AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 15
Pass (FILTER=PASS): 0 (0.0%)
Fail (FILTER=FAIL): 15 (100.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 2
confidence_below_min(medium<high): 1
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 1
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1
Breakdown by confidence:
low: 0 pass, 8 fail (total: 8)
medium: 0 pass, 7 fail (total: 7)
Arriba filter: 15 rows -> 0 PASS; wrote SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt