File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/261deee66ef7b73815258247d8ff56/.command.log
Size
1.1 KB
Task
NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/261deee66ef7b73815258247d8ff56/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/261deee66ef7b73815258247d8ff56/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/blacklist_breakpoint_database_2026-04-27.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/33d800ca25e94b0303a7135ea1ee6c/ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-6ef41cd9-2e18-4687-842c-3f6f49c5643f/f2/edcdb43d4676ed2a5254ed1bf31faa/arriba_filter_config.yaml
==> STAGING COMPLETE (5 inputs)


================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 0
Arriba filter: 0 rows -> 0 PASS; wrote ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt