Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3)
Attempt
2
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/26413b1ff5f813745e0afe0a3efe8d

Files (32)

Name Size Modified
.command.begin 6 bytes May 28, 2026 2:53 PM
.command.err 39.7 KB May 28, 2026 4:26 PM
.command.log 41.2 KB May 28, 2026 4:26 PM
.command.out 453 bytes May 28, 2026 4:26 PM
.command.run 15.1 KB May 28, 2026 2:53 PM
.command.sh 1.3 KB May 28, 2026 2:53 PM
.command.trace 314 bytes May 28, 2026 4:26 PM
.command.yaml 3.9 KB May 28, 2026 2:53 PM
.exitcode 1 byte May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer.introns 585.3 KB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer.introns.prelim 1.2 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer_intron_reads.sorted.bam 6.1 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer_intron_reads.sorted.bam.bai 1.5 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/igv_create_html.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/intron_igv_bed.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/introns.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/introns_filtered.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/prelim_introns.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/reads_alignments_extracted.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/sort_cancer_intron_reads.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.chckpts/sort_gene_reads.ok 0 bytes May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.ctat-splicing.igv.html 1.0 GB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.gene_reads.sorted.sifted.bam 564.5 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.gene_reads.sorted.sifted.bam.bai 1.8 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.igv.tracks 1.1 KB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.introns 15.0 MB May 28, 2026 4:26 PM
SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3.introns.for_IGV.bed 5.6 MB May 28, 2026 4:26 PM
versions.yml 88 bytes May 28, 2026 4:26 PM