Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (MCF7_FFPE_RNA_0001_B23LG7FLT4_1)
Attempt
2
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/3b77f31a1a30e870769692af71c892

Files (32)

Name Size Modified
.command.begin 6 bytes May 28, 2026 2:40 PM
.command.err 42.5 KB May 28, 2026 4:11 PM
.command.log 43.9 KB May 28, 2026 4:11 PM
.command.out 453 bytes May 28, 2026 4:11 PM
.command.run 15.0 KB May 28, 2026 2:40 PM
.command.sh 1.2 KB May 28, 2026 2:40 PM
.command.trace 314 bytes May 28, 2026 4:11 PM
.command.yaml 3.8 KB May 28, 2026 2:40 PM
.exitcode 1 byte May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.cancer.introns 633.7 KB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.cancer.introns.prelim 1.3 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.cancer_intron_reads.sorted.bam 7.0 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.bai 1.5 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/MCF7_FFPE_RNA_0001_B23LG7FLT4_1.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/MCF7_FFPE_RNA_0001_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/MCF7_FFPE_RNA_0001_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/MCF7_FFPE_RNA_0001_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/igv_create_html.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/intron_igv_bed.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/introns.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/introns_filtered.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/prelim_introns.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/reads_alignments_extracted.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/sort_cancer_intron_reads.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.chckpts/sort_gene_reads.ok 0 bytes May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.ctat-splicing.igv.html 1.2 GB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.gene_reads.sorted.sifted.bam 715.4 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.gene_reads.sorted.sifted.bam.bai 1.9 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.igv.tracks 1.0 KB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.introns 15.4 MB May 28, 2026 4:11 PM
MCF7_FFPE_RNA_0001_B23LG7FLT4_1.introns.for_IGV.bed 5.9 MB May 28, 2026 4:11 PM
versions.yml 88 bytes May 28, 2026 4:11 PM