Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
4,RT4_FFPE_RNA_0001_B23LG7FLT4_1,TCACCGTGGT-TCGCTCTGCT,96305283,94504725,1800558,0,0.0237,0.9813,0.0187,0.0000
4,786-O_FFPE_RNA_0001_B23LG7FLT4_1,CAACTACCGC-ATGCTGCAGG,116076665,113908379,2168286,0,0.0286,0.9813,0.0187,0.0000
4,A549_FFPE_01_RNA_0001_B23LG7FLT4_1,ACTCGTCCAG-TGGTCCTCGT,1014518,993193,21325,0,0.0002,0.9790,0.0210,0.0000
4,U118MG_FFPE_RNA_0001_B23LG7FLT4_1,TCCGGAGAAC-ATTCCTCTGG,135718759,133111850,2606909,0,0.0334,0.9808,0.0192,0.0000
4,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1,TTGTGAGAAG-TTCACTGGCT,164261194,161379564,2881630,0,0.0405,0.9825,0.0175,0.0000
4,BT-20_FFPE_RNA_0001_B23LG7FLT4_1,CCGAAGGTTC-TCTATCTGAC,22256655,21885529,371126,0,0.0055,0.9833,0.0167,0.0000
4,22Rv1_FFPE_RNA_0001_B23LG7FLT4_1,ATACACACCT-AGTGTGATAG,4428021,4320970,107051,0,0.0011,0.9758,0.0242,0.0000
4,Hs746T_FFPE_RNA_0001_B23LG7FLT4_1,AGCCTCTGCT-TTCGCCTTAG,139707178,134761533,4945645,0,0.0344,0.9646,0.0354,0.0000
4,RT4_FFPE_RNA_0001_B23LG7FLT4_2,CGGATCATTA-CCGTAACCTT,93714131,91295874,2418257,0,0.0231,0.9742,0.0258,0.0000
4,786-O_FFPE_RNA_0001_B23LG7FLT4_2,CTCTCTCTAG-ACTTGATTGG,129895756,126875647,3020109,0,0.0320,0.9767,0.0233,0.0000
4,A549_FFPE_01_RNA_0001_B23LG7FLT4_2,AAGGCTCCAT-TGAAGATGGA,748677,734725,13952,0,0.0002,0.9814,0.0186,0.0000
4,Hs746T_FFPE_RNA_0001_23LG7FLT4_1,CTTGTTACTG-AATTCGGTGG,154563280,151835083,2728197,0,0.0381,0.9823,0.0177,0.0000
4,U118MG_FFPE_RNA_0001_B23LG7FLT4_2,GATAGATCAG-CGTACGCCAT,143619493,140534332,3085161,0,0.0354,0.9785,0.0215,0.0000
4,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2,GCAGAAGTCT-CTGCGTCGAA,148615762,145625056,2990706,0,0.0366,0.9799,0.0201,0.0000
4,BT-20_FFPE_RNA_0001_B23LG7FLT4_2,TATACGATGC-CTCCTAATCT,22408280,21901729,506551,0,0.0055,0.9774,0.0226,0.0000
4,22Rv1_FFPE_RNA_0001_B23LG7FLT4_2,AACGCTCTGA-GAGTAACGTG,3954514,3865456,89058,0,0.0010,0.9775,0.0225,0.0000
4,Hs746T_FFPE_RNA_0001_B23LG7FLT4_2,GATTGGCGAT-CTGTCTCATT,119860880,117046522,2814358,0,0.0295,0.9765,0.0235,0.0000
4,RT4_FFPE_RNA_0001_B23LG7FLT4_3,CAAGACGGAC-GTACTCCGTC,77940353,76441670,1498683,0,0.0192,0.9808,0.0192,0.0000
4,786-O_FFPE_RNA_0001_B23LG7FLT4_3,CCACTCAACG-CCTGTCTAGA,121154310,118586258,2568052,0,0.0298,0.9788,0.0212,0.0000
4,A549_FFPE_01_RNA_0001_B23LG7FLT4_3,AGCCACTCGT-CCAAGAGGAT,1160767,1108260,52507,0,0.0003,0.9548,0.0452,0.0000
4,U118MG_FFPE_RNA_0001_B23LG7FLT4_3,GCGAAGAATT-TCACGGATGA,142654877,139406866,3248011,0,0.0351,0.9772,0.0228,0.0000
4,SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3,TGTCGGTGCT-AGTTCTTCCG,140602618,138033099,2569519,0,0.0346,0.9817,0.0183,0.0000
4,BT-20_FFPE_RNA_0001_B23LG7FLT4_3,TCTACAGCTA-AATGGAAGAC,21078299,20587098,491201,0,0.0052,0.9767,0.0233,0.0000
4,22Rv1_FFPE_RNA_0001_B23LG7FLT4_3,CAACCATGAT-ATAAGGTGAC,4409954,4320169,89785,0,0.0011,0.9796,0.0204,0.0000
4,KG1_FFPE_01_RNA_0003_B23LG7FLT4_1,CGCACATTAC-TGGAACGTAG,96079530,94331471,1748059,0,0.0237,0.9818,0.0182,0.0000
4,MCF7_FFPE_RNA_0001_B23LG7FLT4_1,ATCTAACCTG-CCTGTGGTTC,110032579,107672894,2359685,0,0.0271,0.9786,0.0214,0.0000
4,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1,GCGACAATAT-ATTCGTACGG,154060235,151014821,3045414,0,0.0380,0.9802,0.0198,0.0000
4,SW780_FFPE_RNA_0001_B23LG7FLT4_1,TTGCCGTATC-ACATTAGCGG,91445544,89625015,1820529,0,0.0225,0.9801,0.0199,0.0000
4,A673_FFPE_RNA_0001_B23LG7FLT4_1,GATCCACTTA-GTGTTCTGTT,117717151,115287875,2429276,0,0.0290,0.9794,0.0206,0.0000
4,ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1,TCCGAGATGC-TGTCACCTTA,4662828,4462931,199897,0,0.0011,0.9571,0.0429,0.0000
4,SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1,ATAGAGTTCG-GCATAACGGC,2512635,2448844,63791,0,0.0006,0.9746,0.0254,0.0000
4,FFPE_V4_0001_RNA_0001_B23LG7FLT4_1,GCATTCCTTC-GAGCCTGCTT,69620090,51295585,18324505,0,0.0172,0.7368,0.2632,0.0000
4,KG1_FFPE_01_RNA_0003_B23LG7FLT4_2,AATCGTGCGG-GTTCAGTAGA,111146754,109075064,2071690,0,0.0274,0.9814,0.0186,0.0000
4,MCF7_FFPE_RNA_0001_B23LG7FLT4_2,TACCGGAGCA-CTTAGCAGGC,95587510,93771244,1816266,0,0.0235,0.9810,0.0190,0.0000
4,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2,AGCACCAGTC-CTCGTGTAGC,124319055,121563981,2755074,0,0.0306,0.9778,0.0222,0.0000
4,SW780_FFPE_RNA_0001_B23LG7FLT4_2,TACCTAGACT-GCATTCGAAT,94137603,91096873,3040730,0,0.0232,0.9677,0.0323,0.0000
4,A673_FFPE_RNA_0001_B23LG7FLT4_2,CAGACTGCAG-ACCGGCCTTA,100200614,93323690,6876924,0,0.0247,0.9314,0.0686,0.0000
4,ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1,GTTAGTGCCT-CTGCATAGCA,3790765,3714437,76328,0,0.0009,0.9799,0.0201,0.0000
4,EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1,CGCAATAAGA-CCTACAGCGT,4347318,4231968,115350,0,0.0011,0.9735,0.0265,0.0000
4,FFPE_HD789_01_RNA_0002_B23LG7FLT4_1,TCGGTCTGTT-TGGTTGGTAC,94624810,92986386,1638424,0,0.0233,0.9827,0.0173,0.0000
4,KG1_FFPE_01_RNA_0003_B23LG7FLT4_3,CTAGACGAGC-GAGGATGGAT,127196580,124608238,2588342,0,0.0313,0.9797,0.0203,0.0000
4,MCF7_FFPE_RNA_0001_B23LG7FLT4_3,GTAATACTCG-CTCACGAATC,111943349,105872536,6070813,0,0.0276,0.9458,0.0542,0.0000
4,NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3,GATTCTTAGC-TGCTAGCGGT,116692273,114711512,1980761,0,0.0287,0.9830,0.0170,0.0000
4,SW780_FFPE_RNA_0001_B23LG7FLT4_3,TGTGATCGCG-AGACGAGTCT,91231799,88757798,2474001,0,0.0225,0.9729,0.0271,0.0000
4,A673_FFPE_RNA_0001_B23LG7FLT4_3,ATCGAGAGAC-TGGAAGCAGA,77948319,76351722,1596597,0,0.0192,0.9795,0.0205,0.0000
4,BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1,CTGAACGTAT-GCCAATACAT,3779537,3706238,73299,0,0.0009,0.9806,0.0194,0.0000
4,OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1,CACTAGACTT-TGTGGATTAG,1631798,1599346,32452,0,0.0004,0.9801,0.0199,0.0000
4,NTC_0001_0001_B23LG7FLT4_1,CGTCGCCTAT-TATCTTCTCG,220386,211634,8752,0,0.0001,0.9603,0.0397,0.0000
4,Undetermined,,248089917,248089917,0,0,0.0611,1.0000,0.0000,0.0000