NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (A673_FFPE_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_exp0011-e7be3c7a_b - Workflow Tracker

Runs
dev_rna_exp0..-e7be3c7a_b
Tasks
GATK4_MARKDUPLICATES (A673_FFPE_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: f4b9ee879557
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: A673_FFPE_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 97/a079c3
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/a079c3293495e6b0304c312fc5c9ff
Native ID: nf-97a079c3293495e6b0304c312fc5c9ff-727c5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 96.3 GB / 148.0 GB
Process I/O (rchar / wchar): 57.2 GB / 36.9 GB
Disk I/O (read / write): - / 36.9 GB
Host: i-0994e327398604ed5 ( on-demand)

Runtime

Submitted: May 28, 2026 3:34:48 PM
Completed: May 28, 2026 4:26:45 PM
Total Duration: 51m 56s

Phases

Queue: 13s
Execution: 49m 19s
Stage/Unstage: 2m 24s

Attempt 1

Execution

Status: failed
Hash: f0/9177cd
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/9177cdaab7118d0236070d906d5f06
Native ID: nf-f09177cdaab7118d0236070d906d5f06-5096b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-014cd0c643599a038 ( spot)

Runtime

Submitted: May 28, 2026 3:21:44 PM
Completed: May 28, 2026 3:34:48 PM
Total Duration: 13m 4s

Phases

Queue: 13m 4s
Execution: -
Stage/Unstage: -