NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_3) - dev_rna_exp0008_exp0011-e7be3c7a_b - Workflow Tracker

Runs
dev_rna_exp0..-e7be3c7a_b
Tasks
GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_3)

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Task Info

Status: succeeded
Hash: ab11dd9cc96e
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 786-O_FFPE_RNA_0001_B23LG7FLT4_3
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5f/c27cc1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/c27cc1fa6ba3ddd77063f6cee8527d
Native ID: nf-5fc27cc1fa6ba3ddd77063f6cee8527d-322bd

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 101.2 GB / 148.0 GB
Process I/O (rchar / wchar): 58.2 GB / 37.4 GB
Disk I/O (read / write): - / 37.4 GB
Host: i-0d4e911e384368f35 ( on-demand)

Runtime

Submitted: May 28, 2026 3:42:47 PM
Completed: May 28, 2026 4:34:27 PM
Total Duration: 51m 39s

Phases

Queue: 2s
Execution: 49m 3s
Stage/Unstage: 2m 34s

Attempt 1

Execution

Status: failed
Hash: 0c/cbc24e
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/cbc24ed5dac3b3c9186d6123e7bd4f
Native ID: nf-0ccbc24ed5dac3b3c9186d6123e7bd4f-2b84f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0441687fedf7fb462 ( spot)

Runtime

Submitted: May 28, 2026 3:23:43 PM
Completed: May 28, 2026 3:42:47 PM
Total Duration: 19m 4s

Phases

Queue: 19m 4s
Execution: -
Stage/Unstage: -