Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/b5338964d144181f5b49e4f10fd9ae/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/b5338964d144181f5b49e4f10fd9ae/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/065809e239449492003c5b957701ce/HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/065809e239449492003c5b957701ce/HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory