Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/a83e11ec921239ade814d9b0b97f77/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/4a53430fbe12d374c5dd3dff63faa4/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/a83e11ec921239ade814d9b0b97f77/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory