Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
3,RT4_FFPE_RNA_0001_B23LG7FLT4_1,TCACCGTGGT-TCGCTCTGCT,97059236,94067667,2991569,0,0.0237,0.9692,0.0308,0.0000
3,786-O_FFPE_RNA_0001_B23LG7FLT4_1,CAACTACCGC-ATGCTGCAGG,117198631,113581378,3617253,0,0.0287,0.9691,0.0309,0.0000
3,A549_FFPE_01_RNA_0001_B23LG7FLT4_1,ACTCGTCCAG-TGGTCCTCGT,1010408,977712,32696,0,0.0002,0.9676,0.0324,0.0000
3,U118MG_FFPE_RNA_0001_B23LG7FLT4_1,TCCGGAGAAC-ATTCCTCTGG,137461107,133175409,4285698,0,0.0336,0.9688,0.0312,0.0000
3,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1,TTGTGAGAAG-TTCACTGGCT,164796874,159957832,4839042,0,0.0403,0.9706,0.0294,0.0000
3,BT-20_FFPE_RNA_0001_B23LG7FLT4_1,CCGAAGGTTC-TCTATCTGAC,22445577,21789388,656189,0,0.0055,0.9708,0.0292,0.0000
3,22Rv1_FFPE_RNA_0001_B23LG7FLT4_1,ATACACACCT-AGTGTGATAG,4443431,4283386,160045,0,0.0011,0.9640,0.0360,0.0000
3,Hs746T_FFPE_RNA_0001_B23LG7FLT4_1,AGCCTCTGCT-TTCGCCTTAG,139185217,132811352,6373865,0,0.0340,0.9542,0.0458,0.0000
3,RT4_FFPE_RNA_0001_B23LG7FLT4_2,CGGATCATTA-CCGTAACCTT,93991104,90457132,3533972,0,0.0230,0.9624,0.0376,0.0000
3,786-O_FFPE_RNA_0001_B23LG7FLT4_2,CTCTCTCTAG-ACTTGATTGG,129961851,125421415,4540436,0,0.0318,0.9651,0.0349,0.0000
3,A549_FFPE_01_RNA_0001_B23LG7FLT4_2,AAGGCTCCAT-TGAAGATGGA,748684,725776,22908,0,0.0002,0.9694,0.0306,0.0000
3,Hs746T_FFPE_RNA_0001_23LG7FLT4_1,CTTGTTACTG-AATTCGGTGG,154605965,150065026,4540939,0,0.0378,0.9706,0.0294,0.0000
3,U118MG_FFPE_RNA_0001_B23LG7FLT4_2,GATAGATCAG-CGTACGCCAT,144734882,139938894,4795988,0,0.0354,0.9669,0.0331,0.0000
3,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2,GCAGAAGTCT-CTGCGTCGAA,148813494,143993688,4819806,0,0.0364,0.9676,0.0324,0.0000
3,BT-20_FFPE_RNA_0001_B23LG7FLT4_2,TATACGATGC-CTCCTAATCT,22534200,21749348,784852,0,0.0055,0.9652,0.0348,0.0000
3,22Rv1_FFPE_RNA_0001_B23LG7FLT4_2,AACGCTCTGA-GAGTAACGTG,3961106,3824224,136882,0,0.0010,0.9654,0.0346,0.0000
3,Hs746T_FFPE_RNA_0001_B23LG7FLT4_2,GATTGGCGAT-CTGTCTCATT,120785021,116535518,4249503,0,0.0295,0.9648,0.0352,0.0000
3,RT4_FFPE_RNA_0001_B23LG7FLT4_3,CAAGACGGAC-GTACTCCGTC,79216051,76729666,2486385,0,0.0194,0.9686,0.0314,0.0000
3,786-O_FFPE_RNA_0001_B23LG7FLT4_3,CCACTCAACG-CCTGTCTAGA,121700662,117694802,4005860,0,0.0298,0.9671,0.0329,0.0000
3,A549_FFPE_01_RNA_0001_B23LG7FLT4_3,AGCCACTCGT-CCAAGAGGAT,1165552,1101901,63651,0,0.0003,0.9454,0.0546,0.0000
3,U118MG_FFPE_RNA_0001_B23LG7FLT4_3,GCGAAGAATT-TCACGGATGA,143861479,138879456,4982023,0,0.0352,0.9654,0.0346,0.0000
3,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3,TGTCGGTGCT-AGTTCTTCCG,141469850,137283270,4186580,0,0.0346,0.9704,0.0296,0.0000
3,BT-20_FFPE_RNA_0001_B23LG7FLT4_3,TCTACAGCTA-AATGGAAGAC,21116868,20371659,745209,0,0.0052,0.9647,0.0353,0.0000
3,22Rv1_FFPE_RNA_0001_B23LG7FLT4_3,CAACCATGAT-ATAAGGTGAC,4437383,4294450,142933,0,0.0011,0.9678,0.0322,0.0000
3,KG1_FFPE_01_RNA_0003_B23LG7FLT4_1,CGCACATTAC-TGGAACGTAG,97046843,94141584,2905259,0,0.0237,0.9701,0.0299,0.0000
3,MCF7_FFPE_RNA_0001_B23LG7FLT4_1,ATCTAACCTG-CCTGTGGTTC,110593214,106891387,3701827,0,0.0271,0.9665,0.0335,0.0000
3,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1,GCGACAATAT-ATTCGTACGG,154178542,149226768,4951774,0,0.0377,0.9679,0.0321,0.0000
3,SW780_FFPE_RNA_0001_B23LG7FLT4_1,TTGCCGTATC-ACATTAGCGG,91957312,88981985,2975327,0,0.0225,0.9676,0.0324,0.0000
3,A673_FFPE_RNA_0001_B23LG7FLT4_1,GATCCACTTA-GTGTTCTGTT,118720013,114792299,3927714,0,0.0290,0.9669,0.0331,0.0000
3,ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1,TCCGAGATGC-TGTCACCTTA,4706616,4455158,251458,0,0.0012,0.9466,0.0534,0.0000
3,SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1,ATAGAGTTCG-GCATAACGGC,2553761,2459061,94700,0,0.0006,0.9629,0.0371,0.0000
3,FFPE_V4_0001_RNA_0001_B23LG7FLT4_1,GCATTCCTTC-GAGCCTGCTT,70368438,51437534,18930904,0,0.0172,0.7310,0.2690,0.0000
3,KG1_FFPE_01_RNA_0003_B23LG7FLT4_2,AATCGTGCGG-GTTCAGTAGA,111977058,108608190,3368868,0,0.0274,0.9699,0.0301,0.0000
3,MCF7_FFPE_RNA_0001_B23LG7FLT4_2,TACCGGAGCA-CTTAGCAGGC,97124195,94139352,2984843,0,0.0238,0.9693,0.0307,0.0000
3,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2,AGCACCAGTC-CTCGTGTAGC,125363302,121165278,4198024,0,0.0307,0.9665,0.0335,0.0000
3,SW780_FFPE_RNA_0001_B23LG7FLT4_2,TACCTAGACT-GCATTCGAAT,95164682,90947346,4217336,0,0.0233,0.9557,0.0443,0.0000
3,A673_FFPE_RNA_0001_B23LG7FLT4_2,CAGACTGCAG-ACCGGCCTTA,101599883,93370073,8229810,0,0.0249,0.9190,0.0810,0.0000
3,ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1,GTTAGTGCCT-CTGCATAGCA,3808117,3684011,124106,0,0.0009,0.9674,0.0326,0.0000
3,EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1,CGCAATAAGA-CCTACAGCGT,4392903,4228628,164275,0,0.0011,0.9626,0.0374,0.0000
3,FFPE_HD789_01_RNA_0002_B23LG7FLT4_1,TCGGTCTGTT-TGGTTGGTAC,95534817,92753866,2780951,0,0.0234,0.9709,0.0291,0.0000
3,KG1_FFPE_01_RNA_0003_B23LG7FLT4_3,CTAGACGAGC-GAGGATGGAT,128379561,124177778,4201783,0,0.0314,0.9673,0.0327,0.0000
3,MCF7_FFPE_RNA_0001_B23LG7FLT4_3,GTAATACTCG-CTCACGAATC,112001512,104755576,7245936,0,0.0274,0.9353,0.0647,0.0000
3,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3,GATTCTTAGC-TGCTAGCGGT,116870376,113478605,3391771,0,0.0286,0.9710,0.0290,0.0000
3,SW780_FFPE_RNA_0001_B23LG7FLT4_3,TGTGATCGCG-AGACGAGTCT,91266660,87725492,3541168,0,0.0223,0.9612,0.0388,0.0000
3,A673_FFPE_RNA_0001_B23LG7FLT4_3,ATCGAGAGAC-TGGAAGCAGA,78279487,75736375,2543112,0,0.0191,0.9675,0.0325,0.0000
3,BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1,CTGAACGTAT-GCCAATACAT,3813054,3691544,121510,0,0.0009,0.9681,0.0319,0.0000
3,OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1,CACTAGACTT-TGTGGATTAG,1632708,1580291,52417,0,0.0004,0.9679,0.0321,0.0000
3,NTC_0001_0001_B23LG7FLT4_1,CGTCGCCTAT-TATCTTCTCG,221304,210552,10752,0,0.0001,0.9514,0.0486,0.0000
3,Undetermined,,253916096,253916096,0,0,0.0621,1.0000,0.0000,0.0000