processed...
3272727.27 reads per min processed...
3257142.86 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.ROHHqBURqi/EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -33006.626047
EM: Round [1] log likelihood: -32937.309059
EM: Round [2] log likelihood: -32909.054121
EM: Round [3] log likelihood: -32895.183486
EM: Round [4] log likelihood: -32887.749422
EM: Round [5] log likelihood: -32883.560993
EM: Round [6] log likelihood: -32881.096889
EM: Round [7] log likelihood: -32879.579564
EM: Round [8] log likelihood: -32878.600283
EM: Round [9] log likelihood: -32877.939285
EM: Round [10] log likelihood: -32877.474999
EM: Round [11] log likelihood: -32877.137787
EM: Round [12] log likelihood: -32876.886169
EM: Round [13] log likelihood: -32876.694396
EM: Round [14] log likelihood: -32876.545807
EM: Round [15] log likelihood: -32876.429187
EM: Round [16] log likelihood: -32876.336709
EM: Round [17] log likelihood: -32876.262746
EM: Round [18] log likelihood: -32876.203153
EM: Round [19] log likelihood: -32876.154819
EM: Round [20] log likelihood: -32876.115375
EM: Round [21] log likelihood: -32876.082999
EM: Round [22] log likelihood: -32876.056276
EM: Round [23] log likelihood: -32876.034100
EM: Round [24] log likelihood: -32876.015601
EM: Round [25] log likelihood: -32876.000093
EM: Round [26] log likelihood: -32875.987028
EM: Round [27] log likelihood: -32875.975968
EM: Round [28] log likelihood: -32875.966564
EM: Round [29] log likelihood: -32875.958533
EM: Round [30] log likelihood: -32875.951644
EM: Round [31] log likelihood: -32875.945711
EM: Round [32] log likelihood: -32875.940580
EM: Round [33] log likelihood: -32875.936128
EM: Round [34] log likelihood: -32875.932249
EM: Round [35] log likelihood: -32875.928858
EM: Round [36] log likelihood: -32875.925883
EM: Round [37] log likelihood: -32875.923264
EM: Round [38] log likelihood: -32875.920952
EM: Round [39] log likelihood: -32875.918904
EM: Round [40] log likelihood: -32875.917085
EM: Round [41] log likelihood: -32875.915465
EM: Round [42] log likelihood: -32875.914017
EM: Round [43] log likelihood: -32875.912720
EM: Round [44] log likelihood: -32875.911555
EM: Round [45] log likelihood: -32875.910506
EM: Round [46] log likelihood: -32875.909560
EM: Round [47] log likelihood: -32875.908704
EM: Round [48] log likelihood: -32875.907928
EM: Round [49] log likelihood: -32875.907222
EM: Round [50] log likelihood: -32875.906580
EM: Round [51] log likelihood: -32875.905995
EM: Round [52] log likelihood: -32875.905459
EM: Round [53] log likelihood: -32875.904969
EM: Round [54] log likelihood: -32875.904519
EM: Round [55] log likelihood: -32875.904106
EM: Round [56] log likelihood: -32875.903725
EM: Round [57] log likelihood: -32875.903374
EM: Round [58] log likelihood: -32875.903051
EM: Round [59] log likelihood: -32875.902751
EM: Round [60] log likelihood: -32875.902474
EM: Round [61] log likelihood: -32875.902217
EM: Round [62] log likelihood: -32875.901979
EM: Round [63] log likelihood: -32875.901757
EM: Round [64] log likelihood: -32875.901551
EM: Round [65] log likelihood: -32875.901359
EM: Round [66] log likelihood: -32875.901180
EM: Round [67] log likelihood: -32875.901013
EM: Round [68] log likelihood: -32875.900857
EM: Round [69] log likelihood: -32875.900711
EM: Round [70] log likelihood: -32875.900575
EM: Round [71] log likelihood: -32875.900447
EM: Round [72] log likelihood: -32875.900327
EM: Round [73] log likelihood: -32875.900215
EM: Round [74] log likelihood: -32875.900109
EM: Round [75] log likelihood: -32875.900010
EM: Stopping iterations at round 75 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -32989.995522
EM: Round [1] log likelihood: -32927.802283
EM: Round [2] log likelihood: -32903.560447
EM: Round [3] log likelihood: -32891.880218
EM: Round [4] log likelihood: -32885.673049
EM: Round [5] log likelihood: -32882.199699
EM: Round [6] log likelihood: -32880.170682
EM: Round [7] log likelihood: -32878.929488
EM: Round [8] log likelihood: -32878.132285
EM: Round [9] log likelihood: -32877.595325
EM: Round [10] log likelihood: -32877.217839
EM: Round [11] log likelihood: -32876.942727
EM: Round [12] log likelihood: -32876.736361
EM: Round [13] log likelihood: -32876.578084
EM: Round [14] log likelihood: -32876.454628
EM: Round [15] log likelihood: -32876.357090
EM: Round [16] log likelihood: -32876.279256
EM: Round [17] log likelihood: -32876.216639
EM: Round [18] log likelihood: -32876.165913
EM: Round [19] log likelihood: -32876.124562
EM: Round [20] log likelihood: -32876.090658
EM: Round [21] log likelihood: -32876.062707
EM: Round [22] log likelihood: -32876.039540
EM: Round [23] log likelihood: -32876.020238
EM: Round [24] log likelihood: -32876.004075
EM: Round [25] log likelihood: -32875.990474
EM: Round [26] log likelihood: -32875.978973
EM: Round [27] log likelihood: -32875.969204
EM: Round [28] log likelihood: -32875.960867
EM: Round [29] log likelihood: -32875.953721
EM: Round [30] log likelihood: -32875.947571
EM: Round [31] log likelihood: -32875.942255
EM: Round [32] log likelihood: -32875.937643
EM: Round [33] log likelihood: -32875.933626
EM: Round [34] log likelihood: -32875.930114
EM: Round [35] log likelihood: -32875.927033
EM: Round [36] log likelihood: -32875.924320
EM: Round [37] log likelihood: -32875.921925
EM: Round [38] log likelihood: -32875.919802
EM: Round [39] log likelihood: -32875.917916
EM: Round [40] log likelihood: -32875.916234
EM: Round [41] log likelihood: -32875.914731
EM: Round [42] log likelihood: -32875.913384
EM: Round [43] log likelihood: -32875.912173
EM: Round [44] log likelihood: -32875.911082
EM: Round [45] log likelihood: -32875.910097
EM: Round [46] log likelihood: -32875.909205
EM: Round [47] log likelihood: -32875.908395
EM: Round [48] log likelihood: -32875.907659
EM: Round [49] log likelihood: -32875.906989
EM: Round [50] log likelihood: -32875.906377
EM: Round [51] log likelihood: -32875.905817
EM: Round [52] log likelihood: -32875.905304
EM: Round [53] log likelihood: -32875.904833
EM: Round [54] log likelihood: -32875.904400
EM: Round [55] log likelihood: -32875.904001
EM: Round [56] log likelihood: -32875.903633
EM: Round [57] log likelihood: -32875.903293
EM: Round [58] log likelihood: -32875.902979
EM: Round [59] log likelihood: -32875.902688
EM: Round [60] log likelihood: -32875.902418
EM: Round [61] log likelihood: -32875.902167
EM: Round [62] log likelihood: -32875.901934
EM: Round [63] log likelihood: -32875.901718
EM: Round [64] log likelihood: -32875.901516
EM: Round [65] log likelihood: -32875.901327
EM: Round [66] log likelihood: -32875.901152
EM: Round [67] log likelihood: -32875.900987
EM: Round [68] log likelihood: -32875.900834
EM: Round [69] log likelihood: -32875.900690
EM: Round [70] log likelihood: -32875.900555
EM: Round [71] log likelihood: -32875.900429
EM: Round [72] log likelihood: -32875.900311
EM: Round [73] log likelihood: -32875.900200
EM: Round [74] log likelihood: -32875.900096
EM: Round [75] log likelihood: -32875.899998
EM: Stopping iterations at round 75 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 25491735 > /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir > /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir --annotate /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir
-done, see /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 193, filtered: 2732)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.ROHHqBURqi/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.ROHHqBURqi/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000265735.2]
WARNING, no entry stored in dbm for [ENSG00000240116.3]
WARNING, no entry stored in dbm for [ENSG00000276168.1]
WARNING, no entry stored in dbm for [ENSG00000240116.3]
WARNING, no entry stored in dbm for [ENSG00000256195.3]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000245067.7]
WARNING, no entry stored in dbm for [ENSG00000214614.3]
WARNING, no entry stored in dbm for [ENSG00000239407.5]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000262445.3]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000287910.1]
WARNING, no entry stored in dbm for [ENSG00000256817.1]
WARNING, no entry stored in dbm for [ENSG00000234782.3]
WARNING, no entry stored in dbm for [ENSG00000280383.1]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000230071.2]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
WARNING, no entry stored in dbm for [ENSG00000283568.1]
WARNING, no entry stored in dbm for [ENSG00000266433.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000213238.6]
WARNING, no entry stored in dbm for [ENSG00000205853.12]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000276588.1]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000277483.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259540.1]
WARNING, no entry stored in dbm for [ENSG00000260698.1]
WARNING, no entry stored in dbm for [ENSG00000183239.5]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000281128.2]
WARNING, no entry stored in dbm for [ENSG00000285786.1]
WARNING, no entry stored in dbm for [ENSG00000279266.1]
WARNING, no entry stored in dbm for [ENSG00000287738.1]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000224116.7]
WARNING, no entry stored in dbm for [ENSG00000236753.7]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000251562.8]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000233058.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000260807.7]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000248441.7]
WARNING, no entry stored in dbm for [ENSG00000262585.1]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000283103.3]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000231246.2]
WARNING, no entry stored in dbm for [ENSG00000279388.1]
WARNING, no entry stored in dbm for [ENSG00000224074.3]
WARNING, no entry stored in dbm for [ENSG00000228107.1]
WARNING, no entry stored in dbm for [ENSG00000259834.1]
WARNING, no entry stored in dbm for [ENSG00000274727.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000224205.2]
WARNING, no entry stored in dbm for [ENSG00000278975.1]
* STAR-Fusion complete. See output: /tmp/nxf.ROHHqBURqi/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)