.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (22Rv1_FFPE_RNA_0001_B23LG7FLT4_3)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/260f5b2aa6c69ac20f585735286277/.command.err
Size: 25.6 KB
Task: NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (22Rv1_FFPE_RNA_0001_B23LG7FLT4_3)
Attempt
Content

-ctat genome lib [/tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.vbIAxnqQin/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary
-sample contains 13874867 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir  -J /tmp/nxf.vbIAxnqQin/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction  -O /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.vbIAxnqQin/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction
-building interval tree based on /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=35294.12/min 
[20000], rate=36363.64/min 
[30000], rate=39130.43/min 
[40000], rate=42105.26/min 
[50000], rate=34090.91/min 
[60000], rate=31304.35/min 
[70000], rate=32061.07/min 
[80000], rate=32653.06/min 
[90000], rate=32926.83/min 
[100000], rate=33519.55/min 
[110000], rate=33333.33/min 
[120000], rate=31034.48/min 
[130000], rate=29545.45/min 
[140000], rate=28474.58/min 
[150000], rate=28125.00/min 
[160000], rate=28571.43/min 
[170000], rate=29651.16/min 
[180000], rate=30594.90/min 
[190000], rate=31404.96/min 
[200000], rate=30456.85/min 
[210000], rate=30361.45/min 
[220000], rate=30205.95/min 
[230000], rate=30196.94/min 
[240000], rate=30062.63/min 
[250000], rate=30549.90/min 
[260000], rate=30952.38/min 
[270000], rate=30508.47/min 
[280000], rate=30324.91/min 
[290000], rate=30472.85/min 
[300000], rate=30769.23/min 
[310000], rate=31051.75/min 
[320000], rate=31219.51/min 
[330000], rate=31132.08/min 
[340000], rate=31240.43/min 
[350000], rate=31531.53/min 
[360000], rate=31952.66/min 
[370000], rate=32267.44/min 
[380000], rate=32664.76/min 
[390000], rate=32865.17/min 
[400000], rate=33012.38/min 
[410000], rate=33109.02/min 
[420000], rate=33245.38/min 
[430000], rate=33506.49/min 
[440000], rate=33889.60/min -building interval tree based on /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=13043.48/min 
[20000], rate=13953.49/min 
[30000], rate=13533.83/min 
[40000], rate=13953.49/min 
[50000], rate=14705.88/min 
[60000], rate=15652.17/min 
[70000], rate=16867.47/min 
[80000], rate=18461.54/min 
[90000], rate=20074.35/min 
[100000], rate=21428.57/min 
[110000], rate=22525.60/min 
[120000], rate=23300.97/min 
[130000], rate=24148.61/min 
[140000], rate=24778.76/min 
[150000], rate=25936.60/min 
[160000], rate=26158.04/min 
[170000], rate=26701.57/min 
[180000], rate=27480.92/min 
[190000], rate=27872.86/min 
[200000], rate=28368.79/min 
[210000], rate=29166.67/min 
[220000], rate=29931.97/min 
[230000], rate=30530.97/min 
[240000], rate=31101.51/min 
[250000], rate=31380.75/min 
[260000], rate=31836.73/min 
[270000], rate=32079.21/min 
[280000], rate=31818.18/min 
[290000], rate=31751.82/min 
[300000], rate=31914.89/min 
[310000], rate=32179.93/min 
[320000], rate=32268.91/min 
[330000], rate=32352.94/min 
[340000], rate=32797.43/min 
[350000], rate=32558.14/min 
[360000], rate=31952.66/min 
[370000], rate=31669.04/min 
[380000], rate=31622.75/min 
[390000], rate=31793.48/min 
[400000], rate=32085.56/min 
[410000], rate=32198.95/min 
[420000], rate=32432.43/min 
[430000], rate=32658.23/min 
[440000], rate=32958.80/min -building interval tree based on /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=17142.86/min 
[20000], rate=21428.57/min 
[30000], rate=21951.22/min 
[40000], rate=24000.00/min 
[50000], rate=26315.79/min 
[60000], rate=28571.43/min 
[70000], rate=29577.46/min 
[80000], rate=30967.74/min 
[90000], rate=31952.66/min 
[100000], rate=31088.08/min 
[110000], rate=31132.08/min 
[120000], rate=31441.05/min 
[130000], rate=32098.77/min 
[140000], rate=32941.18/min 
[150000], rate=34615.38/min 
[160000], rate=34532.37/min 
[170000], rate=34343.43/min 
[180000], rate=34394.90/min 
[190000], rate=34969.33/min 
[200000], rate=34285.71/min 
[210000], rate=33070.87/min 
[220000], rate=32352.94/min 
[230000], rate=31797.24/min 
[240000], rate=31578.95/min 
[250000], rate=31380.75/min 
[260000], rate=31578.95/min 
[270000], rate=31764.71/min 
[280000], rate=30712.98/min 
[290000], rate=30472.85/min 
[300000], rate=30303.03/min 
[310000], rate=30293.16/min 
[320000], rate=30622.01/min 
[330000], rate=30745.34/min 
[340000], rate=30909.09/min 
[350000], rate=31157.27/min 
[360000], rate=31532.85/min 
[370000], rate=31942.45/min 
[380000], rate=31710.71/min 
[390000], rate=31536.39/min 
[400000], rate=31047.87/min 
[410000], rate=30904.52/min 
[420000], rate=30996.31/min 
[430000], rate=31046.93/min 
[440000], rate=31316.73/min -building interval tree based on /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=54545.45/min 
[20000], rate=48000.00/min 
[30000], rate=50000.00/min 
[40000], rate=47058.82/min 
[50000], rate=47619.05/min 
[60000], rate=45000.00/min 
[70000], rate=41584.16/min 
[80000], rate=41025.64/min 
[90000], rate=42187.50/min 
[100000], rate=41666.67/min 
[110000], rate=40243.90/min 
[120000], rate=42105.26/min 
[130000], rate=42622.95/min 
[140000], rate=42857.14/min 
[150000], rate=42654.03/min 
[160000], rate=43636.36/min 
[170000], rate=43776.82/min 
[180000], rate=41221.37/min 
[190000], rate=34756.10/min 
[200000], rate=31088.08/min 
[210000], rate=28571.43/min 
[220000], rate=27272.73/min 
[230000], rate=26900.58/min 
[240000], rate=26716.14/min 
[250000], rate=26642.98/min 
[260000], rate=26666.67/min 
[270000], rate=27000.00/min 
[280000], rate=27361.56/min 
[290000], rate=27707.01/min 
[300000], rate=27950.31/min 
[310000], rate=28224.58/min 
[320000], rate=28444.44/min 
[330000], rate=28695.65/min 
[340000], rate=29142.86/min 
[350000], rate=29577.46/min 
[360000], rate=29589.04/min 
[370000], rate=29442.97/min 
[380000], rate=29533.68/min 
[390000], rate=29695.43/min 
[400000], rate=29850.75/min 
[410000], rate=30110.16/min 
[420000], rate=30508.47/min 
[430000], rate=30898.20/min 
[440000], rate=30733.41/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3333333.33 reads per min processed...  
 3272727.27 reads per min processed...  
 3230769.23 reads per min processed...  
 3428571.43 reads per min processed...  
 3600000.00 reads per min processed...  
 3529411.76 reads per min processed...  
 3473684.21 reads per min processed...  
 3600000.00 reads per min processed...  
 3545454.55 reads per min processed...  
 3500000.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.vbIAxnqQin/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -42726.935387
EM: Round [1] log likelihood: -42692.275163
EM: Round [2] log likelihood: -42677.195361
EM: Round [3] log likelihood: -42669.411713
EM: Round [4] log likelihood: -42665.084980
EM: Round [5] log likelihood: -42662.595847
EM: Round [6] log likelihood: -42661.132741
EM: Round [7] log likelihood: -42660.254943
EM: Round [8] log likelihood: -42659.715773
EM: Round [9] log likelihood: -42659.375624
EM: Round [10] log likelihood: -42659.154799
EM: Round [11] log likelihood: -42659.007230
EM: Round [12] log likelihood: -42658.905811
EM: Round [13] log likelihood: -42658.834248
EM: Round [14] log likelihood: -42658.782506
EM: Round [15] log likelihood: -42658.744250
EM: Round [16] log likelihood: -42658.715382
EM: Round [17] log likelihood: -42658.693191
EM: Round [18] log likelihood: -42658.675841
EM: Round [19] log likelihood: -42658.662068
EM: Round [20] log likelihood: -42658.650983
EM: Round [21] log likelihood: -42658.641952
EM: Round [22] log likelihood: -42658.634516
EM: Round [23] log likelihood: -42658.628333
EM: Round [24] log likelihood: -42658.623152
EM: Round [25] log likelihood: -42658.618779
EM: Round [26] log likelihood: -42658.615066
EM: Round [27] log likelihood: -42658.611896
EM: Round [28] log likelihood: -42658.609179
EM: Round [29] log likelihood: -42658.606842
EM: Round [30] log likelihood: -42658.604823
EM: Round [31] log likelihood: -42658.603076
EM: Round [32] log likelihood: -42658.601560
EM: Round [33] log likelihood: -42658.600241
EM: Round [34] log likelihood: -42658.599091
EM: Round [35] log likelihood: -42658.598088
EM: Round [36] log likelihood: -42658.597210
EM: Round [37] log likelihood: -42658.596441
EM: Round [38] log likelihood: -42658.595766
EM: Round [39] log likelihood: -42658.595173
EM: Round [40] log likelihood: -42658.594651
EM: Round [41] log likelihood: -42658.594191
EM: Round [42] log likelihood: -42658.593785
EM: Round [43] log likelihood: -42658.593425
EM: Round [44] log likelihood: -42658.593107
EM: Round [45] log likelihood: -42658.592824
EM: Round [46] log likelihood: -42658.592573
EM: Round [47] log likelihood: -42658.592349
EM: Round [48] log likelihood: -42658.592149
EM: Round [49] log likelihood: -42658.591971
EM: Round [50] log likelihood: -42658.591811
EM: Round [51] log likelihood: -42658.591667
EM: Round [52] log likelihood: -42658.591537
EM: Round [53] log likelihood: -42658.591420
EM: Round [54] log likelihood: -42658.591315
EM: Round [55] log likelihood: -42658.591219
EM: Stopping iterations at round 55 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -42718.995225
EM: Round [1] log likelihood: -42688.336951
EM: Round [2] log likelihood: -42674.988132
EM: Round [3] log likelihood: -42668.138408
EM: Round [4] log likelihood: -42664.343047
EM: Round [5] log likelihood: -42662.156937
EM: Round [6] log likelihood: -42660.866734
EM: Round [7] log likelihood: -42660.088528
EM: Round [8] log likelihood: -42659.607736
EM: Round [9] log likelihood: -42659.302605
EM: Round [10] log likelihood: -42659.103359
EM: Round [11] log likelihood: -42658.969485
EM: Round [12] log likelihood: -42658.877033
EM: Round [13] log likelihood: -42658.811534
EM: Round [14] log likelihood: -42658.764029
EM: Round [15] log likelihood: -42658.728833
EM: Round [16] log likelihood: -42658.702248
EM: Round [17] log likelihood: -42658.681813
EM: Round [18] log likelihood: -42658.665854
EM: Round [19] log likelihood: -42658.653211
EM: Round [20] log likelihood: -42658.643065
EM: Round [21] log likelihood: -42658.634828
EM: Round [22] log likelihood: -42658.628074
EM: Round [23] log likelihood: -42658.622485
EM: Round [24] log likelihood: -42658.617825
EM: Round [25] log likelihood: -42658.613912
EM: Round [26] log likelihood: -42658.610607
EM: Round [27] log likelihood: -42658.607802
EM: Round [28] log likelihood: -42658.605411
EM: Round [29] log likelihood: -42658.603365
EM: Round [30] log likelihood: -42658.601609
EM: Round [31] log likelihood: -42658.600098
EM: Round [32] log likelihood: -42658.598794
EM: Round [33] log likelihood: -42658.597667
EM: Round [34] log likelihood: -42658.596691
EM: Round [35] log likelihood: -42658.595845
EM: Round [36] log likelihood: -42658.595109
EM: Round [37] log likelihood: -42658.594469
EM: Round [38] log likelihood: -42658.593912
EM: Round [39] log likelihood: -42658.593426
EM: Round [40] log likelihood: -42658.593001
EM: Round [41] log likelihood: -42658.592630
EM: Round [42] log likelihood: -42658.592306
EM: Round [43] log likelihood: -42658.592021
EM: Round [44] log likelihood: -42658.591772
EM: Round [45] log likelihood: -42658.591553
EM: Round [46] log likelihood: -42658.591360
EM: Round [47] log likelihood: -42658.591191
EM: Round [48] log likelihood: -42658.591041
EM: Round [49] log likelihood: -42658.590909
EM: Round [50] log likelihood: -42658.590792
EM: Round [51] log likelihood: -42658.590689
EM: Round [52] log likelihood: -42658.590597
EM: Stopping iterations at round 52 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 13874867 > /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir > /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir --annotate /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir
-done, see /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 386, filtered: 3900)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.vbIAxnqQin/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.vbIAxnqQin/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000228590.2]
WARNING, no entry stored in dbm for [ENSG00000232618.2]
WARNING, no entry stored in dbm for [ENSG00000266905.1]
WARNING, no entry stored in dbm for [ENSG00000250385.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000251046.2]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000251359.4]
WARNING, no entry stored in dbm for [ENSG00000236736.1]
WARNING, no entry stored in dbm for [ENSG00000242435.1]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000286042.1]
WARNING, no entry stored in dbm for [ENSG00000226862.1]
WARNING, no entry stored in dbm for [ENSG00000266677.1]
WARNING, no entry stored in dbm for [ENSG00000229436.1]
WARNING, no entry stored in dbm for [ENSG00000177822.8]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000106610.15]
WARNING, no entry stored in dbm for [ENSG00000260417.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000262712.1]
WARNING, no entry stored in dbm for [ENSG00000204044.6]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000230993.1]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000241529.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000276047.1]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000239607.3]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000243365.3]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000200243.1]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000201583.1]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000200783.1]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000199691.1]
WARNING, no entry stored in dbm for [ENSG00000200312.1]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000287335.1]
WARNING, no entry stored in dbm for [ENSG00000259564.2]
WARNING, no entry stored in dbm for [ENSG00000127957.18]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000257815.7]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000286969.1]
WARNING, no entry stored in dbm for [ENSG00000222969.1]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000244479.7]
WARNING, no entry stored in dbm for [ENSG00000204959.4]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000254333.1]
WARNING, no entry stored in dbm for [ENSG00000253931.1]
WARNING, no entry stored in dbm for [ENSG00000253931.1]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000233718.8]
WARNING, no entry stored in dbm for [ENSG00000288531.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000233325.3]
WARNING, no entry stored in dbm for [ENSG00000271428.1]
WARNING, no entry stored in dbm for [ENSG00000258057.6]
WARNING, no entry stored in dbm for [ENSG00000224173.2]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000232190.3]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000214823.3]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [ENSG00000189002.10]
WARNING, no entry stored in dbm for [ENSG00000234569.1]
WARNING, no entry stored in dbm for [ENSG00000238832.1]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000234785.1]
WARNING, no entry stored in dbm for [ENSG00000236290.1]
WARNING, no entry stored in dbm for [ENSG00000287612.1]
WARNING, no entry stored in dbm for [ENSG00000244380.1]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000223692.1]
WARNING, no entry stored in dbm for [ENSG00000270839.1]
WARNING, no entry stored in dbm for [ENSG00000255308.1]
WARNING, no entry stored in dbm for [ENSG00000260398.1]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000225583.1]
WARNING, no entry stored in dbm for [ENSG00000226312.7]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000200855.1]
WARNING, no entry stored in dbm for [ENSG00000235574.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000285955.1]
WARNING, no entry stored in dbm for [ENSG00000267533.1]
WARNING, no entry stored in dbm for [ENSG00000227726.1]
WARNING, no entry stored in dbm for [ENSG00000245156.1]
WARNING, no entry stored in dbm for [ENSG00000287088.1]
WARNING, no entry stored in dbm for [ENSG00000272100.1]
WARNING, no entry stored in dbm for [ENSG00000277973.1]
WARNING, no entry stored in dbm for [ENSG00000225720.6]
WARNING, no entry stored in dbm for [ENSG00000247373.3]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000275431.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000258320.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000272556.2]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000268729.1]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000286970.1]
WARNING, no entry stored in dbm for [ENSG00000259560.2]
WARNING, no entry stored in dbm for [ENSG00000257453.1]
WARNING, no entry stored in dbm for [ENSG00000247199.5]
WARNING, no entry stored in dbm for [ENSG00000264067.1]
WARNING, no entry stored in dbm for [ENSG00000250697.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.vbIAxnqQin/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)