Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/41bc9ec00b66cdb4417621e15f2406

Files (32)

Name Size Modified
.command.begin 6 bytes May 28, 2026 1:32 PM
.command.err 20.7 KB May 28, 2026 1:36 PM
.command.log 22.1 KB May 28, 2026 1:36 PM
.command.out 411 bytes May 28, 2026 1:36 PM
.command.run 15.1 KB May 28, 2026 1:32 PM
.command.sh 1.3 KB May 28, 2026 1:32 PM
.command.trace 299 bytes May 28, 2026 1:36 PM
.command.yaml 3.8 KB May 28, 2026 1:32 PM
.exitcode 1 byte May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.cancer.introns 20.8 KB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.cancer.introns.prelim 30.3 KB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam 138.0 KB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.bai 1.2 MB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/igv_create_html.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/intron_igv_bed.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/introns.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/introns_filtered.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/prelim_introns.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/reads_alignments_extracted.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/sort_cancer_intron_reads.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.chckpts/sort_gene_reads.ok 0 bytes May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.ctat-splicing.igv.html 18.5 MB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam 8.8 MB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.bai 1.2 MB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.igv.tracks 1.1 KB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.introns 6.7 MB May 28, 2026 1:36 PM
HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1.introns.for_IGV.bed 181.9 KB May 28, 2026 1:36 PM
versions.yml 88 bytes May 28, 2026 1:36 PM