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Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Demultiplex_Stats.csv
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5.7 KB
Workflow Run
dev_rna_exp0008_exp0011_73d51683
Published
Jun 07, 2026 11:34 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
5 LungN_FFPE_L01_RNA_01_B23LG7FLT4_1 CAACCATACA-ACCGGTTATA 206930008 201428173 5501835 0 0.0505 0.9734 0.0266 0.0000
5 LungN_FFPE_L02_RNA_01_B23LG7FLT4_1 GTAGGCCGTT-GCCACTGTCT 45356955 44391028 965927 0 0.0111 0.9787 0.0213 0.0000
5 LungN_FFPE_L03_RNA_01_B23LG7FLT4_1 CGGATTGATC-AGTCACAACA 154918359 151752143 3166216 0 0.0378 0.9796 0.0204 0.0000
5 BreastNB_FFPE_L01_RNA_01_B23LG7FLT4_1 ACTGGCAAGA-TGTTGTCCAT 13171110 12960227 210883 0 0.0032 0.9840 0.0160 0.0000
5 BreastNB_FFPE_L02_RNA_01_B23LG7FLT4_1 ACAAGAACCT-CGATACTGAA 14094856 13791211 303645 0 0.0034 0.9785 0.0215 0.0000
5 BreastNB_FFPE_L03_RNA_01_B23LG7FLT4_1 AGAGTATGTG-AGATGGCTTC 20218873 19845938 372935 0 0.0049 0.9816 0.0184 0.0000
5 ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2 ACTTAGATCG-CGGAATTCTT 68249422 65467808 2781614 0 0.0167 0.9592 0.0408 0.0000
5 ColoN_FFPE_L06_RNA_01_B23LG7FLT4_2 GATCAACAAG-AAGCACTGTC 33022143 32349950 672193 0 0.0081 0.9796 0.0204 0.0000
5 BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_2 ACCTTCGGAC-GACCGTAGAT 4136534 4058581 77953 0 0.0010 0.9812 0.0188 0.0000
5 SkinN_FFPE_L01_RNA_01_B23LG7FLT4_2 TATCATGTCG-TAATCTGCAC 28850761 28371335 479426 0 0.0070 0.9834 0.0166 0.0000
5 EndoN_FFPE_L02_RNA_01_B23LG7FLT4_2 CGTCTAGTAA-TTAATCCAGC 22226421 21879826 346595 0 0.0054 0.9844 0.0156 0.0000
5 OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_2 TCTTAGGTGG-GATCACTGGT 49028313 48251976 776337 0 0.0120 0.9842 0.0158 0.0000
5 HeadNeckN_FFPE_L03_RNA_01_B23LG7FLT4_1 TCGACGTTGG-GATAAGTGTG 18418529 17606516 812013 0 0.0045 0.9559 0.0441 0.0000
5 HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1 AAGAGTACGA-GCAAGGACGT 139862207 137286832 2575375 0 0.0341 0.9816 0.0184 0.0000
5 ColoN_FFPE_L02_RNA_01_B23LG7FLT4_1 CACGAGAAGT-GTCTGCGTAG 10081179 9788015 293164 0 0.0025 0.9709 0.0291 0.0000
5 ColoN_FFPE_L07_RNA_01_B23LG7FLT4_1 GACAATTAGC-CCGGTCATGA 11668060 11430842 237218 0 0.0028 0.9797 0.0203 0.0000
5 BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1 TTCTACCGGC-TACTCGTAAG 10457798 10286980 170818 0 0.0026 0.9837 0.0163 0.0000
5 SkinN_FFPE_L02_RNA_01_B23LG7FLT4_1 GTGAGAGTAT-ATCTGTGAGG 20846182 20452880 393302 0 0.0051 0.9811 0.0189 0.0000
5 SkinN_FFPE_L07_RNA_01_B23LG7FLT4_1 CTGGAGAATA-TCCATACAAC 55480701 54216315 1264386 0 0.0135 0.9772 0.0228 0.0000
5 EndoN_FFPE_L03_RNA_01_B23LG7FLT4_1 TGACAAGAGG-AATCTGTTGG 28298491 27804285 494206 0 0.0069 0.9825 0.0175 0.0000
5 EndoN_FFPE_L08_RNA_01_B23LG7FLT4_1 TGTTCGCTCT-ACTTGCGTGT 10440789 10226629 214160 0 0.0025 0.9795 0.0205 0.0000
5 OvarianN_FFPE_L04_RNA_01_B23LG7FLT4_1 AGGTATTCGG-AGATGTGCGC 125530741 120797944 4732797 0 0.0307 0.9623 0.0377 0.0000
5 HeadNeckN_FFPE_L04_RNA_01_B23LG7FLT4_1 ACGGCCTACA-TCTCACTCTA 14629492 14381580 247912 0 0.0036 0.9831 0.0169 0.0000
5 HeadNeckN_FFPE_L09_RNA_01_B23LG7FLT4_1 CACGTAAGAG-TCAATCCGCG 36947345 34163016 2784329 0 0.0090 0.9246 0.0754 0.0000
5 ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1 AATCGAACTC-ACGAACCTTA 4764995 4660014 104981 0 0.0012 0.9780 0.0220 0.0000
5 ColoN_FFPE_L08_RNA_01_B23LG7FLT4_1 AGGCTGGAGA-CAACTGTCAT 28991010 28454424 536586 0 0.0071 0.9815 0.0185 0.0000
5 BreastNP_FFPE_L04_RNA_01_B23LG7FLT4_1 TAAGCCACGC-TTACGAACGA 9607190 9459455 147735 0 0.0023 0.9846 0.0154 0.0000
5 SkinN_FFPE_L08_RNA_01_B23LG7FLT4_1 TCAATCAGAG-GACTCTGGTT 18575831 18050133 525698 0 0.0045 0.9717 0.0283 0.0000
5 SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1 AACATAAGGC-GTTAGCTTAG 92306982 90521446 1785536 0 0.0225 0.9807 0.0193 0.0000
5 SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1 TTGCAATGCG-CGAGACTTCA 121654812 118870293 2784519 0 0.0297 0.9771 0.0229 0.0000
5 EndoN_FFPE_L01_RNA_01_B23LG7FLT4_1 AACCGGCCTT-TGTTCAGATC 160076815 156986801 3090014 0 0.0391 0.9807 0.0193 0.0000
5 EndoN_FFPE_L04_RNA_01_B23LG7FLT4_1 CATTATCGCT-CGAGTTGCTT 128082340 125890500 2191840 0 0.0313 0.9829 0.0171 0.0000
5 EndoN_FFPE_L05_RNA_01_B23LG7FLT4_1 CATTGAGCTA-ACTTCACATC 7807646 7651145 156501 0 0.0019 0.9800 0.0200 0.0000
5 EndoN_FFPE_L06_RNA_01_B23LG7FLT4_1 CTTCGGAATC-CGTCGGTAAG 55566391 54183775 1382616 0 0.0136 0.9751 0.0249 0.0000
5 EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1 AACCACACTA-CCTCTGCTGA 174193977 170897041 3296936 0 0.0425 0.9811 0.0189 0.0000
5 OvarianNP_FFPE_L01_RNA_01_B23LG7FLT4_1 GTACAGCGGA-CAATCTGTGT 4170347 4105502 64845 0 0.0010 0.9845 0.0155 0.0000
5 OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1 ACTTCAACAG-GCGTGAGCAT 4440911 4349346 91565 0 0.0011 0.9794 0.0206 0.0000
5 OvarianNP_FFPE_L05_RNA_01_B23LG7FLT4_1 TGGACAATAG-GAGTCCTGTG 12106327 11843112 263215 0 0.0030 0.9783 0.0217 0.0000
5 HeadNeckN_FFPE_L01_RNA_01_B23LG7FLT4_1 TCACACGGAT-CTTCTGATCG 33360973 32892370 468603 0 0.0081 0.9860 0.0140 0.0000
5 HeadNeckN_FFPE_L02_RNA_01_B23LG7FLT4_1 AGGATACGGT-AACCACGTCA 26704458 26219325 485133 0 0.0065 0.9818 0.0182 0.0000
5 HeadNeckN_FFPE_L05_RNA_01_B23LG7FLT4_1 GCTACAGGTC-TTATGCAGGA 5834256 5704133 130123 0 0.0014 0.9777 0.0223 0.0000
5 HeadNeckN_FFPE_L06_RNA_01_B23LG7FLT4_1 GCCAAGTAAC-TGCGTGATGA 18307379 17799506 507873 0 0.0045 0.9723 0.0277 0.0000
5 OvarianND_FFPE_L01_RNA_01_B23LG7FLT4_1 TTGTGAAGGC-TCGTCAGTAC 239887349 235757618 4129731 0 0.0586 0.9828 0.0172 0.0000
5 OvarianND_FFPE_L02_RNA_01_B23LG7FLT4_1 GTCGACTCCT-TGCCGTTAGC 206673443 200828148 5845295 0 0.0505 0.9717 0.0283 0.0000
5 OvarianND_FFPE_L03_RNA_01_B23LG7FLT4_1 CTGAGCTTGT-CTTCTTGCGT 247395336 243965995 3429341 0 0.0604 0.9861 0.0139 0.0000
5 FFPE_HD789_01_RNA_0004_B23LG7FLT4_1 CCTCTGTCAT-CGTATCGATT 601407368 593074455 8332913 0 0.1468 0.9861 0.0139 0.0000
5 FFPE_V4_0001_RNA_0001_B23LG7FLT4_2 GCAGATGTAA-TACACGCCTC 482113463 472019503 10093960 0 0.1177 0.9791 0.0209 0.0000
5 NTC_0001_0001_B23LG7FLT4_2 CTCATCATCT-TAAGCCTCTA 293635 286058 7577 0 0.0001 0.9742 0.0258 0.0000
5 Undetermined 268356261 268356261 0 0 0.0655 1.0000 0.0000 0.0000
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