.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (LungN_FFPE_L02_RNA_01_B23LG7FLT4_1)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/b444c9de754922582068228e0aeb5c/.command.out
Size: 815 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (LungN_FFPE_L02_RNA_01_B23LG7FLT4_1)
Attempt

Content

  AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 2
  Pass (FILTER=PASS): 0 (0.0%)
  Fail (FILTER=FAIL): 2 (100.0%)

Failure reasons (top 15):
  confidence_below_min(medium<high): 1
  confidence_below_min(low<high): 1

Breakdown by confidence:
  low: 0 pass, 1 fail (total: 1)
  medium: 0 pass, 1 fail (total: 1)
Arriba filter: 2 rows -> 0 PASS; wrote LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt