.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/dd7c50cb1468e219d41efe190887e8/.command.out
Size: 876 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1)
Attempt

Content

  AIH curated blacklist: matched 1 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 1
  Pass (FILTER=PASS): 0 (0.0%)
  Fail (FILTER=FAIL): 1 (100.0%)

AIH curated blacklist (blacklisted flag):
  Total blacklisted: 1
  All 1 blacklisted rows have FILTER=FAIL

Failure reasons (top 15):
  confidence_below_min(medium<high);aih_curated_blacklist: 1

Breakdown by confidence:
  medium: 0 pass, 1 fail (total: 1)
Arriba filter: 1 rows -> 0 PASS; wrote ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt