Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (SW780_FFPE_RNA_0001_B23LG7FLT4_2)
Attempt
2
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7f/39c68ca9a97554ba5d5df3cdbdf887

Files (32)

Name Size Modified
.command.begin 6 bytes May 28, 2026 2:46 PM
.command.err 39.8 KB May 28, 2026 4:16 PM
.command.log 41.2 KB May 28, 2026 4:16 PM
.command.out 453 bytes May 28, 2026 4:16 PM
.command.run 15.0 KB May 28, 2026 2:45 PM
.command.sh 1.2 KB May 28, 2026 2:45 PM
.command.trace 313 bytes May 28, 2026 4:16 PM
.command.yaml 3.8 KB May 28, 2026 2:45 PM
.exitcode 1 byte May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.cancer.introns 622.9 KB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.cancer.introns.prelim 1.3 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.cancer_intron_reads.sorted.bam 5.9 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.cancer_intron_reads.sorted.bam.bai 1.4 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/SW780_FFPE_RNA_0001_B23LG7FLT4_2.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/SW780_FFPE_RNA_0001_B23LG7FLT4_2.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/SW780_FFPE_RNA_0001_B23LG7FLT4_2.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/SW780_FFPE_RNA_0001_B23LG7FLT4_2.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/igv_create_html.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/intron_igv_bed.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/introns.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/introns_filtered.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/prelim_introns.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/reads_alignments_extracted.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/sort_cancer_intron_reads.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.chckpts/sort_gene_reads.ok 0 bytes May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.ctat-splicing.igv.html 1.3 GB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.gene_reads.sorted.sifted.bam 715.1 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.gene_reads.sorted.sifted.bam.bai 1.8 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.igv.tracks 1.1 KB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.introns 15.9 MB May 28, 2026 4:16 PM
SW780_FFPE_RNA_0001_B23LG7FLT4_2.introns.for_IGV.bed 5.8 MB May 28, 2026 4:16 PM
versions.yml 88 bytes May 28, 2026 4:16 PM