Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/9931b8402350e8eb9098fa23ce467a/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/9931b8402350e8eb9098fa23ce467a/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/22ced9b0dd4f79775e9f05aa9e9770/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/22ced9b0dd4f79775e9f05aa9e9770/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ea/7ae0417ca64cd752e041b073380633/BT-20_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.lDlSeYZwGy/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary -sample contains 81102162 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir -J /tmp/nxf.lDlSeYZwGy/BT-20_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction -O /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.lDlSeYZwGy/BT-20_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction -building interval tree based on /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=60000.00/min [30000], rate=64285.71/min [40000], rate=63157.89/min [50000], rate=63829.79/min [60000], rate=62068.97/min [70000], rate=48275.86/min [80000], rate=42105.26/min [90000], rate=37762.24/min [100000], rate=36363.64/min [110000], rate=34196.89/min [120000], rate=32579.19/min [130000], rate=32231.40/min [140000], rate=32183.91/min [150000], rate=31914.89/min [160000], rate=32214.77/min [170000], rate=32380.95/min [180000], rate=32432.43/min [190000], rate=32294.62/min [200000], rate=32085.56/min [210000], rate=32474.23/min [220000], rate=32432.43/min [230000], rate=32701.42/min [240000], rate=33103.45/min [250000], rate=33039.65/min [260000], rate=33121.02/min [270000], rate=33402.06/min [280000], rate=33667.33/min [290000], rate=33720.93/min [300000], rate=33834.59/min [310000], rate=34317.34/min [320000], rate=34719.71/min [330000], rate=34982.33/min [340000], rate=35478.26/min [350000], rate=35897.44/min [360000], rate=36000.00/min [370000], rate=35294.12/min [380000], rate=34337.35/min [390000], rate=34011.63/min [400000], rate=33660.59/min [410000], rate=33560.71/min [420000], rate=33201.58/min [430000], rate=32493.70/min [440000], rate=32038.83/min [450000], rate=31764.71/min [460000], rate=31651.38/min [470000], rate=31792.56/min [480000], rate=31753.03/min [490000], rate=31887.20/min [500000], rate=32119.91/min [510000], rate=32278.48/min [520000], rate=32198.14/min [530000], rate=32284.26/min [540000], rate=32497.49/min [550000], rate=32640.95/min [560000], rate=32748.54/min [570000], rate=33107.45/min [580000], rate=33333.33/min [590000], rate=33522.73/min [600000], rate=33771.11/min [610000], rate=34014.87/min [620000], rate=34159.78/min [630000], rate=34394.90/min [640000], rate=34532.37/min [650000], rate=34759.36/min [660000], rate=34982.33/min [670000], rate=34506.44/min [680000], rate=34228.19/min [690000], rate=33740.83/min [700000], rate=33573.14/min [710000], rate=33490.57/min [720000], rate=33281.97/min [730000], rate=33257.40/min [740000], rate=33011.15/min [750000], rate=32942.90/min [760000], rate=32971.80/min [770000], rate=32976.45/min [780000], rate=33027.52/min [790000], rate=33100.56/min [800000], rate=33126.29/min [810000], rate=33196.72/min [820000], rate=33265.72/min [830000], rate=33288.77/min [840000], rate=33311.30/min [850000], rate=33268.10/min [860000], rate=33226.01/min [870000], rate=33290.82/min [880000], rate=33312.30/min [890000], rate=33395.87/min [900000], rate=33477.99/min [910000], rate=33579.34/min [920000], rate=33617.54/min [930000], rate=33716.01/min [940000], rate=33772.46/min [950000], rate=33847.98/min [960000], rate=34042.55/min [970000], rate=34195.06/min [980000], rate=34325.74/min [990000], rate=34494.77/min [1000000], rate=34502.59/min [1010000], rate=34648.37/min [1020000], rate=34792.50/min [1030000], rate=34621.85/min [1040000], rate=34551.50/min [1050000], rate=34501.64/min [1060000], rate=34490.24/min [1070000], rate=34442.06/min [1080000], rate=34267.58/min [1090000], rate=34276.73/min [1100000], rate=34357.11/min [1110000], rate=34347.60/min [1120000], rate=34390.99/min [1130000], rate=34433.72/min [1140000], rate=34510.60/min [1150000], rate=34569.14/min [1160000], rate=34644.10/min [1170000], rate=34786.92/min [1180000], rate=34894.04/min [1190000], rate=35017.17/min [1200000], rate=35156.25/min [1210000], rate=35311.28/min [1220000], rate=35447.94/min [1230000], rate=35514.92/min [1240000], rate=35530.09/min [1250000], rate=35460.99/min [1260000], rate=35476.30/min [1270000], rate=35524.48/min [1280000], rate=35489.83/min [1290000], rate=35504.59/min [1300000], rate=35600.18/min [1310000], rate=35678.62/min [1320000], rate=35675.68/min [1330000], rate=35720.68/min [1340000], rate=35765.12/min [1350000], rate=35809.02/min [1360000], rate=35836.63/min [1370000], rate=35910.88/min [1380000], rate=36015.66/min [1390000], rate=36088.27/min [1400000], rate=36129.03/min [1410000], rate=36200.26/min [1420000], rate=36270.75/min [1430000], rate=36309.78/min [1440000], rate=36471.08/min [1450000], rate=36554.62/min [1460000], rate=36668.06/min [1470000], rate=36780.65/min [1480000], rate=36846.47/min [1490000], rate=36972.70/min [1500000], rate=37113.40/min [1510000], rate=37237.98/min [1520000], rate=37331.15/min [1530000], rate=37317.07/min [1540000], rate=37348.42/min [1550000], rate=37364.40/min [1560000], rate=37380.19/min [1570000], rate=37410.64/min [1580000], rate=37514.84/min [1590000], rate=37500.00/min [1600000], rate=37500.00/min [1610000], rate=37529.14/min [1620000], rate=37543.45/min [1630000], rate=37615.38/min [1640000], rate=37672.28/min [1650000], rate=37743.04/min [1660000], rate=37827.57/min [1670000], rate=37854.17/min [1680000], rate=37923.25/min [1690000], rate=38034.51/min [1700000], rate=38130.84/min [1710000], rate=38226.53/min [1720000], rate=38335.81/min [1730000], rate=38472.94/min [1740000], rate=38566.68/min [1750000], rate=38645.56/min [1760000], rate=38752.29/min -building interval tree based on /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=21428.57/min [20000], rate=20338.98/min [30000], rate=18000.00/min [40000], rate=17266.19/min [50000], rate=16216.22/min [60000], rate=15720.52/min [70000], rate=15053.76/min [80000], rate=15189.87/min [90000], rate=15041.78/min [100000], rate=14563.11/min [110000], rate=14569.54/min [120000], rate=14754.10/min [130000], rate=15234.38/min [140000], rate=15469.61/min [150000], rate=15706.81/min [160000], rate=15841.58/min [170000], rate=16062.99/min [180000], rate=16463.41/min [190000], rate=16789.40/min [200000], rate=16997.17/min [210000], rate=17307.69/min [220000], rate=17623.50/min [230000], rate=17968.75/min [240000], rate=18320.61/min [250000], rate=18773.47/min [260000], rate=19188.19/min [270000], rate=19331.74/min [280000], rate=19695.19/min [290000], rate=20092.38/min [300000], rate=20316.03/min [310000], rate=20598.01/min [320000], rate=20645.16/min [330000], rate=20974.58/min [340000], rate=21361.26/min [350000], rate=21716.65/min [360000], rate=21973.55/min [370000], rate=22356.50/min [380000], rate=22709.16/min [390000], rate=23054.19/min [400000], rate=23460.41/min [410000], rate=23722.28/min [420000], rate=24022.88/min [430000], rate=24362.61/min [440000], rate=24695.98/min [450000], rate=25046.38/min [460000], rate=25367.65/min [470000], rate=25753.42/min [480000], rate=25945.95/min [490000], rate=25971.73/min [500000], rate=26132.40/min [510000], rate=26356.59/min [520000], rate=26553.19/min [530000], rate=26722.69/min [540000], rate=26865.67/min [550000], rate=27027.03/min [560000], rate=27206.48/min [570000], rate=27403.85/min [580000], rate=27575.28/min [590000], rate=27808.33/min [600000], rate=27972.03/min [610000], rate=28110.60/min [620000], rate=28288.97/min [630000], rate=28399.70/min [640000], rate=28507.80/min [650000], rate=28846.15/min [660000], rate=29268.29/min [670000], rate=29580.57/min [680000], rate=29824.56/min [690000], rate=30021.75/min [700000], rate=30259.37/min [710000], rate=30515.76/min [720000], rate=30813.12/min [730000], rate=30954.06/min [740000], rate=31179.78/min [750000], rate=31293.46/min [760000], rate=31383.34/min [770000], rate=31364.56/min [780000], rate=31578.95/min [790000], rate=31748.16/min [800000], rate=31957.39/min [810000], rate=31973.68/min [820000], rate=31989.60/min [830000], rate=32149.77/min [840000], rate=32474.23/min [850000], rate=32860.82/min [860000], rate=33161.95/min [870000], rate=33418.69/min [880000], rate=33609.17/min [890000], rate=33584.91/min [900000], rate=33792.24/min [910000], rate=34018.69/min [920000], rate=34095.12/min [930000], rate=34338.46/min [940000], rate=34453.27/min [950000], rate=34441.09/min [960000], rate=34491.02/min [970000], rate=34316.04/min [980000], rate=34345.79/min [990000], rate=34434.78/min [1000000], rate=34443.17/min [1010000], rate=34470.99/min [1020000], rate=34634.97/min [1030000], rate=34738.62/min [1040000], rate=34899.33/min [1050000], rate=34980.57/min [1060000], rate=35099.34/min [1070000], rate=35197.37/min [1080000], rate=35351.88/min [1090000], rate=35485.62/min [1100000], rate=35617.92/min [1110000], rate=35748.79/min [1120000], rate=35916.62/min [1130000], rate=35987.26/min [1140000], rate=36018.96/min [1150000], rate=36106.75/min [1160000], rate=36174.64/min [1170000], rate=36260.33/min [1180000], rate=36326.32/min [1190000], rate=36354.38/min [1200000], rate=36455.70/min [1210000], rate=36574.31/min [1220000], rate=36600.00/min [1230000], rate=36716.42/min [1240000], rate=36868.19/min [1250000], rate=36782.74/min [1260000], rate=36363.64/min [1270000], rate=36096.64/min [1280000], rate=35938.23/min [1290000], rate=35618.96/min [1300000], rate=35454.55/min [1310000], rate=35325.84/min [1320000], rate=35215.65/min [1330000], rate=35138.71/min [1340000], rate=35017.42/min [1350000], rate=34974.09/min [1360000], rate=34901.63/min [1370000], rate=34874.84/min [1380000], rate=34921.97/min [1390000], rate=34953.90/min [1400000], rate=34956.30/min [1410000], rate=34900.99/min [1420000], rate=34946.68/min [1430000], rate=34991.84/min [1440000], rate=35022.29/min [1450000], rate=35038.26/min [1460000], rate=35068.05/min [1470000], rate=35041.72/min [1480000], rate=35071.09/min [1490000], rate=35127.70/min [1500000], rate=35115.10/min [1510000], rate=35157.16/min [1520000], rate=35171.62/min [1530000], rate=35253.46/min [1540000], rate=35361.65/min [1550000], rate=35469.11/min [1560000], rate=35562.31/min [1570000], rate=35668.31/min [1580000], rate=35787.09/min [1590000], rate=35797.37/min [1600000], rate=35740.88/min [1610000], rate=35711.65/min [1620000], rate=35682.82/min [1630000], rate=35693.43/min [1640000], rate=35716.88/min [1650000], rate=35714.29/min [1660000], rate=35750.18/min [1670000], rate=35811.29/min [1680000], rate=35846.37/min [1690000], rate=35919.23/min [1700000], rate=35978.84/min [1710000], rate=36037.93/min [1720000], rate=36096.54/min [1730000], rate=36167.25/min [1740000], rate=36224.84/min [1750000], rate=36281.96/min [1760000], rate=36363.64/min [1770000], rate=36457.26/min -building interval tree based on /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=46153.85/min [30000], rate=50000.00/min [40000], rate=51063.83/min [50000], rate=47619.05/min [60000], rate=47368.42/min [70000], rate=47727.27/min [80000], rate=48000.00/min [90000], rate=46956.52/min [100000], rate=44776.12/min [110000], rate=45205.48/min [120000], rate=45859.87/min [130000], rate=45614.04/min [140000], rate=44919.79/min [150000], rate=44334.98/min [160000], rate=44036.70/min [170000], rate=43589.74/min [180000], rate=43902.44/min [190000], rate=44705.88/min [200000], rate=45454.55/min [210000], rate=45487.36/min [220000], rate=45051.19/min [230000], rate=43670.89/min [240000], rate=42729.97/min [250000], rate=41322.31/min [260000], rate=41052.63/min [270000], rate=40909.09/min [280000], rate=40677.97/min [290000], rate=40845.07/min [300000], rate=40909.09/min [310000], rate=41517.86/min [320000], rate=41648.59/min [330000], rate=41684.21/min [340000], rate=41379.31/min [350000], rate=41749.50/min [360000], rate=42105.26/min [370000], rate=42366.41/min [380000], rate=42300.56/min [390000], rate=42545.45/min [400000], rate=42477.88/min [410000], rate=41554.05/min [420000], rate=41379.31/min [430000], rate=41214.06/min [440000], rate=41057.54/min [450000], rate=40847.20/min [460000], rate=40648.01/min [470000], rate=40459.11/min [480000], rate=40223.46/min [490000], rate=40109.14/min [500000], rate=40268.46/min [510000], rate=40369.39/min [520000], rate=40362.23/min [530000], rate=40202.28/min [540000], rate=40248.45/min [550000], rate=40540.54/min [560000], rate=40875.91/min [570000], rate=41105.77/min [580000], rate=41134.75/min [590000], rate=41162.79/min [600000], rate=40540.54/min [610000], rate=40000.00/min [620000], rate=39914.16/min [630000], rate=39664.22/min [640000], rate=39628.48/min [650000], rate=39156.63/min [660000], rate=39091.81/min [670000], rate=39029.13/min [680000], rate=39080.46/min [690000], rate=38873.24/min [700000], rate=38461.54/min [710000], rate=38447.65/min [720000], rate=38537.02/min [730000], rate=38488.58/min [740000], rate=38474.87/min [750000], rate=38428.69/min [760000], rate=38127.09/min [770000], rate=37837.84/min [780000], rate=37711.52/min [790000], rate=37529.69/min [800000], rate=37354.09/min [810000], rate=37298.54/min [820000], rate=37386.02/min [830000], rate=37500.00/min [840000], rate=37444.28/min [850000], rate=37555.23/min [860000], rate=37472.77/min [870000], rate=37312.37/min [880000], rate=37130.80/min [890000], rate=37109.10/min [900000], rate=37215.71/min [910000], rate=37193.46/min [920000], rate=37096.77/min [930000], rate=37076.41/min [940000], rate=37105.26/min [950000], rate=37206.27/min [960000], rate=37378.33/min [970000], rate=37500.00/min [980000], rate=37619.96/min [990000], rate=37264.74/min [1000000], rate=36697.25/min [1010000], rate=36222.36/min [1020000], rate=36000.00/min [1030000], rate=35784.60/min [1040000], rate=35575.83/min [1050000], rate=35472.97/min [1060000], rate=35313.71/min [1070000], rate=35158.82/min [1080000], rate=35121.95/min [1090000], rate=35048.23/min [1100000], rate=35031.85/min [1110000], rate=34997.37/min [1120000], rate=34945.40/min [1130000], rate=34948.45/min [1140000], rate=34933.61/min [1150000], rate=34919.03/min [1160000], rate=34904.71/min [1170000], rate=34995.01/min [1180000], rate=35049.50/min [1190000], rate=34965.72/min [1200000], rate=34985.42/min [1210000], rate=34971.10/min [1220000], rate=34973.72/min [1230000], rate=34943.18/min [1240000], rate=34995.30/min [1250000], rate=35063.11/min [1260000], rate=35146.44/min [1270000], rate=35261.45/min [1280000], rate=35342.84/min [1290000], rate=35407.14/min [1300000], rate=35406.26/min [1310000], rate=35485.33/min [1320000], rate=35595.51/min [1330000], rate=35688.73/min [1340000], rate=35701.60/min [1350000], rate=35793.19/min [1360000], rate=35947.14/min [1370000], rate=36036.83/min [1380000], rate=36078.43/min [1390000], rate=36166.52/min [1400000], rate=36285.10/min [1410000], rate=36402.75/min [1420000], rate=36503.86/min [1430000], rate=36635.35/min [1440000], rate=36455.70/min [1450000], rate=36280.23/min [1460000], rate=36079.08/min [1470000], rate=35985.31/min [1480000], rate=35777.60/min [1490000], rate=35645.93/min [1500000], rate=35502.96/min [1510000], rate=35390.62/min [1520000], rate=35280.46/min [1530000], rate=35172.41/min [1540000], rate=35106.38/min [1550000], rate=35028.25/min [1560000], rate=34964.51/min [1570000], rate=34888.89/min [1580000], rate=34852.94/min [1590000], rate=34842.95/min [1600000], rate=34883.72/min [1610000], rate=34924.08/min [1620000], rate=34926.34/min [1630000], rate=34966.04/min [1640000], rate=34992.89/min [1650000], rate=35031.85/min [1660000], rate=35070.42/min [1670000], rate=35145.56/min [1680000], rate=35207.82/min [1690000], rate=35269.57/min [1700000], rate=35343.04/min [1710000], rate=35428.18/min [1720000], rate=35524.96/min [1730000], rate=35621.14/min [1740000], rate=35765.67/min [1750000], rate=35872.91/min [1760000], rate=35760.24/min -building interval tree based on /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=85714.29/min [30000], rate=56250.00/min [40000], rate=54545.45/min [50000], rate=58823.53/min [60000], rate=62068.97/min [70000], rate=62686.57/min [80000], rate=67605.63/min [90000], rate=69230.77/min [100000], rate=69767.44/min [110000], rate=75000.00/min [120000], rate=74226.80/min [130000], rate=72222.22/min [140000], rate=71186.44/min [150000], rate=69767.44/min [160000], rate=70588.24/min [170000], rate=68000.00/min [180000], rate=67924.53/min [190000], rate=69512.20/min [200000], rate=71005.92/min [210000], rate=70000.00/min [220000], rate=72527.47/min [230000], rate=72251.31/min [240000], rate=70935.96/min [250000], rate=71090.05/min [260000], rate=71559.63/min [270000], rate=72645.74/min [280000], rate=72413.79/min [290000], rate=71900.83/min [300000], rate=70588.24/min [310000], rate=69924.81/min [320000], rate=70588.24/min [330000], rate=69964.66/min [340000], rate=69624.57/min [350000], rate=69078.95/min [360000], rate=68571.43/min [370000], rate=68944.10/min [380000], rate=69090.91/min [390000], rate=68823.53/min [400000], rate=68965.52/min [410000], rate=67397.26/min [420000], rate=67379.68/min [430000], rate=67894.74/min [440000], rate=66835.44/min [450000], rate=65853.66/min [460000], rate=58474.58/min [470000], rate=53714.29/min [480000], rate=49740.93/min [490000], rate=46740.86/min [500000], rate=44052.86/min [510000], rate=41746.25/min [520000], rate=39443.74/min [530000], rate=37767.22/min [540000], rate=36610.17/min [550000], rate=35522.07/min [560000], rate=34603.50/min [570000], rate=33203.88/min [580000], rate=32252.09/min [590000], rate=31382.98/min [600000], rate=30586.24/min [610000], rate=30000.00/min [620000], rate=29407.11/min [630000], rate=29076.92/min [640000], rate=28656.72/min [650000], rate=28384.28/min [660000], rate=28125.00/min [670000], rate=27936.07/min [680000], rate=27623.56/min [690000], rate=27471.80/min [700000], rate=27450.98/min [710000], rate=27290.20/min [720000], rate=27050.72/min [730000], rate=27020.36/min [740000], rate=26974.48/min [750000], rate=26801.67/min [760000], rate=26823.53/min [770000], rate=26829.27/min [780000], rate=26773.46/min [790000], rate=26734.35/min [800000], rate=26740.95/min [810000], rate=26806.40/min [820000], rate=26914.66/min [830000], rate=26991.87/min [840000], rate=27096.77/min [850000], rate=27258.15/min [860000], rate=27388.54/min [870000], rate=27517.13/min [880000], rate=27615.06/min [890000], rate=27725.86/min [900000], rate=27921.41/min [910000], rate=28086.42/min [920000], rate=28249.74/min [930000], rate=28411.41/min [940000], rate=28571.43/min [950000], rate=28773.35/min [960000], rate=28944.72/min [970000], rate=28998.51/min [980000], rate=29051.38/min [990000], rate=29103.38/min [1000000], rate=29182.88/min [1010000], rate=29204.82/min [1020000], rate=29212.41/min [1030000], rate=29275.23/min [1040000], rate=29282.03/min [1050000], rate=29411.76/min [1060000], rate=29499.07/min [1070000], rate=29558.01/min [1080000], rate=29616.09/min [1090000], rate=29700.27/min [1100000], rate=29796.84/min [1110000], rate=29905.70/min [1120000], rate=30013.40/min [1130000], rate=30106.57/min [1140000], rate=30305.72/min [1150000], rate=30490.50/min [1160000], rate=30647.29/min [1170000], rate=30789.47/min [1180000], rate=30863.12/min [1190000], rate=31029.99/min [1200000], rate=31182.33/min [1210000], rate=31320.10/min [1220000], rate=31456.81/min [1230000], rate=31592.47/min [1240000], rate=31619.21/min [1250000], rate=31367.63/min [1260000], rate=31252.58/min [1270000], rate=31178.40/min [1280000], rate=31017.77/min [1290000], rate=30812.10/min [1300000], rate=30708.66/min [1310000], rate=30691.14/min [1320000], rate=30685.78/min [1330000], rate=30633.40/min [1340000], rate=30547.11/min [1350000], rate=30496.99/min [1360000], rate=30527.50/min [1370000], rate=30557.62/min [1380000], rate=30576.07/min [1390000], rate=30583.06/min [1400000], rate=30623.41/min [1410000], rate=30663.28/min [1420000], rate=30713.77/min [1430000], rate=30763.71/min [1440000], rate=30824.12/min [1450000], rate=30894.89/min [1460000], rate=30997.88/min [1470000], rate=31100.14/min [1480000], rate=31223.63/min [1490000], rate=31335.44/min [1500000], rate=31413.61/min [1510000], rate=31534.98/min [1520000], rate=31633.71/min [1530000], rate=31731.77/min [1540000], rate=31851.09/min [1550000], rate=31958.76/min [1560000], rate=32032.85/min [1570000], rate=31986.42/min [1580000], rate=31940.70/min [1590000], rate=31927.71/min [1600000], rate=31946.76/min [1610000], rate=31976.17/min [1620000], rate=32005.27/min [1630000], rate=32034.06/min [1640000], rate=32083.47/min [1650000], rate=32090.76/min [1660000], rate=32118.67/min [1670000], rate=32166.93/min [1680000], rate=32225.06/min [1690000], rate=32292.99/min [1700000], rate=32339.89/min [1710000], rate=32417.06/min [1720000], rate=32524.42/min [1730000], rate=32610.74/min [1740000], rate=32696.52/min [1750000], rate=32792.00/min [1760000], rate=32886.95/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir --filt_file /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 6000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 7500000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5454545.45 reads per min processed... 5500000.00 reads per min processed... 5538461.54 reads per min processed... 5200000.00 reads per min processed... 5250000.00 reads per min processed... 5294117.65 reads per min processed... 5333333.33 reads per min processed... 5368421.05 reads per min processed... 5142857.14 reads per min processed... 5181818.18 reads per min processed... 5000000.00 reads per min processed... 4846153.85 reads per min processed... 4888888.89 reads per min processed... 4928571.43 reads per min processed... 4800000.00 reads per min processed... 4838709.68 reads per min processed... 4875000.00 reads per min processed... 4909090.91 reads per min processed... 4941176.47 reads per min processed... 4971428.57 reads per min processed... 4864864.86 reads per min processed... 4894736.84 reads per min processed... 4923076.92 reads per min processed... 5076923.08 reads per min processed... 5100000.00 reads per min processed... 5121951.22 reads per min processed... 5142857.14 reads per min processed... 5162790.70 reads per min processed... 5181818.18 reads per min processed... 5200000.00 reads per min processed... 5217391.30 reads per min processed... 5234042.55 reads per min processed... 5250000.00 reads per min processed... 5160000.00 reads per min processed... 5176470.59 reads per min processed... 5192307.69 reads per min processed... 5207547.17 reads per min processed... 5222222.22 reads per min processed... 5142857.14 reads per min processed... 5157894.74 reads per min processed... 5172413.79 reads per min processed... 5186440.68 reads per min processed... 5114754.10 reads per min processed... 5129032.26 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.lDlSeYZwGy/BT-20_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -211967.263820 EM: Round [1] log likelihood: -211796.502444 EM: Round [2] log likelihood: -211724.411366 EM: Round [3] log likelihood: -211687.824397 EM: Round [4] log likelihood: -211667.703457 EM: Round [5] log likelihood: -211656.154215 EM: Round [6] log likelihood: -211649.283958 EM: Round [7] log likelihood: -211645.042427 EM: Round [8] log likelihood: -211642.322630 EM: Round [9] log likelihood: -211640.514054 EM: Round [10] log likelihood: -211639.270713 EM: Round [11] log likelihood: -211638.390190 EM: Round [12] log likelihood: -211637.750051 EM: Round [13] log likelihood: -211637.273802 EM: Round [14] log likelihood: -211636.912175 EM: Round [15] log likelihood: -211636.632556 EM: Round [16] log likelihood: -211636.412809 EM: Round [17] log likelihood: -211636.237575 EM: Round [18] log likelihood: -211636.095987 EM: Round [19] log likelihood: -211635.980217 EM: Round [20] log likelihood: -211635.884535 EM: Round [21] log likelihood: -211635.804684 EM: Round [22] log likelihood: -211635.737461 EM: Round [23] log likelihood: -211635.680420 EM: Round [24] log likelihood: -211635.631676 EM: Round [25] log likelihood: -211635.589754 EM: Round [26] log likelihood: -211635.553494 EM: Round [27] log likelihood: -211635.521967 EM: Round [28] log likelihood: -211635.494429 EM: Round [29] log likelihood: -211635.470272 EM: Round [30] log likelihood: -211635.449002 EM: Round [31] log likelihood: -211635.430207 EM: Round [32] log likelihood: -211635.413547 EM: Round [33] log likelihood: -211635.398736 EM: Round [34] log likelihood: -211635.385533 EM: Round [35] log likelihood: -211635.373736 EM: Round [36] log likelihood: -211635.363169 EM: Round [37] log likelihood: -211635.353684 EM: Round [38] log likelihood: -211635.345152 EM: Round [39] log likelihood: -211635.337464 EM: Round [40] log likelihood: -211635.330523 EM: Round [41] log likelihood: -211635.324245 EM: Round [42] log likelihood: -211635.318558 EM: Round [43] log likelihood: -211635.313398 EM: Round [44] log likelihood: -211635.308709 EM: Round [45] log likelihood: -211635.304441 EM: Round [46] log likelihood: -211635.300552 EM: Round [47] log likelihood: -211635.297002 EM: Round [48] log likelihood: -211635.293757 EM: Round [49] log likelihood: -211635.290789 EM: Round [50] log likelihood: -211635.288068 EM: Round [51] log likelihood: -211635.285572 EM: Round [52] log likelihood: -211635.283280 EM: Round [53] log likelihood: -211635.281171 EM: Round [54] log likelihood: -211635.279230 EM: Round [55] log likelihood: -211635.277440 EM: Round [56] log likelihood: -211635.275788 EM: Round [57] log likelihood: -211635.274262 EM: Round [58] log likelihood: -211635.272851 EM: Round [59] log likelihood: -211635.271544 EM: Round [60] log likelihood: -211635.270333 EM: Round [61] log likelihood: -211635.269210 EM: Round [62] log likelihood: -211635.268166 EM: Round [63] log likelihood: -211635.267196 EM: Round [64] log likelihood: -211635.266294 EM: Round [65] log likelihood: -211635.265453 EM: Round [66] log likelihood: -211635.264670 EM: Round [67] log likelihood: -211635.263939 EM: Round [68] log likelihood: -211635.263256 EM: Round [69] log likelihood: -211635.262618 EM: Round [70] log likelihood: -211635.262022 EM: Round [71] log likelihood: -211635.261463 EM: Round [72] log likelihood: -211635.260940 EM: Round [73] log likelihood: -211635.260449 EM: Round [74] log likelihood: -211635.259989 EM: Round [75] log likelihood: -211635.259556 EM: Round [76] log likelihood: -211635.259150 EM: Round [77] log likelihood: -211635.258768 EM: Round [78] log likelihood: -211635.258409 EM: Round [79] log likelihood: -211635.258070 EM: Round [80] log likelihood: -211635.257752 EM: Round [81] log likelihood: -211635.257451 EM: Round [82] log likelihood: -211635.257168 EM: Round [83] log likelihood: -211635.256900 EM: Round [84] log likelihood: -211635.256647 EM: Round [85] log likelihood: -211635.256408 EM: Round [86] log likelihood: -211635.256183 EM: Round [87] log likelihood: -211635.255969 EM: Round [88] log likelihood: -211635.255767 EM: Round [89] log likelihood: -211635.255575 EM: Round [90] log likelihood: -211635.255394 EM: Round [91] log likelihood: -211635.255221 EM: Round [92] log likelihood: -211635.255058 EM: Round [93] log likelihood: -211635.254903 EM: Round [94] log likelihood: -211635.254756 EM: Round [95] log likelihood: -211635.254617 EM: Round [96] log likelihood: -211635.254484 EM: Round [97] log likelihood: -211635.254358 EM: Round [98] log likelihood: -211635.254238 EM: Round [99] log likelihood: -211635.254123 EM: Round [100] log likelihood: -211635.254015 EM: Round [101] log likelihood: -211635.253911 EM: Round [102] log likelihood: -211635.253812 EM: Stopping iterations at round 102 due to insufficient improvement in likelihood. EM: Starting log likelihood: -211708.826664 EM: Round [1] log likelihood: -211563.796094 EM: Round [2] log likelihood: -211505.924964 EM: Round [3] log likelihood: -211477.364650 EM: Round [4] log likelihood: -211461.863126 EM: Round [5] log likelihood: -211453.030183 EM: Round [6] log likelihood: -211447.808087 EM: Round [7] log likelihood: -211444.606972 EM: Round [8] log likelihood: -211442.572025 EM: Round [9] log likelihood: -211441.232315 EM: Round [10] log likelihood: -211440.321220 EM: Round [11] log likelihood: -211439.683121 EM: Round [12] log likelihood: -211439.224289 EM: Round [13] log likelihood: -211438.886510 EM: Round [14] log likelihood: -211438.632570 EM: Round [15] log likelihood: -211438.438034 EM: Round [16] log likelihood: -211438.286465 EM: Round [17] log likelihood: -211438.166561 EM: Round [18] log likelihood: -211438.070395 EM: Round [19] log likelihood: -211437.992304 EM: Round [20] log likelihood: -211437.928178 EM: Round [21] log likelihood: -211437.874988 EM: Round [22] log likelihood: -211437.830468 EM: Round [23] log likelihood: -211437.792901 EM: Round [24] log likelihood: -211437.760973 EM: Round [25] log likelihood: -211437.733659 EM: Round [26] log likelihood: -211437.710158 EM: Round [27] log likelihood: -211437.689832 EM: Round [28] log likelihood: -211437.672171 EM: Round [29] log likelihood: -211437.656763 EM: Round [30] log likelihood: -211437.643269 EM: Round [31] log likelihood: -211437.631412 EM: Round [32] log likelihood: -211437.620963 EM: Round [33] log likelihood: -211437.611728 EM: Round [34] log likelihood: -211437.603547 EM: Round [35] log likelihood: -211437.596282 EM: Round [36] log likelihood: -211437.589817 EM: Round [37] log likelihood: -211437.584053 EM: Round [38] log likelihood: -211437.578905 EM: Round [39] log likelihood: -211437.574299 EM: Round [40] log likelihood: -211437.570171 EM: Round [41] log likelihood: -211437.566466 EM: Round [42] log likelihood: -211437.563137 EM: Round [43] log likelihood: -211437.560140 EM: Round [44] log likelihood: -211437.557439 EM: Round [45] log likelihood: -211437.555002 EM: Round [46] log likelihood: -211437.552801 EM: Round [47] log likelihood: -211437.550809 EM: Round [48] log likelihood: -211437.549006 EM: Round [49] log likelihood: -211437.547371 EM: Round [50] log likelihood: -211437.545887 EM: Round [51] log likelihood: -211437.544539 EM: Round [52] log likelihood: -211437.543312 EM: Round [53] log likelihood: -211437.542195 EM: Round [54] log likelihood: -211437.541177 EM: Round [55] log likelihood: -211437.540248 EM: Round [56] log likelihood: -211437.539399 EM: Round [57] log likelihood: -211437.538622 EM: Round [58] log likelihood: -211437.537912 EM: Round [59] log likelihood: -211437.537261 EM: Round [60] log likelihood: -211437.536663 EM: Round [61] log likelihood: -211437.536115 EM: Round [62] log likelihood: -211437.535610 EM: Round [63] log likelihood: -211437.535146 EM: Round [64] log likelihood: -211437.534719 EM: Round [65] log likelihood: -211437.534325 EM: Round [66] log likelihood: -211437.533961 EM: Round [67] log likelihood: -211437.533625 EM: Round [68] log likelihood: -211437.533314 EM: Round [69] log likelihood: -211437.533026 EM: Round [70] log likelihood: -211437.532760 EM: Round [71] log likelihood: -211437.532513 EM: Round [72] log likelihood: -211437.532283 EM: Round [73] log likelihood: -211437.532069 EM: Round [74] log likelihood: -211437.531871 EM: Round [75] log likelihood: -211437.531686 EM: Round [76] log likelihood: -211437.531514 EM: Round [77] log likelihood: -211437.531353 EM: Round [78] log likelihood: -211437.531203 EM: Round [79] log likelihood: -211437.531063 EM: Round [80] log likelihood: -211437.530931 EM: Round [81] log likelihood: -211437.530808 EM: Round [82] log likelihood: -211437.530693 EM: Round [83] log likelihood: -211437.530585 EM: Round [84] log likelihood: -211437.530484 EM: Round [85] log likelihood: -211437.530388 EM: Stopping iterations at round 85 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 81102162 > /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir > /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir --annotate /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir -done, see /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1042, filtered: 9219) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.lDlSeYZwGy/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.lDlSeYZwGy/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000200794.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000247809.9] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287410.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000245322.7] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000184991.3] WARNING, no entry stored in dbm for [ENSG00000223486.1] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000257242.8] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000204338.8] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000203993.6] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000237351.1] WARNING, no entry stored in dbm for [ENSG00000206573.9] WARNING, no entry stored in dbm for [ENSG00000228382.1] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000287424.1] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000214922.9] WARNING, no entry stored in dbm for [ENSG00000247828.8] WARNING, no entry stored in dbm for [ENSG00000215353.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000267107.8] WARNING, no entry stored in dbm for [ENSG00000181984.11] WARNING, no entry stored in dbm for [ENSG00000286694.1] WARNING, no entry stored in dbm for [ENSG00000237220.1] WARNING, no entry stored in dbm for [ENSG00000280145.3] WARNING, no entry stored in dbm for [ENSG00000267646.1] WARNING, no entry stored in dbm for [ENSG00000285077.2] WARNING, no entry stored in dbm for [ENSG00000197558.13] WARNING, no entry stored in dbm for [ENSG00000257846.2] WARNING, no entry stored in dbm for [ENSG00000272888.7] WARNING, no entry stored in dbm for [ENSG00000240350.3] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000283627.1] WARNING, no entry stored in dbm for [ENSG00000279903.1] WARNING, no entry stored in dbm for [ENSG00000271434.3] WARNING, no entry stored in dbm for [ENSG00000259036.1] WARNING, no entry stored in dbm for [ENSG00000251448.2] WARNING, no entry stored in dbm for [ENSG00000213332.4] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000200434.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000225733.6] WARNING, no entry stored in dbm for [ENSG00000226237.2] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000281641.3] WARNING, no entry stored in dbm for [ENSG00000254165.1] WARNING, no entry stored in dbm for [ENSG00000227081.5] WARNING, no entry stored in dbm for [ENSG00000214067.2] WARNING, no entry stored in dbm for [ENSG00000250608.2] WARNING, no entry stored in dbm for [ENSG00000279461.2] WARNING, no entry stored in dbm for [ENSG00000269155.2] WARNING, no entry stored in dbm for [ENSG00000243469.1] WARNING, no entry stored in dbm for [ENSG00000177640.16] WARNING, no entry stored in dbm for [ENSG00000242697.2] WARNING, no entry stored in dbm for [ENSG00000183122.5] WARNING, no entry stored in dbm for [ENSG00000251474.6] WARNING, no entry stored in dbm for [ENSG00000232612.1] WARNING, no entry stored in dbm for [ENSG00000219863.5] WARNING, no entry stored in dbm for [ENSG00000231731.7] WARNING, no entry stored in dbm for [ENSG00000237641.1] WARNING, no entry stored in dbm for [ENSG00000242814.2] WARNING, no entry stored in dbm for [ENSG00000215002.2] WARNING, no entry stored in dbm for [ENSG00000269244.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000242990.2] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000200645.1] WARNING, no entry stored in dbm for [ENSG00000176700.20] WARNING, no entry stored in dbm for [ENSG00000260565.7] WARNING, no entry stored in dbm for [ENSG00000243352.3] WARNING, no entry stored in dbm for [ENSG00000243562.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000243373.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000243541.3] WARNING, no entry stored in dbm for [ENSG00000239437.3] WARNING, no entry stored in dbm for [ENSG00000264618.2] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000264618.2] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000277483.1] WARNING, no entry stored in dbm for [ENSG00000240606.3] WARNING, no entry stored in dbm for [ENSG00000275014.1] WARNING, no entry stored in dbm for [ENSG00000244230.3] WARNING, no entry stored in dbm for [ENSG00000207269.1] WARNING, no entry stored in dbm for [ENSG00000201201.1] WARNING, no entry stored in dbm for [ENSG00000222617.1] WARNING, no entry stored in dbm for [ENSG00000222774.1] WARNING, no entry stored in dbm for [ENSG00000200131.1] WARNING, no entry stored in dbm for [ENSG00000256824.1] WARNING, no entry stored in dbm for [ENSG00000270165.1] WARNING, no entry stored in dbm for [ENSG00000249558.1] WARNING, no entry stored in dbm for [ENSG00000260772.1] WARNING, no entry stored in dbm for [ENSG00000197744.5] WARNING, no entry stored in dbm for [ENSG00000229981.8] WARNING, no entry stored in dbm for [ENSG00000230487.8] WARNING, no entry stored in dbm for [ENSG00000277287.1] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000229893.2] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000228940.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000286514.1] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000230701.2] WARNING, no entry stored in dbm for [ENSG00000236922.10] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000274452.1] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000222328.1] WARNING, no entry stored in dbm for [ENSG00000274585.1] WARNING, no entry stored in dbm for [ENSG00000252690.3] WARNING, no entry stored in dbm for [ENSG00000219470.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000280070.1] WARNING, no entry stored in dbm for [ENSG00000263766.5] WARNING, no entry stored in dbm for [ENSG00000238197.6] WARNING, no entry stored in dbm for [ENSG00000272267.2] WARNING, no entry stored in dbm for [ENSG00000267790.1] WARNING, no entry stored in dbm for [ENSG00000234763.3] WARNING, no entry stored in dbm for [ENSG00000285269.2] WARNING, no entry stored in dbm for [ENSG00000232634.1] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000179571.10] WARNING, no entry stored in dbm for [ENSG00000234145.1] WARNING, no entry stored in dbm for [ENSG00000236552.2] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000249119.1] WARNING, no entry stored in dbm for [ENSG00000198804.2] WARNING, no entry stored in dbm for [ENSG00000235524.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000233006.8] WARNING, no entry stored in dbm for [ENSG00000267151.5] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000253408.6] WARNING, no entry stored in dbm for [ENSG00000281731.3] WARNING, no entry stored in dbm for [ENSG00000255244.1] WARNING, no entry stored in dbm for [ENSG00000272701.3] WARNING, no entry stored in dbm for [ENSG00000218226.1] WARNING, no entry stored in dbm for [ENSG00000254934.5] WARNING, no entry stored in dbm for [ENSG00000267908.2] WARNING, no entry stored in dbm for [ENSG00000286295.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000204362.6] WARNING, no entry stored in dbm for [ENSG00000274317.2] WARNING, no entry stored in dbm for [ENSG00000250456.1] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000232931.6] WARNING, no entry stored in dbm for [ENSG00000226320.6] WARNING, no entry stored in dbm for [ENSG00000232100.1] WARNING, no entry stored in dbm for [ENSG00000253301.6] WARNING, no entry stored in dbm for [ENSG00000237339.5] WARNING, no entry stored in dbm for [ENSG00000279141.3] WARNING, no entry stored in dbm for [ENSG00000226891.9] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000235437.8] WARNING, no entry stored in dbm for [ENSG00000163364.10] WARNING, no entry stored in dbm for [ENSG00000261455.1] WARNING, no entry stored in dbm for [ENSG00000267586.7] WARNING, no entry stored in dbm for [ENSG00000232677.9] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000260807.7] WARNING, no entry stored in dbm for [ENSG00000251654.2] WARNING, no entry stored in dbm for [ENSG00000226967.1] WARNING, no entry stored in dbm for [ENSG00000214514.8] WARNING, no entry stored in dbm for [ENSG00000267325.2] WARNING, no entry stored in dbm for [ENSG00000266335.1] WARNING, no entry stored in dbm for [ENSG00000272267.2] WARNING, no entry stored in dbm for [ENSG00000272288.6] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000228043.5] WARNING, no entry stored in dbm for [ENSG00000225636.1] WARNING, no entry stored in dbm for [ENSG00000241420.3] WARNING, no entry stored in dbm for [ENSG00000243188.1] WARNING, no entry stored in dbm for [ENSG00000237285.1] WARNING, no entry stored in dbm for [ENSG00000233606.2] WARNING, no entry stored in dbm for [ENSG00000280138.1] WARNING, no entry stored in dbm for [ENSG00000261716.2] WARNING, no entry stored in dbm for [ENSG00000232829.3] WARNING, no entry stored in dbm for [ENSG00000249353.2] WARNING, no entry stored in dbm for [ENSG00000239533.6] WARNING, no entry stored in dbm for [ENSG00000287424.1] WARNING, no entry stored in dbm for [ENSG00000228376.3] WARNING, no entry stored in dbm for [ENSG00000233264.2] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000232057.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000224346.1] WARNING, no entry stored in dbm for [ENSG00000285813.1] WARNING, no entry stored in dbm for [ENSG00000204860.5] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000224865.8] WARNING, no entry stored in dbm for [ENSG00000271855.1] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000274408.1] WARNING, no entry stored in dbm for [ENSG00000258454.1] WARNING, no entry stored in dbm for [ENSG00000227611.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000267254.7] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000256029.6] WARNING, no entry stored in dbm for [ENSG00000286806.1] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000200972.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000203364.2] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000286186.1] WARNING, no entry stored in dbm for [ENSG00000279232.2] WARNING, no entry stored in dbm for [ENSG00000233441.6] WARNING, no entry stored in dbm for [ENSG00000245694.10] WARNING, no entry stored in dbm for [ENSG00000287762.1] WARNING, no entry stored in dbm for [ENSG00000223799.1] WARNING, no entry stored in dbm for [ENSG00000177369.9] WARNING, no entry stored in dbm for [ENSG00000174403.16] WARNING, no entry stored in dbm for [ENSG00000271088.1] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000288569.1] WARNING, no entry stored in dbm for [ENSG00000230383.1] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000225670.4] WARNING, no entry stored in dbm for [ENSG00000213355.3] WARNING, no entry stored in dbm for [ENSG00000286176.2] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000205930.10] WARNING, no entry stored in dbm for [ENSG00000231069.1] WARNING, no entry stored in dbm for [ENSG00000234585.6] WARNING, no entry stored in dbm for [ENSG00000285417.1] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000279236.1] WARNING, no entry stored in dbm for [ENSG00000201628.1] WARNING, no entry stored in dbm for [ENSG00000213851.3] WARNING, no entry stored in dbm for [ENSG00000279021.1] WARNING, no entry stored in dbm for [ENSG00000237506.3] WARNING, no entry stored in dbm for [ENSG00000231365.6] WARNING, no entry stored in dbm for [ENSG00000258376.2] WARNING, no entry stored in dbm for [ENSG00000267189.1] WARNING, no entry stored in dbm for [ENSG00000268879.1] WARNING, no entry stored in dbm for [ENSG00000263667.3] WARNING, no entry stored in dbm for [ENSG00000267646.1] WARNING, no entry stored in dbm for [ENSG00000246090.7] WARNING, no entry stored in dbm for [ENSG00000213252.3] WARNING, no entry stored in dbm for [ENSG00000245008.4] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000286643.1] WARNING, no entry stored in dbm for [ENSG00000287424.1] WARNING, no entry stored in dbm for [ENSG00000231801.2] WARNING, no entry stored in dbm for [ENSG00000277878.1] WARNING, no entry stored in dbm for [ENSG00000280414.1] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000230021.10] WARNING, no entry stored in dbm for [ENSG00000224865.8] WARNING, no entry stored in dbm for [ENSG00000230699.2] WARNING, no entry stored in dbm for [ENSG00000255680.1] WARNING, no entry stored in dbm for [ENSG00000239906.1] WARNING, no entry stored in dbm for [ENSG00000284999.1] WARNING, no entry stored in dbm for [ENSG00000170161.7] WARNING, no entry stored in dbm for [ENSG00000231212.1] WARNING, no entry stored in dbm for [ENSG00000277496.1] WARNING, no entry stored in dbm for [ENSG00000270066.3] WARNING, no entry stored in dbm for [ENSG00000279608.1] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000242163.1] WARNING, no entry stored in dbm for [ENSG00000276649.1] WARNING, no entry stored in dbm for [ENSG00000277301.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000278987.1] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000286681.1] WARNING, no entry stored in dbm for [ENSG00000286681.1] WARNING, no entry stored in dbm for [ENSG00000286681.1] WARNING, no entry stored in dbm for [ENSG00000286681.1] WARNING, no entry stored in dbm for [ENSG00000286681.1] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000255085.8] WARNING, no entry stored in dbm for [ENSG00000258805.2] WARNING, no entry stored in dbm for [ENSG00000161912.18] WARNING, no entry stored in dbm for [ENSG00000270661.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000260312.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000256008.3] WARNING, no entry stored in dbm for [ENSG00000287424.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000279273.1] WARNING, no entry stored in dbm for [ENSG00000237135.1] WARNING, no entry stored in dbm for [ENSG00000287952.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000260290.2] WARNING, no entry stored in dbm for [ENSG00000242477.1] WARNING, no entry stored in dbm for [ENSG00000242407.1] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000284783.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000268895.6] WARNING, no entry stored in dbm for [ENSG00000264164.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000266356.1] WARNING, no entry stored in dbm for [ENSG00000213650.3] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000258119.1] WARNING, no entry stored in dbm for [ENSG00000255487.1] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000237087.1] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000287431.1] WARNING, no entry stored in dbm for [ENSG00000287431.1] WARNING, no entry stored in dbm for [ENSG00000287431.1] WARNING, no entry stored in dbm for [ENSG00000286934.1] WARNING, no entry stored in dbm for [ENSG00000286646.1] WARNING, no entry stored in dbm for [ENSG00000267070.1] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000268516.2] WARNING, no entry stored in dbm for [ENSG00000267078.1] WARNING, no entry stored in dbm for [ENSG00000262202.4] WARNING, no entry stored in dbm for [ENSG00000204929.13] WARNING, no entry stored in dbm for [ENSG00000267469.1] WARNING, no entry stored in dbm for [ENSG00000287374.1] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000266378.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000255306.1] WARNING, no entry stored in dbm for [ENSG00000232759.1] WARNING, no entry stored in dbm for [ENSG00000225722.1] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000279569.1] * STAR-Fusion complete. See output: /tmp/nxf.lDlSeYZwGy/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)