Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/15748ba429acd0101823ba9882acf8/OvarianND_FFPE_L03_RNA_01_B23LG7FLT4_1_R2.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/0bf17aca4d59864e267833f9a91438/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/0bf17aca4d59864e267833f9a91438/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/15748ba429acd0101823ba9882acf8/OvarianND_FFPE_L03_RNA_01_B23LG7FLT4_1_R1.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory