Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/ac809aa56e21dad3b1f5fc43ec9d75/BreastNB_FFPE_L02_RNA_01_B23LG7FLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/12ce14ac3d6302227859cabae30546/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/12ce14ac3d6302227859cabae30546/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/ac809aa56e21dad3b1f5fc43ec9d75/BreastNB_FFPE_L02_RNA_01_B23LG7FLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory