Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/22280299c827174e83b167bd90a97e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/22280299c827174e83b167bd90a97e/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/f8ba81fa70a9b2e7b6c339f330dd19/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/f8ba81fa70a9b2e7b6c339f330dd19/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory