File Info
- Filename
- SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__73d51683--20260607-225254/agat/SkinN_FFPE_L04_RNA_01_B23LG7FLT4_1.tsv
- Size
- 7.3 KB
- Workflow Run
- dev_rna_exp0008_exp0011_73d51683
- Published
- Jun 08, 2026 4:59 AM
Content
View in new tab| seq_id | source_tag | primary_tag | start | end | score | strand | frame | exon_id | exon_number | FI_gene_label | gene_id | gene_name | gene_type | havana_gene | havana_transcript | hgnc_id | ID | level | ont | orig_coord_info | Parent | tag | transcript_id | transcript_name | transcript_support_level | transcript_type |
| TLK2P1--AC110079.1 | HAVANA | gene | 1001 | 4192 | . | 1 | . | ENSE00002174619.1 | 1 | TLK2P1^ENSG00000226049.3 | TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3 | TLK2P1 | processed_pseudogene | OTTHUMG00000166422.1 | OTTHUMT00000389700.1 | HGNC:18048 | TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3 | 1 | PGO:0000004 | chr17,34036681,34039872,- | N/A | pseudo_consens, basic | TLK2P1--AC110079.1^ENST00000530992.1 | TLK2P1-201 | NA | processed_pseudogene |
| TLK2P1--AC110079.1 | HAVANA | RNA | 1001 | 4192 | . | 1 | . | ENSE00002174619.1 | 1 | TLK2P1^ENSG00000226049.3 | TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3 | TLK2P1 | processed_pseudogene | OTTHUMG00000166422.1 | OTTHUMT00000389700.1 | HGNC:18048 | TLK2P1--AC110079.1^ENST00000530992.1 | 1 | PGO:0000004 | chr17,34036681,34039872,- | TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3 | pseudo_consens, basic | TLK2P1--AC110079.1^ENST00000530992.1 | TLK2P1-201 | NA | processed_pseudogene |
| TLK2P1--AC110079.1 | HAVANA | exon | 1001 | 4192 | . | 1 | . | ENSE00002174619.1 | 1 | TLK2P1^ENSG00000226049.3 | TLK2P1--AC110079.1^TLK2P1^ENSG00000226049.3 | TLK2P1 | processed_pseudogene | OTTHUMG00000166422.1 | OTTHUMT00000389700.1 | HGNC:18048 | ENSE00002174619.1 | 1 | PGO:0000004 | chr17,34036681,34039872,- | TLK2P1--AC110079.1^ENST00000530992.1 | pseudo_consens, basic | TLK2P1--AC110079.1^ENST00000530992.1 | TLK2P1-201 | NA | processed_pseudogene |
| TLK2P1--AC110079.1 | HAVANA | gene | 7193 | 19707 | . | 1 | . | ENSE00002625896.1 | 1 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | 2 | N/A | chr4,118591773,118591895,+ | N/A | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | RNA | 7193 | 19707 | . | 1 | . | ENSE00002625896.1 | 1 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | TLK2P1--AC110079.1^ENST00000567913.2 | 2 | N/A | chr4,118591773,118591895,+ | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 7193 | 7315 | . | 1 | . | ENSE00002625896.1 | 1 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002625896.1 | 2 | N/A | chr4,118591773,118591895,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 8316 | 8426 | . | 1 | . | ENSE00002596351.1 | 2 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002596351.1 | 2 | N/A | chr4,118595912,118596022,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 9454 | 9585 | . | 1 | . | ENSE00002610340.1 | 3 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002610340.1 | 2 | N/A | chr4,118597094,118597225,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 10586 | 10821 | . | 1 | . | ENSE00002577833.1 | 4 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002577833.1 | 2 | N/A | chr4,118605584,118605819,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 11822 | 11886 | . | 1 | . | ENSE00002626280.1 | 5 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002626280.1 | 2 | N/A | chr4,118608658,118608722,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 12887 | 13010 | . | 1 | . | ENSE00002592220.1 | 6 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002592220.1 | 2 | N/A | chr4,118617996,118618119,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 14011 | 14075 | . | 1 | . | ENSE00002598762.1 | 7 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002598762.1 | 2 | N/A | chr4,118621463,118621527,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 15076 | 15266 | . | 1 | . | ENSE00002610045.1 | 8 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002610045.1 | 2 | N/A | chr4,118628036,118628226,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 16267 | 16324 | . | 1 | . | ENSE00002576587.1 | 9 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002576587.1 | 2 | N/A | chr4,118630289,118630346,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 16418 | 19707 | . | 1 | . | ENSE00002581022.2 | 10 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | ENSE00002581022.2 | 2 | N/A | chr4,118630440,118633729,+ | TLK2P1--AC110079.1^ENST00000567913.2 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | RNA | 8316 | 8453 | . | 1 | . | ENSE00002625896.1 | 1 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000364170.2 | N/A | TLK2P1--AC110079.1^ENST00000635213.1 | 2 | N/A | chr4,118591773,118591895,+ | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | dotter_confirmed, basic | TLK2P1--AC110079.1^ENST00000567913.2 | AC110079.1-201 | 5 | processed_transcript |
| TLK2P1--AC110079.1 | HAVANA | exon | 8316 | 8453 | . | 1 | . | ENSE00003785427.1 | 1 | AC110079.1^ENSG00000260404.3 | TLK2P1--AC110079.1^AC110079.1^ENSG00000260404.3 | AC110079.1 | transcribed_unprocessed_pseudogene | OTTHUMG00000161164.4 | OTTHUMT00000488452.1 | N/A | ENSE00003785427.1 | 2 | PGO:0000005, PGO:0000019 | chr4,118595912,118596049,+ | TLK2P1--AC110079.1^ENST00000635213.1 | basic | TLK2P1--AC110079.1^ENST00000635213.1 | AC110079.1-202 | NA | transcribed_unprocessed_pseudogene |
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