Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1be272c77218f92ba26b10331da0f6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1be272c77218f92ba26b10331da0f6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/fa97925f41fec2c20e521626ac70f5/FFPE_V4_0001_RNA_0001_B23LG7FLT4_2_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/fa97925f41fec2c20e521626ac70f5/FFPE_V4_0001_RNA_0001_B23LG7FLT4_2_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory