Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
1,RT4_FFPE_RNA_0001_B23LG7FLT4_1,TCACCGTGGT-TCGCTCTGCT,97093326,95063366,2029960,0,0.0237,0.9791,0.0209,0.0000
1,786-O_FFPE_RNA_0001_B23LG7FLT4_1,CAACTACCGC-ATGCTGCAGG,117708491,115297005,2411486,0,0.0288,0.9795,0.0205,0.0000
1,A549_FFPE_01_RNA_0001_B23LG7FLT4_1,ACTCGTCCAG-TGGTCCTCGT,993400,971171,22229,0,0.0002,0.9776,0.0224,0.0000
1,U118MG_FFPE_RNA_0001_B23LG7FLT4_1,TCCGGAGAAC-ATTCCTCTGG,138003884,135101071,2902813,0,0.0337,0.9790,0.0210,0.0000
1,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1,TTGTGAGAAG-TTCACTGGCT,163978631,160754883,3223748,0,0.0401,0.9803,0.0197,0.0000
1,BT-20_FFPE_RNA_0001_B23LG7FLT4_1,CCGAAGGTTC-TCTATCTGAC,22469762,22052506,417256,0,0.0055,0.9814,0.0186,0.0000
1,22Rv1_FFPE_RNA_0001_B23LG7FLT4_1,ATACACACCT-AGTGTGATAG,4455189,4342596,112593,0,0.0011,0.9747,0.0253,0.0000
1,Hs746T_FFPE_RNA_0001_B23LG7FLT4_1,AGCCTCTGCT-TTCGCCTTAG,137312087,132271682,5040405,0,0.0336,0.9633,0.0367,0.0000
1,RT4_FFPE_RNA_0001_B23LG7FLT4_2,CGGATCATTA-CCGTAACCTT,93942475,91344260,2598215,0,0.0230,0.9723,0.0277,0.0000
1,786-O_FFPE_RNA_0001_B23LG7FLT4_2,CTCTCTCTAG-ACTTGATTGG,129783474,126565333,3218141,0,0.0317,0.9752,0.0248,0.0000
1,A549_FFPE_01_RNA_0001_B23LG7FLT4_2,AAGGCTCCAT-TGAAGATGGA,746698,731650,15048,0,0.0002,0.9798,0.0202,0.0000
1,Hs746T_FFPE_RNA_0001_23LG7FLT4_1,CTTGTTACTG-AATTCGGTGG,153846114,150821203,3024911,0,0.0376,0.9803,0.0197,0.0000
1,U118MG_FFPE_RNA_0001_B23LG7FLT4_2,GATAGATCAG-CGTACGCCAT,144986424,141575643,3410781,0,0.0354,0.9765,0.0235,0.0000
1,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2,GCAGAAGTCT-CTGCGTCGAA,147671452,144407964,3263488,0,0.0361,0.9779,0.0221,0.0000
1,BT-20_FFPE_RNA_0001_B23LG7FLT4_2,TATACGATGC-CTCCTAATCT,22565535,22026220,539315,0,0.0055,0.9761,0.0239,0.0000
1,22Rv1_FFPE_RNA_0001_B23LG7FLT4_2,AACGCTCTGA-GAGTAACGTG,3952661,3856700,95961,0,0.0010,0.9757,0.0243,0.0000
1,Hs746T_FFPE_RNA_0001_B23LG7FLT4_2,GATTGGCGAT-CTGTCTCATT,121277646,118241444,3036202,0,0.0296,0.9750,0.0250,0.0000
1,RT4_FFPE_RNA_0001_B23LG7FLT4_3,CAAGACGGAC-GTACTCCGTC,79219932,77568795,1651137,0,0.0194,0.9792,0.0208,0.0000
1,786-O_FFPE_RNA_0001_B23LG7FLT4_3,CCACTCAACG-CCTGTCTAGA,122135601,119363122,2772479,0,0.0299,0.9773,0.0227,0.0000
1,A549_FFPE_01_RNA_0001_B23LG7FLT4_3,AGCCACTCGT-CCAAGAGGAT,1156592,1103284,53308,0,0.0003,0.9539,0.0461,0.0000
1,U118MG_FFPE_RNA_0001_B23LG7FLT4_3,GCGAAGAATT-TCACGGATGA,144602984,141070723,3532261,0,0.0354,0.9756,0.0244,0.0000
1,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3,TGTCGGTGCT-AGTTCTTCCG,141285949,138401917,2884032,0,0.0345,0.9796,0.0204,0.0000
1,BT-20_FFPE_RNA_0001_B23LG7FLT4_3,TCTACAGCTA-AATGGAAGAC,21181551,20663141,518410,0,0.0052,0.9755,0.0245,0.0000
1,22Rv1_FFPE_RNA_0001_B23LG7FLT4_3,CAACCATGAT-ATAAGGTGAC,4438587,4340951,97636,0,0.0011,0.9780,0.0220,0.0000
1,KG1_FFPE_01_RNA_0003_B23LG7FLT4_1,CGCACATTAC-TGGAACGTAG,97851555,95920897,1930658,0,0.0239,0.9803,0.0197,0.0000
1,MCF7_FFPE_RNA_0001_B23LG7FLT4_1,ATCTAACCTG-CCTGTGGTTC,111060067,108526327,2533740,0,0.0272,0.9772,0.0228,0.0000
1,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1,GCGACAATAT-ATTCGTACGG,155006911,151651159,3355752,0,0.0379,0.9784,0.0216,0.0000
1,SW780_FFPE_RNA_0001_B23LG7FLT4_1,TTGCCGTATC-ACATTAGCGG,92513063,90484962,2028101,0,0.0226,0.9781,0.0219,0.0000
1,A673_FFPE_RNA_0001_B23LG7FLT4_1,GATCCACTTA-GTGTTCTGTT,119228043,116555775,2672268,0,0.0291,0.9776,0.0224,0.0000
1,ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1,TCCGAGATGC-TGTCACCTTA,4707692,4504498,203194,0,0.0012,0.9568,0.0432,0.0000
1,SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1,ATAGAGTTCG-GCATAACGGC,2536357,2467509,68848,0,0.0006,0.9729,0.0271,0.0000
1,FFPE_V4_0001_RNA_0001_B23LG7FLT4_1,GCATTCCTTC-GAGCCTGCTT,70409954,52263871,18146083,0,0.0172,0.7423,0.2577,0.0000
1,KG1_FFPE_01_RNA_0003_B23LG7FLT4_2,AATCGTGCGG-GTTCAGTAGA,112234239,109962156,2272083,0,0.0274,0.9798,0.0202,0.0000
1,MCF7_FFPE_RNA_0001_B23LG7FLT4_2,TACCGGAGCA-CTTAGCAGGC,97833841,95811146,2022695,0,0.0239,0.9793,0.0207,0.0000
1,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2,AGCACCAGTC-CTCGTGTAGC,125692739,122738960,2953779,0,0.0307,0.9765,0.0235,0.0000
1,SW780_FFPE_RNA_0001_B23LG7FLT4_2,TACCTAGACT-GCATTCGAAT,96190332,92953281,3237051,0,0.0235,0.9663,0.0337,0.0000
1,A673_FFPE_RNA_0001_B23LG7FLT4_2,CAGACTGCAG-ACCGGCCTTA,101766356,94668056,7098300,0,0.0249,0.9302,0.0698,0.0000
1,ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1,GTTAGTGCCT-CTGCATAGCA,3808200,3724266,83934,0,0.0009,0.9780,0.0220,0.0000
1,EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1,CGCAATAAGA-CCTACAGCGT,4385111,4259924,125187,0,0.0011,0.9715,0.0285,0.0000
1,FFPE_HD789_01_RNA_0002_B23LG7FLT4_1,TCGGTCTGTT-TGGTTGGTAC,96028148,94182994,1845154,0,0.0235,0.9808,0.0192,0.0000
1,KG1_FFPE_01_RNA_0003_B23LG7FLT4_3,CTAGACGAGC-GAGGATGGAT,129025307,126185660,2839647,0,0.0315,0.9780,0.0220,0.0000
1,MCF7_FFPE_RNA_0001_B23LG7FLT4_3,GTAATACTCG-CTCACGAATC,112192335,106129101,6063234,0,0.0274,0.9460,0.0540,0.0000
1,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3,GATTCTTAGC-TGCTAGCGGT,117236169,114996907,2239262,0,0.0287,0.9809,0.0191,0.0000
1,SW780_FFPE_RNA_0001_B23LG7FLT4_3,TGTGATCGCG-AGACGAGTCT,90952481,88280025,2672456,0,0.0222,0.9706,0.0294,0.0000
1,A673_FFPE_RNA_0001_B23LG7FLT4_3,ATCGAGAGAC-TGGAAGCAGA,78858859,77087895,1770964,0,0.0193,0.9775,0.0225,0.0000
1,BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1,CTGAACGTAT-GCCAATACAT,3818461,3739161,79300,0,0.0009,0.9792,0.0208,0.0000
1,OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1,CACTAGACTT-TGTGGATTAG,1628223,1593024,35199,0,0.0004,0.9784,0.0216,0.0000
1,NTC_0001_0001_B23LG7FLT4_1,CGTCGCCTAT-TATCTTCTCG,218630,210062,8568,0,0.0001,0.9608,0.0392,0.0000
1,Undetermined,,250334217,250334217,0,0,0.0612,1.0000,0.0000,0.0000