Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/8baebbe385a028293c681b61205e1a

Files (32)

Name Size Modified
.command.begin 6 bytes May 28, 2026 2:17 PM
.command.err 50.9 KB May 28, 2026 2:57 PM
.command.log 52.3 KB May 28, 2026 2:57 PM
.command.out 453 bytes May 28, 2026 2:57 PM
.command.run 15.1 KB May 28, 2026 2:17 PM
.command.sh 1.3 KB May 28, 2026 2:17 PM
.command.trace 298 bytes May 28, 2026 2:57 PM
.command.yaml 3.8 KB May 28, 2026 2:17 PM
.exitcode 1 byte May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.cancer.introns 179.4 KB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.cancer.introns.prelim 278.1 KB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam 1.1 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.bai 1.4 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/igv_create_html.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/intron_igv_bed.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/introns.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/introns_filtered.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/prelim_introns.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/reads_alignments_extracted.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/sort_cancer_intron_reads.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.chckpts/sort_gene_reads.ok 0 bytes May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.ctat-splicing.igv.html 481.3 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam 251.1 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.bai 1.6 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.igv.tracks 1.1 KB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.introns 11.2 MB May 28, 2026 2:57 PM
EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.introns.for_IGV.bed 1.6 MB May 28, 2026 2:57 PM
versions.yml 88 bytes May 28, 2026 2:57 PM