Done.
-parsing GTF file: /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.gtf
* Running CMD: /usr/local/bin/STAR --runThreadN 8 --genomeDir /tmp/nxf.Ebq9szPPNs/ctat_genome_lib_build_dir/ref_genome.fa.star.idx --outSAMtype BAM SortedByCoordinate --twopassMode None --alignSJDBoverhangMin 10 --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705 --alignInsertionFlush Right --alignMatesGapMax 100000 --alignIntronMax 100000 --outSAMattributes All --readFilesIn /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_1.fastp.fastq.gz /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_2.fastp.fastq.gz --genomeFastaFiles /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.fa --outSAMfilter KeepAllAddedReferences --sjdbGTFfile /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.gtf --alignSJstitchMismatchNmax 5 -1 5 5 --scoreGapNoncan -6 --readFilesCommand 'gunzip -c'
* Running CMD: mv Aligned.sortedByCoord.out.bam Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.star.sortedByCoord.out.bam
* Running CMD: samtools index Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.star.sortedByCoord.out.bam
00:47:15 : INFO : Done.
-parsing GTF file: /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.gtf
-parsing /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.star.cSorted.dupsMarked.bam
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[7970000] -done parsing /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.star.cSorted.dupsMarked.bam. Extracting junction info.
junction read elimination tally: $VAR1 = {
'num_hits: 5 != num_counted_on_fusion_contigs 2 ' => 2,
'num_hits: 5 != num_counted_on_fusion_contigs 4 ' => 12,
'num_hits: 5 != num_counted_on_fusion_contigs 3 ' => 3,
' ** passed ** ' => 49245,
'exons hit < 2' => 15,
'num_hits: 4 != num_counted_on_fusion_contigs 3 ' => 33,
'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 646,
'low complexity anchor region' => 5,
'num genes matched < 2' => 76,
'per_id < 96' => 42636,
'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 34,
'small anchor length' => 318,
'excessive soft clipping' => 46232,
'num_hits: 4 != num_counted_on_fusion_contigs 1 ' => 1,
'num_hits: 6 != num_counted_on_fusion_contigs 3 ' => 6,
'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 36,
'num_hits: 4 != num_counted_on_fusion_contigs 2 ' => 54,
'seq-similar region overlap' => 229
};
-writing fusion junction support info.
-outputting the spanning read info: /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.star.cSorted.dupsMarked.bam.fusion_spanning_info.
- counting read alignments among fusion contigs.
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[160000] -fusion SPANNING read extraction for scaff: AC002066.1--SYK
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[3000] -fusion SPANNING read extraction for scaff: AC005050.1--SLC26A3
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[10000] -fusion SPANNING read extraction for scaff: AC092807.3--DDAH1
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[58000] -fusion SPANNING read extraction for scaff: AL033504.1--SASH1
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[216000] -fusion SPANNING read extraction for scaff: BIRC6--ITGA9
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[24000] -fusion SPANNING read extraction for scaff: CENPP--ASZ1
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[23000] -fusion SPANNING read extraction for scaff: CHST11--SYK
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[17000] -fusion SPANNING read extraction for scaff: CHST11--DIRAS2
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[17000] -fusion SPANNING read extraction for scaff: CHST11--OR7E109P
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[106000] -fusion SPANNING read extraction for scaff: CLASP1--NRCAM
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[38000] -fusion SPANNING read extraction for scaff: COBL--LINC01866
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[38000] -fusion SPANNING read extraction for scaff: COBL--RN7SKP168
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[178000] -fusion SPANNING read extraction for scaff: CUX1--PCBP1-AS1
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[57000] -fusion SPANNING read extraction for scaff: DGCR2--WARS2-AS1
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[59000] -fusion SPANNING read extraction for scaff: EPHB2--TMEM39B
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[56000] -fusion SPANNING read extraction for scaff: ERCC6L2--PPP1R9A
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[47000] -fusion SPANNING read extraction for scaff: ERCC6L2--PPP1R9A-AS1
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[36000] -fusion SPANNING read extraction for scaff: EXOC4--ST13P7
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[47000] -fusion SPANNING read extraction for scaff: GLIS3--FGF7P4
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[51000] -fusion SPANNING read extraction for scaff: GLIS3--FGF7P6
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[4287000] -fusion SPANNING read extraction for scaff: IDE--MET
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[14000] -fusion SPANNING read extraction for scaff: LPAR1--SUSD1
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[77000] -fusion SPANNING read extraction for scaff: MFSD14B--LINC01591
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[135000] -fusion SPANNING read extraction for scaff: MMP24OS--PTPRT
-fusion SPANNING read extraction for scaff: NTM-AS1--OPCML
[1000]
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[127000] -fusion SPANNING read extraction for scaff: NUP98--PRMT3
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[59000]
[60000] -fusion SPANNING read extraction for scaff: PARD3--AL392046.1
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[86000] -fusion SPANNING read extraction for scaff: PARD3--CUL2
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[9000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA10
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[18000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA8
[1000]
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[4000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC4
[1000]
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[6000]
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[8000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGB6
[1000]
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[9000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA9
[1000]
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[7000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA12
[1000]
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[9000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGA11
[1000]
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[4000]
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[6000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGB7
[1000]
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[25000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC3
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[28000] -fusion SPANNING read extraction for scaff: PCDHGA4--PCDHGC5
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[21000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA8
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[12000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA10
[1000]
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[7000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC4
[1000]
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[6000]
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[11000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB6
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[12000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA9
[1000]
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[7000]
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[10000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA12
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[12000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA11
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[9000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB7
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[28000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC3
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[31000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC5
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[85000] -fusion SPANNING read extraction for scaff: POLR2J3--KIF16B
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[20000] -fusion SPANNING read extraction for scaff: PSG5--CD177
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[57000] -fusion SPANNING read extraction for scaff: PSMB2--CELF4
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[176000] -fusion SPANNING read extraction for scaff: PXN--PLA2G1B
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[94000] -fusion SPANNING read extraction for scaff: RPSAP52--HMGA2
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[14000] -fusion SPANNING read extraction for scaff: SDHAF3--AC025614.2
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[14000] -fusion SPANNING read extraction for scaff: SDHAF3--LINC01985
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[42000] -fusion SPANNING read extraction for scaff: SLC11A2--CASKP1
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[42000] -fusion SPANNING read extraction for scaff: SLC11A2--SFPQP1
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[14000] -fusion SPANNING read extraction for scaff: SLC30A7--UROC1
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[226000] -fusion SPANNING read extraction for scaff: SLC34A2--ROS1
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[73000] -fusion SPANNING read extraction for scaff: SMARCA2--TRIM72
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[54000] -fusion SPANNING read extraction for scaff: SOGA3--KIAA0408
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[134000] -fusion SPANNING read extraction for scaff: ST7--AC006001.3
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[55000] -fusion SPANNING read extraction for scaff: TLK2--AC240565.1
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[30000] -fusion SPANNING read extraction for scaff: TMED7--TICAM2
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[70000] -fusion SPANNING read extraction for scaff: TVP23C--CDRT4
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[122000] -fusion SPANNING read extraction for scaff: UHRF2--SLC1A1
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[173000] -fusion SPANNING read extraction for scaff: XYLB--GOLGA4
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[89000] -fusion SPANNING read extraction for scaff: ZBTB40--ZMYM4
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[39000] -fusion SPANNING read extraction for scaff: ZFP62--SIMC1
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[14000]
[15000]
[16000] -fusion SPANNING read extraction for scaff: ZNF559--ZNF177
-filtered reads reasons: $VAR1 = {
'lacks exon overlap' => 204036,
'seq similar region alignment' => 26934
};
EM: Starting log likelihood: -21331.140592
EM: Round [1] log likelihood: -21323.888904
EM: Round [2] log likelihood: -21322.038036
EM: Round [3] log likelihood: -21320.553736
EM: Round [4] log likelihood: -21319.352234
EM: Round [5] log likelihood: -21318.373987
EM: Round [6] log likelihood: -21317.573148
EM: Round [7] log likelihood: -21316.914091
EM: Round [8] log likelihood: -21316.368920
EM: Round [9] log likelihood: -21315.915658
EM: Round [10] log likelihood: -21315.536896
EM: Round [11] log likelihood: -21315.218772
EM: Round [12] log likelihood: -21314.950205
EM: Round [13] log likelihood: -21314.722296
EM: Round [14] log likelihood: -21314.527874
EM: Round [15] log likelihood: -21314.361137
EM: Round [16] log likelihood: -21314.217377
EM: Round [17] log likelihood: -21314.092755
EM: Round [18] log likelihood: -21313.984134
EM: Round [19] log likelihood: -21313.888940
EM: Round [20] log likelihood: -21313.805055
EM: Round [21] log likelihood: -21313.730727
EM: Round [22] log likelihood: -21313.664507
EM: Round [23] log likelihood: -21313.605189
EM: Round [24] log likelihood: -21313.551766
EM: Round [25] log likelihood: -21313.503396
EM: Round [26] log likelihood: -21313.459372
EM: Round [27] log likelihood: -21313.419099
EM: Round [28] log likelihood: -21313.382073
EM: Round [29] log likelihood: -21313.347868
EM: Round [30] log likelihood: -21313.316122
EM: Round [31] log likelihood: -21313.286527
EM: Round [32] log likelihood: -21313.258820
EM: Round [33] log likelihood: -21313.232773
EM: Round [34] log likelihood: -21313.208195
EM: Round [35] log likelihood: -21313.184917
EM: Round [36] log likelihood: -21313.162797
EM: Round [37] log likelihood: -21313.141709
EM: Round [38] log likelihood: -21313.121546
EM: Round [39] log likelihood: -21313.102215
EM: Round [40] log likelihood: -21313.083635
EM: Round [41] log likelihood: -21313.065733
EM: Round [42] log likelihood: -21313.048448
EM: Round [43] log likelihood: -21313.031726
EM: Round [44] log likelihood: -21313.015520
EM: Round [45] log likelihood: -21312.999786
EM: Round [46] log likelihood: -21312.984489
EM: Round [47] log likelihood: -21312.969596
EM: Round [48] log likelihood: -21312.955078
EM: Round [49] log likelihood: -21312.940908
EM: Round [50] log likelihood: -21312.927066
EM: Round [51] log likelihood: -21312.913529
EM: Round [52] log likelihood: -21312.900281
EM: Round [53] log likelihood: -21312.887304
EM: Round [54] log likelihood: -21312.874585
EM: Round [55] log likelihood: -21312.862109
EM: Round [56] log likelihood: -21312.849866
EM: Round [57] log likelihood: -21312.837844
EM: Round [58] log likelihood: -21312.826034
EM: Round [59] log likelihood: -21312.814427
EM: Round [60] log likelihood: -21312.803013
EM: Round [61] log likelihood: -21312.791787
EM: Round [62] log likelihood: -21312.780741
EM: Round [63] log likelihood: -21312.769869
EM: Round [64] log likelihood: -21312.759165
EM: Round [65] log likelihood: -21312.748623
EM: Round [66] log likelihood: -21312.738238
EM: Round [67] log likelihood: -21312.728006
EM: Round [68] log likelihood: -21312.717921
EM: Round [69] log likelihood: -21312.707981
EM: Round [70] log likelihood: -21312.698181
EM: Round [71] log likelihood: -21312.688516
EM: Round [72] log likelihood: -21312.678985
EM: Round [73] log likelihood: -21312.669582
EM: Round [74] log likelihood: -21312.660306
EM: Round [75] log likelihood: -21312.651153
EM: Round [76] log likelihood: -21312.642120
EM: Round [77] log likelihood: -21312.633204
EM: Round [78] log likelihood: -21312.624403
EM: Round [79] log likelihood: -21312.615714
EM: Round [80] log likelihood: -21312.607135
EM: Round [81] log likelihood: -21312.598663
EM: Round [82] log likelihood: -21312.590296
EM: Round [83] log likelihood: -21312.582032
EM: Round [84] log likelihood: -21312.573869
EM: Round [85] log likelihood: -21312.565804
EM: Round [86] log likelihood: -21312.557836
EM: Round [87] log likelihood: -21312.549963
EM: Round [88] log likelihood: -21312.542183
EM: Round [89] log likelihood: -21312.534493
EM: Round [90] log likelihood: -21312.526893
EM: Round [91] log likelihood: -21312.519381
EM: Round [92] log likelihood: -21312.511954
EM: Round [93] log likelihood: -21312.504612
EM: Round [94] log likelihood: -21312.497353
EM: Round [95] log likelihood: -21312.490174
EM: Round [96] log likelihood: -21312.483076
EM: Round [97] log likelihood: -21312.476056
EM: Round [98] log likelihood: -21312.469112
EM: Round [99] log likelihood: -21312.462244
EM: Round [100] log likelihood: -21312.455450
EM: Round [101] log likelihood: -21312.448729
EM: Round [102] log likelihood: -21312.442080
EM: Round [103] log likelihood: -21312.435500
EM: Round [104] log likelihood: -21312.428990
EM: Round [105] log likelihood: -21312.422548
EM: Round [106] log likelihood: -21312.416172
EM: Round [107] log likelihood: -21312.409862
EM: Round [108] log likelihood: -21312.403616
EM: Round [109] log likelihood: -21312.397434
EM: Round [110] log likelihood: -21312.391313
EM: Round [111] log likelihood: -21312.385255
EM: Round [112] log likelihood: -21312.379256
EM: Round [113] log likelihood: -21312.373317
EM: Round [114] log likelihood: -21312.367436
EM: Round [115] log likelihood: -21312.361612
EM: Round [116] log likelihood: -21312.355845
EM: Round [117] log likelihood: -21312.350133
EM: Round [118] log likelihood: -21312.344476
EM: Round [119] log likelihood: -21312.338872
EM: Round [120] log likelihood: -21312.333322
EM: Round [121] log likelihood: -21312.327823
EM: Round [122] log likelihood: -21312.322376
EM: Round [123] log likelihood: -21312.316979
EM: Round [124] log likelihood: -21312.311632
EM: Round [125] log likelihood: -21312.306334
EM: Round [126] log likelihood: -21312.301083
EM: Round [127] log likelihood: -21312.295881
EM: Round [128] log likelihood: -21312.290725
EM: Round [129] log likelihood: -21312.285615
EM: Round [130] log likelihood: -21312.280550
EM: Round [131] log likelihood: -21312.275530
EM: Round [132] log likelihood: -21312.270554
EM: Round [133] log likelihood: -21312.265621
EM: Round [134] log likelihood: -21312.260731
EM: Round [135] log likelihood: -21312.255882
EM: Round [136] log likelihood: -21312.251076
EM: Round [137] log likelihood: -21312.246310
EM: Round [138] log likelihood: -21312.241584
EM: Round [139] log likelihood: -21312.236898
EM: Round [140] log likelihood: -21312.232252
EM: Round [141] log likelihood: -21312.227643
EM: Round [142] log likelihood: -21312.223073
EM: Round [143] log likelihood: -21312.218540
EM: Round [144] log likelihood: -21312.214045
EM: Round [145] log likelihood: -21312.209585
EM: Round [146] log likelihood: -21312.205162
EM: Round [147] log likelihood: -21312.200774
EM: Round [148] log likelihood: -21312.196421
EM: Round [149] log likelihood: -21312.192102
EM: Round [150] log likelihood: -21312.187818
EM: Round [151] log likelihood: -21312.183567
EM: Round [152] log likelihood: -21312.179349
EM: Round [153] log likelihood: -21312.175164
EM: Round [154] log likelihood: -21312.171011
EM: Round [155] log likelihood: -21312.166890
EM: Round [156] log likelihood: -21312.162800
EM: Round [157] log likelihood: -21312.158741
EM: Round [158] log likelihood: -21312.154713
EM: Round [159] log likelihood: -21312.150715
EM: Round [160] log likelihood: -21312.146747
EM: Round [161] log likelihood: -21312.142808
EM: Round [162] log likelihood: -21312.138898
EM: Round [163] log likelihood: -21312.135017
EM: Round [164] log likelihood: -21312.131165
EM: Round [165] log likelihood: -21312.127340
EM: Round [166] log likelihood: -21312.123543
EM: Round [167] log likelihood: -21312.119773
EM: Round [168] log likelihood: -21312.116030
EM: Round [169] log likelihood: -21312.112313
EM: Round [170] log likelihood: -21312.108623
EM: Round [171] log likelihood: -21312.104959
EM: Round [172] log likelihood: -21312.101320
EM: Round [173] log likelihood: -21312.097707
EM: Round [174] log likelihood: -21312.094119
EM: Round [175] log likelihood: -21312.090556
EM: Round [176] log likelihood: -21312.087017
EM: Round [177] log likelihood: -21312.083502
EM: Round [178] log likelihood: -21312.080011
EM: Round [179] log likelihood: -21312.076543
EM: Round [180] log likelihood: -21312.073099
EM: Round [181] log likelihood: -21312.069678
EM: Round [182] log likelihood: -21312.066280
EM: Round [183] log likelihood: -21312.062904
EM: Round [184] log likelihood: -21312.059551
EM: Round [185] log likelihood: -21312.056219
EM: Round [186] log likelihood: -21312.052909
EM: Round [187] log likelihood: -21312.049621
EM: Round [188] log likelihood: -21312.046354
EM: Round [189] log likelihood: -21312.043108
EM: Round [190] log likelihood: -21312.039883
EM: Round [191] log likelihood: -21312.036678
EM: Round [192] log likelihood: -21312.033494
EM: Round [193] log likelihood: -21312.030330
EM: Round [194] log likelihood: -21312.027186
EM: Round [195] log likelihood: -21312.024061
EM: Round [196] log likelihood: -21312.020956
EM: Round [197] log likelihood: -21312.017871
EM: Round [198] log likelihood: -21312.014804
EM: Round [199] log likelihood: -21312.011756
EM: Round [200] log likelihood: -21312.008727
EM: Round [201] log likelihood: -21312.005716
EM: Round [202] log likelihood: -21312.002724
EM: Round [203] log likelihood: -21311.999750
EM: Round [204] log likelihood: -21311.996793
EM: Round [205] log likelihood: -21311.993855
EM: Round [206] log likelihood: -21311.990933
EM: Round [207] log likelihood: -21311.988030
EM: Round [208] log likelihood: -21311.985143
EM: Round [209] log likelihood: -21311.982274
EM: Round [210] log likelihood: -21311.979421
EM: Round [211] log likelihood: -21311.976585
EM: Round [212] log likelihood: -21311.973765
EM: Round [213] log likelihood: -21311.970962
EM: Round [214] log likelihood: -21311.968175
EM: Round [215] log likelihood: -21311.965404
EM: Round [216] log likelihood: -21311.962649
EM: Round [217] log likelihood: -21311.959909
EM: Round [218] log likelihood: -21311.957186
EM: Round [219] log likelihood: -21311.954477
EM: Round [220] log likelihood: -21311.951784
EM: Round [221] log likelihood: -21311.949106
EM: Round [222] log likelihood: -21311.946443
EM: Round [223] log likelihood: -21311.943795
EM: Round [224] log likelihood: -21311.941161
EM: Round [225] log likelihood: -21311.938542
EM: Round [226] log likelihood: -21311.935938
EM: Round [227] log likelihood: -21311.933347
EM: Round [228] log likelihood: -21311.930771
EM: Round [229] log likelihood: -21311.928209
EM: Round [230] log likelihood: -21311.925661
EM: Round [231] log likelihood: -21311.923127
EM: Round [232] log likelihood: -21311.920606
EM: Round [233] log likelihood: -21311.918099
EM: Round [234] log likelihood: -21311.915605
EM: Round [235] log likelihood: -21311.913125
EM: Round [236] log likelihood: -21311.910658
EM: Round [237] log likelihood: -21311.908203
EM: Round [238] log likelihood: -21311.905762
EM: Round [239] log likelihood: -21311.903334
EM: Round [240] log likelihood: -21311.900918
EM: Round [241] log likelihood: -21311.898515
EM: Round [242] log likelihood: -21311.896124
EM: Round [243] log likelihood: -21311.893746
EM: Round [244] log likelihood: -21311.891380
EM: Round [245] log likelihood: -21311.889026
EM: Round [246] log likelihood: -21311.886684
EM: Round [247] log likelihood: -21311.884355
EM: Round [248] log likelihood: -21311.882037
EM: Round [249] log likelihood: -21311.879731
EM: Round [250] log likelihood: -21311.877437
EM: Round [251] log likelihood: -21311.875154
EM: Round [252] log likelihood: -21311.872882
EM: Round [253] log likelihood: -21311.870623
EM: Round [254] log likelihood: -21311.868374
EM: Round [255] log likelihood: -21311.866137
EM: Round [256] log likelihood: -21311.863910
EM: Round [257] log likelihood: -21311.861695
EM: Round [258] log likelihood: -21311.859491
EM: Round [259] log likelihood: -21311.857297
EM: Round [260] log likelihood: -21311.855115
EM: Round [261] log likelihood: -21311.852943
EM: Round [262] log likelihood: -21311.850781
EM: Round [263] log likelihood: -21311.848630
EM: Round [264] log likelihood: -21311.846490
EM: Round [265] log likelihood: -21311.844360
EM: Round [266] log likelihood: -21311.842240
EM: Round [267] log likelihood: -21311.840131
EM: Round [268] log likelihood: -21311.838031
EM: Round [269] log likelihood: -21311.835942
EM: Round [270] log likelihood: -21311.833862
EM: Round [271] log likelihood: -21311.831792
EM: Round [272] log likelihood: -21311.829733
EM: Round [273] log likelihood: -21311.827683
EM: Round [274] log likelihood: -21311.825642
EM: Round [275] log likelihood: -21311.823611
EM: Round [276] log likelihood: -21311.821590
EM: Round [277] log likelihood: -21311.819578
EM: Round [278] log likelihood: -21311.817576
EM: Round [279] log likelihood: -21311.815583
EM: Round [280] log likelihood: -21311.813599
EM: Round [281] log likelihood: -21311.811624
EM: Round [282] log likelihood: -21311.809658
EM: Round [283] log likelihood: -21311.807702
EM: Round [284] log likelihood: -21311.805754
EM: Round [285] log likelihood: -21311.803815
EM: Round [286] log likelihood: -21311.801885
EM: Round [287] log likelihood: -21311.799964
EM: Round [288] log likelihood: -21311.798052
EM: Round [289] log likelihood: -21311.796148
EM: Round [290] log likelihood: -21311.794253
EM: Round [291] log likelihood: -21311.792367
EM: Round [292] log likelihood: -21311.790489
EM: Round [293] log likelihood: -21311.788619
EM: Round [294] log likelihood: -21311.786758
EM: Round [295] log likelihood: -21311.784905
EM: Round [296] log likelihood: -21311.783060
EM: Round [297] log likelihood: -21311.781224
EM: Round [298] log likelihood: -21311.779395
EM: Round [299] log likelihood: -21311.777575
EM: Round [300] log likelihood: -21311.775763
EM: Round [301] log likelihood: -21311.773959
EM: Round [302] log likelihood: -21311.772162
EM: Round [303] log likelihood: -21311.770374
EM: Round [304] log likelihood: -21311.768593
EM: Round [305] log likelihood: -21311.766820
EM: Round [306] log likelihood: -21311.765055
EM: Round [307] log likelihood: -21311.763297
EM: Round [308] log likelihood: -21311.761547
EM: Round [309] log likelihood: -21311.759805
EM: Round [310] log likelihood: -21311.758070
EM: Round [311] log likelihood: -21311.756343
EM: Round [312] log likelihood: -21311.754623
EM: Round [313] log likelihood: -21311.752910
EM: Round [314] log likelihood: -21311.751205
EM: Round [315] log likelihood: -21311.749507
EM: Round [316] log likelihood: -21311.747816
EM: Round [317] log likelihood: -21311.746133
EM: Round [318] log likelihood: -21311.744456
EM: Round [319] log likelihood: -21311.742787
EM: Round [320] log likelihood: -21311.741124
EM: Round [321] log likelihood: -21311.739469
EM: Round [322] log likelihood: -21311.737821
EM: Round [323] log likelihood: -21311.736179
EM: Round [324] log likelihood: -21311.734545
EM: Round [325] log likelihood: -21311.732917
EM: Round [326] log likelihood: -21311.731296
EM: Round [327] log likelihood: -21311.729682
EM: Round [328] log likelihood: -21311.728074
EM: Round [329] log likelihood: -21311.726473
EM: Round [330] log likelihood: -21311.724879
EM: Round [331] log likelihood: -21311.723291
EM: Round [332] log likelihood: -21311.721710
EM: Round [333] log likelihood: -21311.720135
EM: Round [334] log likelihood: -21311.718567
EM: Round [335] log likelihood: -21311.717006
EM: Round [336] log likelihood: -21311.715450
EM: Round [337] log likelihood: -21311.713901
EM: Round [338] log likelihood: -21311.712358
EM: Round [339] log likelihood: -21311.710822
EM: Round [340] log likelihood: -21311.709292
EM: Round [341] log likelihood: -21311.707768
EM: Round [342] log likelihood: -21311.706250
EM: Round [343] log likelihood: -21311.704738
EM: Round [344] log likelihood: -21311.703233
EM: Round [345] log likelihood: -21311.701733
EM: Round [346] log likelihood: -21311.700239
EM: Round [347] log likelihood: -21311.698752
EM: Round [348] log likelihood: -21311.697270
EM: Round [349] log likelihood: -21311.695794
EM: Round [350] log likelihood: -21311.694325
EM: Round [351] log likelihood: -21311.692861
EM: Round [352] log likelihood: -21311.691403
EM: Round [353] log likelihood: -21311.689950
EM: Round [354] log likelihood: -21311.688503
EM: Round [355] log likelihood: -21311.687063
EM: Round [356] log likelihood: -21311.685627
EM: Round [357] log likelihood: -21311.684198
EM: Round [358] log likelihood: -21311.682774
EM: Round [359] log likelihood: -21311.681355
EM: Round [360] log likelihood: -21311.679943
EM: Round [361] log likelihood: -21311.678535
EM: Round [362] log likelihood: -21311.677133
EM: Round [363] log likelihood: -21311.675737
EM: Round [364] log likelihood: -21311.674346
EM: Round [365] log likelihood: -21311.672961
EM: Round [366] log likelihood: -21311.671581
EM: Round [367] log likelihood: -21311.670206
EM: Round [368] log likelihood: -21311.668836
EM: Round [369] log likelihood: -21311.667472
EM: Round [370] log likelihood: -21311.666113
EM: Round [371] log likelihood: -21311.664760
EM: Round [372] log likelihood: -21311.663411
EM: Round [373] log likelihood: -21311.662068
EM: Round [374] log likelihood: -21311.660730
EM: Round [375] log likelihood: -21311.659397
EM: Round [376] log likelihood: -21311.658069
EM: Round [377] log likelihood: -21311.656746
EM: Round [378] log likelihood: -21311.655428
EM: Round [379] log likelihood: -21311.654115
EM: Round [380] log likelihood: -21311.652807
EM: Round [381] log likelihood: -21311.651505
EM: Round [382] log likelihood: -21311.650207
EM: Round [383] log likelihood: -21311.648914
EM: Round [384] log likelihood: -21311.647625
EM: Round [385] log likelihood: -21311.646342
EM: Round [386] log likelihood: -21311.645064
EM: Round [387] log likelihood: -21311.643790
EM: Round [388] log likelihood: -21311.642521
EM: Round [389] log likelihood: -21311.641257
EM: Round [390] log likelihood: -21311.639998
EM: Round [391] log likelihood: -21311.638743
EM: Round [392] log likelihood: -21311.637493
EM: Round [393] log likelihood: -21311.636248
EM: Round [394] log likelihood: -21311.635007
EM: Round [395] log likelihood: -21311.633771
EM: Round [396] log likelihood: -21311.632539
EM: Round [397] log likelihood: -21311.631312
EM: Round [398] log likelihood: -21311.630090
EM: Round [399] log likelihood: -21311.628872
EM: Round [400] log likelihood: -21311.627659
EM: Round [401] log likelihood: -21311.626450
EM: Round [402] log likelihood: -21311.625245
EM: Round [403] log likelihood: -21311.624045
EM: Round [404] log likelihood: -21311.622850
EM: Round [405] log likelihood: -21311.621658
EM: Round [406] log likelihood: -21311.620471
EM: Round [407] log likelihood: -21311.619289
EM: Round [408] log likelihood: -21311.618111
EM: Round [409] log likelihood: -21311.616937
EM: Round [410] log likelihood: -21311.615767
EM: Round [411] log likelihood: -21311.614602
EM: Round [412] log likelihood: -21311.613441
EM: Round [413] log likelihood: -21311.612284
EM: Round [414] log likelihood: -21311.611131
EM: Round [415] log likelihood: -21311.609982
EM: Round [416] log likelihood: -21311.608838
EM: Round [417] log likelihood: -21311.607698
EM: Round [418] log likelihood: -21311.606561
EM: Round [419] log likelihood: -21311.605429
EM: Round [420] log likelihood: -21311.604301
EM: Round [421] log likelihood: -21311.603177
EM: Round [422] log likelihood: -21311.602057
EM: Round [423] log likelihood: -21311.600942
EM: Round [424] log likelihood: -21311.599830
EM: Round [425] log likelihood: -21311.598722
EM: Round [426] log likelihood: -21311.597618
EM: Round [427] log likelihood: -21311.596518
EM: Round [428] log likelihood: -21311.595422
EM: Round [429] log likelihood: -21311.594329
EM: Round [430] log likelihood: -21311.593241
EM: Round [431] log likelihood: -21311.592157
EM: Round [432] log likelihood: -21311.591076
EM: Round [433] log likelihood: -21311.589999
EM: Round [434] log likelihood: -21311.588926
EM: Round [435] log likelihood: -21311.587857
EM: Round [436] log likelihood: -21311.586792
EM: Round [437] log likelihood: -21311.585730
EM: Round [438] log likelihood: -21311.584672
EM: Round [439] log likelihood: -21311.583618
EM: Round [440] log likelihood: -21311.582567
EM: Round [441] log likelihood: -21311.581520
EM: Round [442] log likelihood: -21311.580477
EM: Round [443] log likelihood: -21311.579438
EM: Round [444] log likelihood: -21311.578402
EM: Round [445] log likelihood: -21311.577370
EM: Round [446] log likelihood: -21311.576341
EM: Round [447] log likelihood: -21311.575316
EM: Round [448] log likelihood: -21311.574295
EM: Round [449] log likelihood: -21311.573277
EM: Round [450] log likelihood: -21311.572262
EM: Round [451] log likelihood: -21311.571252
EM: Round [452] log likelihood: -21311.570244
EM: Round [453] log likelihood: -21311.569240
EM: Round [454] log likelihood: -21311.568240
EM: Round [455] log likelihood: -21311.567243
EM: Round [456] log likelihood: -21311.566250
EM: Round [457] log likelihood: -21311.565260
EM: Round [458] log likelihood: -21311.564273
EM: Round [459] log likelihood: -21311.563290
EM: Round [460] log likelihood: -21311.562310
EM: Round [461] log likelihood: -21311.561333
EM: Round [462] log likelihood: -21311.560360
EM: Round [463] log likelihood: -21311.559390
EM: Round [464] log likelihood: -21311.558424
EM: Round [465] log likelihood: -21311.557461
EM: Round [466] log likelihood: -21311.556501
EM: Round [467] log likelihood: -21311.555544
EM: Round [468] log likelihood: -21311.554591
EM: Round [469] log likelihood: -21311.553641
EM: Round [470] log likelihood: -21311.552694
EM: Round [471] log likelihood: -21311.551750
EM: Round [472] log likelihood: -21311.550810
EM: Round [473] log likelihood: -21311.549873
EM: Round [474] log likelihood: -21311.548939
EM: Round [475] log likelihood: -21311.548008
EM: Round [476] log likelihood: -21311.547080
EM: Round [477] log likelihood: -21311.546156
EM: Round [478] log likelihood: -21311.545234
EM: Round [479] log likelihood: -21311.544316
EM: Round [480] log likelihood: -21311.543400
EM: Round [481] log likelihood: -21311.542488
EM: Round [482] log likelihood: -21311.541579
EM: Round [483] log likelihood: -21311.540673
EM: Round [484] log likelihood: -21311.539770
EM: Round [485] log likelihood: -21311.538870
EM: Round [486] log likelihood: -21311.537973
EM: Round [487] log likelihood: -21311.537079
EM: Round [488] log likelihood: -21311.536188
EM: Round [489] log likelihood: -21311.535300
EM: Round [490] log likelihood: -21311.534415
EM: Round [491] log likelihood: -21311.533533
EM: Round [492] log likelihood: -21311.532654
EM: Round [493] log likelihood: -21311.531778
EM: Round [494] log likelihood: -21311.530905
EM: Round [495] log likelihood: -21311.530034
EM: Round [496] log likelihood: -21311.529167
EM: Round [497] log likelihood: -21311.528302
EM: Round [498] log likelihood: -21311.527441
EM: Round [499] log likelihood: -21311.526582
EM: Round [500] log likelihood: -21311.525726
EM: Round [501] log likelihood: -21311.524872
EM: Round [502] log likelihood: -21311.524022
EM: Round [503] log likelihood: -21311.523174
EM: Round [504] log likelihood: -21311.522330
EM: Round [505] log likelihood: -21311.521488
EM: Round [506] log likelihood: -21311.520649
EM: Round [507] log likelihood: -21311.519812
EM: Round [508] log likelihood: -21311.518978
EM: Round [509] log likelihood: -21311.518147
EM: Round [510] log likelihood: -21311.517319
EM: Round [511] log likelihood: -21311.516494
EM: Round [512] log likelihood: -21311.515671
EM: Round [513] log likelihood: -21311.514851
EM: Round [514] log likelihood: -21311.514033
EM: Round [515] log likelihood: -21311.513219
EM: Round [516] log likelihood: -21311.512406
EM: Round [517] log likelihood: -21311.511597
EM: Round [518] log likelihood: -21311.510790
EM: Round [519] log likelihood: -21311.509986
EM: Round [520] log likelihood: -21311.509184
EM: Round [521] log likelihood: -21311.508385
EM: Round [522] log likelihood: -21311.507589
EM: Round [523] log likelihood: -21311.506795
EM: Round [524] log likelihood: -21311.506004
EM: Round [525] log likelihood: -21311.505215
EM: Round [526] log likelihood: -21311.504429
EM: Round [527] log likelihood: -21311.503646
EM: Round [528] log likelihood: -21311.502865
EM: Round [529] log likelihood: -21311.502086
EM: Round [530] log likelihood: -21311.501310
EM: Round [531] log likelihood: -21311.500537
EM: Round [532] log likelihood: -21311.499766
EM: Round [533] log likelihood: -21311.498997
EM: Round [534] log likelihood: -21311.498231
EM: Round [535] log likelihood: -21311.497468
EM: Round [536] log likelihood: -21311.496707
EM: Round [537] log likelihood: -21311.495948
EM: Round [538] log likelihood: -21311.495192
EM: Round [539] log likelihood: -21311.494438
EM: Round [540] log likelihood: -21311.493687
EM: Round [541] log likelihood: -21311.492938
EM: Round [542] log likelihood: -21311.492191
EM: Round [543] log likelihood: -21311.491447
EM: Round [544] log likelihood: -21311.490705
EM: Round [545] log likelihood: -21311.489966
EM: Round [546] log likelihood: -21311.489229
EM: Round [547] log likelihood: -21311.488494
EM: Round [548] log likelihood: -21311.487762
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EM: Round [550] log likelihood: -21311.486304
EM: Round [551] log likelihood: -21311.485578
EM: Round [552] log likelihood: -21311.484855
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EM: Round [554] log likelihood: -21311.483416
EM: Round [555] log likelihood: -21311.482700
EM: Round [556] log likelihood: -21311.481986
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EM: Round [558] log likelihood: -21311.480564
EM: Round [559] log likelihood: -21311.479857
EM: Round [560] log likelihood: -21311.479152
EM: Round [561] log likelihood: -21311.478449
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EM: Round [564] log likelihood: -21311.476354
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EM: Round [566] log likelihood: -21311.474968
EM: Round [567] log likelihood: -21311.474279
EM: Round [568] log likelihood: -21311.473591
EM: Round [569] log likelihood: -21311.472906
EM: Round [570] log likelihood: -21311.472223
EM: Round [571] log likelihood: -21311.471542
EM: Round [572] log likelihood: -21311.470863
EM: Round [573] log likelihood: -21311.470186
EM: Round [574] log likelihood: -21311.469511
EM: Round [575] log likelihood: -21311.468839
EM: Round [576] log likelihood: -21311.468168
EM: Round [577] log likelihood: -21311.467500
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EM: Round [579] log likelihood: -21311.466170
EM: Round [580] log likelihood: -21311.465508
EM: Round [581] log likelihood: -21311.464847
EM: Round [582] log likelihood: -21311.464189
EM: Round [583] log likelihood: -21311.463533
EM: Round [584] log likelihood: -21311.462880
EM: Round [585] log likelihood: -21311.462228
EM: Round [586] log likelihood: -21311.461578
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EM: Round [590] log likelihood: -21311.458998
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EM: Round [595] log likelihood: -21311.455819
EM: Round [596] log likelihood: -21311.455189
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EM: Round [600] log likelihood: -21311.452688
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EM: Round [603] log likelihood: -21311.450832
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EM: Round [617] log likelihood: -21311.442394
EM: Round [618] log likelihood: -21311.441805
EM: Round [619] log likelihood: -21311.441218
EM: Round [620] log likelihood: -21311.440633
EM: Round [621] log likelihood: -21311.440049
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EM: Round [624] log likelihood: -21311.438309
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EM: Round [629] log likelihood: -21311.435443
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EM: Round [631] log likelihood: -21311.434309
EM: Round [632] log likelihood: -21311.433744
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EM: Round [698] log likelihood: -21311.399975
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EM: Round [707] log likelihood: -21311.395858
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EM: Round [709] log likelihood: -21311.394958
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EM: Round [712] log likelihood: -21311.393617
EM: Round [713] log likelihood: -21311.393173
EM: Round [714] log likelihood: -21311.392730
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EM: Round [719] log likelihood: -21311.390534
EM: Round [720] log likelihood: -21311.390099
EM: Round [721] log likelihood: -21311.389664
EM: Round [722] log likelihood: -21311.389231
EM: Round [723] log likelihood: -21311.388800
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EM: Round [731] log likelihood: -21311.385391
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EM: Round [735] log likelihood: -21311.383716
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EM: Round [737] log likelihood: -21311.382885
EM: Round [738] log likelihood: -21311.382472
EM: Round [739] log likelihood: -21311.382060
EM: Round [740] log likelihood: -21311.381649
EM: Round [741] log likelihood: -21311.381239
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EM: Round [795] log likelihood: -21311.360749
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EM: Round [811] log likelihood: -21311.355254
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EM: Round [815] log likelihood: -21311.353918
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EM: Round [915] log likelihood: -21311.324891
EM: Round [916] log likelihood: -21311.324639
EM: Round [917] log likelihood: -21311.324388
EM: Round [918] log likelihood: -21311.324137
EM: Round [919] log likelihood: -21311.323887
EM: Round [920] log likelihood: -21311.323638
EM: Round [921] log likelihood: -21311.323389
EM: Round [922] log likelihood: -21311.323141
EM: Round [923] log likelihood: -21311.322894
EM: Round [924] log likelihood: -21311.322647
EM: Round [925] log likelihood: -21311.322401
EM: Round [926] log likelihood: -21311.322156
EM: Round [927] log likelihood: -21311.321911
EM: Round [928] log likelihood: -21311.321667
EM: Round [929] log likelihood: -21311.321424
EM: Round [930] log likelihood: -21311.321181
EM: Round [931] log likelihood: -21311.320939
EM: Round [932] log likelihood: -21311.320697
EM: Round [933] log likelihood: -21311.320457
EM: Round [934] log likelihood: -21311.320216
EM: Round [935] log likelihood: -21311.319977
EM: Round [936] log likelihood: -21311.319738
EM: Round [937] log likelihood: -21311.319500
EM: Round [938] log likelihood: -21311.319262
EM: Round [939] log likelihood: -21311.319025
EM: Round [940] log likelihood: -21311.318789
EM: Round [941] log likelihood: -21311.318554
EM: Round [942] log likelihood: -21311.318319
EM: Round [943] log likelihood: -21311.318084
EM: Round [944] log likelihood: -21311.317850
EM: Round [945] log likelihood: -21311.317617
EM: Round [946] log likelihood: -21311.317385
EM: Round [947] log likelihood: -21311.317153
EM: Round [948] log likelihood: -21311.316922
EM: Round [949] log likelihood: -21311.316691
EM: Round [950] log likelihood: -21311.316461
EM: Round [951] log likelihood: -21311.316232
EM: Round [952] log likelihood: -21311.316003
EM: Round [953] log likelihood: -21311.315775
EM: Round [954] log likelihood: -21311.315547
EM: Round [955] log likelihood: -21311.315320
EM: Round [956] log likelihood: -21311.315094
EM: Round [957] log likelihood: -21311.314868
EM: Round [958] log likelihood: -21311.314643
EM: Round [959] log likelihood: -21311.314418
EM: Round [960] log likelihood: -21311.314195
EM: Round [961] log likelihood: -21311.313971
EM: Round [962] log likelihood: -21311.313748
EM: Round [963] log likelihood: -21311.313526
EM: Round [964] log likelihood: -21311.313305
EM: Round [965] log likelihood: -21311.313084
EM: Round [966] log likelihood: -21311.312864
EM: Round [967] log likelihood: -21311.312644
EM: Round [968] log likelihood: -21311.312425
EM: Round [969] log likelihood: -21311.312206
EM: Round [970] log likelihood: -21311.311988
EM: Round [971] log likelihood: -21311.311771
EM: Round [972] log likelihood: -21311.311554
EM: Round [973] log likelihood: -21311.311337
EM: Round [974] log likelihood: -21311.311122
EM: Round [975] log likelihood: -21311.310907
EM: Round [976] log likelihood: -21311.310692
EM: Round [977] log likelihood: -21311.310478
EM: Round [978] log likelihood: -21311.310265
EM: Round [979] log likelihood: -21311.310052
EM: Round [980] log likelihood: -21311.309840
EM: Round [981] log likelihood: -21311.309628
EM: Round [982] log likelihood: -21311.309417
EM: Round [983] log likelihood: -21311.309206
EM: Round [984] log likelihood: -21311.308996
EM: Round [985] log likelihood: -21311.308787
EM: Round [986] log likelihood: -21311.308578
EM: Round [987] log likelihood: -21311.308369
EM: Round [988] log likelihood: -21311.308162
EM: Round [989] log likelihood: -21311.307954
EM: Round [990] log likelihood: -21311.307748
EM: Round [991] log likelihood: -21311.307541
EM: Round [992] log likelihood: -21311.307336
EM: Round [993] log likelihood: -21311.307131
EM: Round [994] log likelihood: -21311.306926
EM: Round [995] log likelihood: -21311.306722
EM: Round [996] log likelihood: -21311.306519
EM: Round [997] log likelihood: -21311.306316
EM: Round [998] log likelihood: -21311.306114
EM: Round [999] log likelihood: -21311.305912
EM: Round [1000] log likelihood: -21311.305711
EM: Round [1001] log likelihood: -21311.305510
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
-extracting read coordinates from /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam into /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.read_coords
CMD: touch /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.read_coords > /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.frag_coords > /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.consolidated.bam.frag_coords.coord_sorted
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter --genome_lib_dir ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 50
CMD: cp /tmp/nxf.Ebq9szPPNs/fi_workdir/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.post_blast_and_promiscuity_filter
-done, see /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.post_blast_and_promiscuity_filter.annot_filter.pass
EM: Starting log likelihood: -20349.607090
EM: Round [1] log likelihood: -20348.404228
EM: Round [2] log likelihood: -20348.403620
EM: Round [3] log likelihood: -20348.403619
EM: Stopping iterations at round 3 due to insufficient improvement in likelihood.
-total frags in /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_1.fastp.fastq.gz: 294833085
Warning - not locating file: /tmp/nxf.Ebq9szPPNs/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2.gmap_trinity_GG.fusions.gff3.bed
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000231365.6]
WARNING, no entry stored in dbm for [ENSG00000230534.6]
WARNING, no entry stored in dbm for [ENSG00000216829.6]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000267052.3]
WARNING, no entry stored in dbm for [ENSG00000267052.3]
WARNING, no entry stored in dbm for [ENSG00000267052.3]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000243797.6]
WARNING, no entry stored in dbm for [ENSG00000243797.6]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000237813.4]
WARNING, no entry stored in dbm for [ENSG00000237813.4]
WARNING, no entry stored in dbm for [ENSG00000237813.4]
WARNING, no entry stored in dbm for [ENSG00000237813.4]
WARNING, no entry stored in dbm for [ENSG00000241749.4]
WARNING, no entry stored in dbm for [ENSG00000254083.6]
WARNING, no entry stored in dbm for [ENSG00000254083.6]
WARNING, no entry stored in dbm for [ENSG00000254083.6]
ls: cannot access 'IGV_inputs': No such file or directory