Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/27f29bbf8ecffc582b203265d53d2f/786-O_FFPE_RNA_0001_B23LG7FLT4_3.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/d5f9a48711d7ff38958faa6a8a294d/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/d5f9a48711d7ff38958faa6a8a294d/.command.sh
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory