Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/2dfb465bb695e02f8b0642d25c29ee/LungN_FFPE_L01_RNA_01_B23LG7FLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/9f12e381b327f16359261f18c427c1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/9f12e381b327f16359261f18c427c1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/2dfb465bb695e02f8b0642d25c29ee/LungN_FFPE_L01_RNA_01_B23LG7FLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory