File Info

Filename
.command.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/8aca4b595a3eb4d066f54768e12029/.command.out
Size
1.0 KB
Attempt
  AIH curated blacklist: matched 0 fusion rows (breakpoint_ID in qualified set)

================================================================================
ARRIBA FILTERING SUMMARY
================================================================================

Total fusions: 5
  Pass (FILTER=PASS): 0 (0.0%)
  Fail (FILTER=FAIL): 5 (100.0%)

Failure reasons (top 15):
  confidence_below_min(medium<high): 1
  confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 1
  confidence_below_min(low<high): 1
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 1

Breakdown by confidence:
  low: 0 pass, 3 fail (total: 3)
  medium: 0 pass, 2 fail (total: 2)
Arriba filter: 5 rows -> 0 PASS; wrote HeadNeckN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and HeadNeckN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: HeadNeckN_FFPE_L02_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt