[W::hts_idx_load3] The index file is older than the data file: BT-20_FFPE_RNA_0001_B23LG7FLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	36420358
Known Splicing Events:	36004440
Partial Novel Splicing Events:	191578
Novel Splicing Events:	197938
Filtered Splicing Events:	26402

Total splicing  Junctions:	224363
Known Splicing Junctions:	173770
Partial Novel Splicing Junctions:	18486
Novel Splicing Junctions:	32107

===================================================================
Create BED file ...
Create Interact file ...