Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/bb5b02982805e0e09826c53364cbcc/KG1_FFPE_01_RNA_0003_B23LG7FLT4_2.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/affd8f2ac8ed8e0dd613af16af9a6c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/affd8f2ac8ed8e0dd613af16af9a6c/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  KG1_FFPE_01_RNA_0003_B23LG7FLT4_2: vaf_p90=1.000000 -> CLEAN

Output saved to: KG1_FFPE_01_RNA_0003_B23LG7FLT4_2.predictions.csv
Summary: 0/1 samples flagged as contaminated