Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/bbe611624705a76fa679deffec88ef/786-O_FFPE_RNA_0001_B23LG7FLT4_2/786-O_FFPE_RNA_0001_B23LG7FLT4_2_full_basic_stats.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/d393128dee6faf649e16599d828006/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/d393128dee6faf649e16599d828006/.command.sh
==> STAGING COMPLETE (3 inputs)

Processing SeqTools file: 786-O_FFPE_RNA_0001_B23LG7FLT4_2_full_basic_stats.tsv
Warning: scipy not available. GC bias calculation will be simplified.
Successfully converted 786-O_FFPE_RNA_0001_B23LG7FLT4_2_full_basic_stats.tsv to 786-O_FFPE_RNA_0001_B23LG7FLT4_2_seqtool_mqc.tsv
  Samples: 1
  SeqTools (general stats) columns: 18
  Metrics: reads, frac_unmapped, frac_dupes, unique_reads, frac_reads_on_target, frac_pairs_on_target, frac_reads_off_target, frac_pairs_off_target, reads_on_target, pairs_on_target, reads_off_target, pairs_off_target, mean_depth, q50_depth, frac_bases_gt30x, frac_bases_gt100x, n_q30, gc_bias