-ctat genome lib [/tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.XrSwELeOAf/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary
-sample contains 292970718 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir  -J /tmp/nxf.XrSwELeOAf/HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.Chimeric.out.junction  -O /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.XrSwELeOAf/HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2640-building interval tree based on /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[4290000], rate=95016.61/min -building interval tree based on /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[4040000], rate=58849.24/min 
[4050000], rate=58866.28/min 
[4060000], rate=58869.02/min 
[4070000], rate=58871.75/min 
[4080000], rate=58888.62/min 
[4090000], rate=58919.57/min 
[4100000], rate=58950.40/min 
[4110000], rate=58981.10/min 
[4120000], rate=59011.70/min 
[4130000], rate=59056.24/min 
[4140000], rate=59086.58/min 
[4150000], rate=59102.78/min 
[4160000], rate=59132.91/min 
[4170000], rate=59162.92/min 
[4180000], rate=59192.83/min 
[4190000], rate=59250.53/min 
[4200000], rate=59294.12/min 
[4210000], rate=59337.56/min 
[4220000], rate=59380.86/min 
[4230000], rate=59410.11/min 
[4240000], rate=59453.14/min 
[4250000], rate=59509.92/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 6857142.86 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.XrSwELeOAf/HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -311276.089008
EM: Round [1] log likelihood: -310786.149095
EM: Round [2] log likelihood: -310601.614479
EM: Round [3] log likelihood: -310514.591481
EM: Round [4] log likelihood: -310468.871990
EM: Round [5] log likelihood: -310443.266415
EM: Round [6] log likelihood: -310428.208517
EM: Round [7] log likelihood: -310418.945818
EM: Round [8] log likelihood: -310412.997123
EM: Round [9] log likelihood: -310409.020772
EM: Round [10] log likelihood: -310406.265716
EM: Round [11] log likelihood: -310404.295912
EM: Round [12] log likelihood: -310402.848711
EM: Round [13] log likelihood: -310401.760186
EM: Round [14] log likelihood: -310400.924587
EM: Round [15] log likelihood: -310400.271607
EM: Round [16] log likelihood: -310399.753235
EM: Round [17] log likelihood: -310399.335894
EM: Round [18] log likelihood: -310398.995611
EM: Round [19] log likelihood: -310398.714955
EM: Round [20] log likelihood: -310398.481041
EM: Round [21] log likelihood: -310398.284208
EM: Round [22] log likelihood: -310398.117120
EM: Round [23] log likelihood: -310397.974133
EM: Round [24] log likelihood: -310397.850862
EM: Round [25] log likelihood: -310397.743863
EM: Round [26] log likelihood: -310397.650403
EM: Round [27] log likelihood: -310397.568297
EM: Round [28] log likelihood: -310397.495780
EM: Round [29] log likelihood: -310397.431417
EM: Round [30] log likelihood: -310397.374031
EM: Round [31] log likelihood: -310397.322649
EM: Round [32] log likelihood: -310397.276463
EM: Round [33] log likelihood: -310397.234796
EM: Round [34] log likelihood: -310397.197079
EM: Round [35] log likelihood: -310397.162828
EM: Round [36] log likelihood: -310397.131633
EM: Round [37] log likelihood: -310397.103143
EM: Round [38] log likelihood: -310397.077055
EM: Round [39] log likelihood: -310397.053107
EM: Round [40] log likelihood: -310397.031075
EM: Round [41] log likelihood: -310397.010759
EM: Round [42] log likelihood: -310396.991988
EM: Round [43] log likelihood: -310396.974611
EM: Round [44] log likelihood: -310396.958494
EM: Round [45] log likelihood: -310396.943520
EM: Round [46] log likelihood: -310396.929584
EM: Round [47] log likelihood: -310396.916594
EM: Round [48] log likelihood: -310396.904468
EM: Round [49] log likelihood: -310396.893131
EM: Round [50] log likelihood: -310396.882517
EM: Round [51] log likelihood: -310396.872568
EM: Round [52] log likelihood: -310396.863230
EM: Round [53] log likelihood: -310396.854455
EM: Round [54] log likelihood: -310396.846199
EM: Round [55] log likelihood: -310396.838423
EM: Round [56] log likelihood: -310396.831091
EM: Round [57] log likelihood: -310396.824172
EM: Round [58] log likelihood: -310396.817634
EM: Round [59] log likelihood: -310396.811452
EM: Round [60] log likelihood: -310396.805601
EM: Round [61] log likelihood: -310396.800058
EM: Round [62] log likelihood: -310396.794802
EM: Round [63] log likelihood: -310396.789815
EM: Round [64] log likelihood: -310396.785079
EM: Round [65] log likelihood: -310396.780578
EM: Round [66] log likelihood: -310396.776297
EM: Round [67] log likelihood: -310396.772223
EM: Round [68] log likelihood: -310396.768342
EM: Round [69] log likelihood: -310396.764644
EM: Round [70] log likelihood: -310396.761117
EM: Round [71] log likelihood: -310396.757751
EM: Round [72] log likelihood: -310396.754537
EM: Round [73] log likelihood: -310396.751467
EM: Round [74] log likelihood: -310396.748531
EM: Round [75] log likelihood: -310396.745724
EM: Round [76] log likelihood: -310396.743037
EM: Round [77] log likelihood: -310396.740464
EM: Round [78] log likelihood: -310396.737999
EM: Round [79] log likelihood: -310396.735637
EM: Round [80] log likelihood: -310396.733371
EM: Round [81] log likelihood: -310396.731198
EM: Round [82] log likelihood: -310396.729112
EM: Round [83] log likelihood: -310396.727108
EM: Round [84] log likelihood: -310396.725184
EM: Round [85] log likelihood: -310396.723334
EM: Round [86] log likelihood: -310396.721555
EM: Round [87] log likelihood: -310396.719844
EM: Round [88] log likelihood: -310396.718198
EM: Round [89] log likelihood: -310396.716613
EM: Round [90] log likelihood: -310396.715086
EM: Round [91] log likelihood: -310396.713615
EM: Round [92] log likelihood: -310396.712198
EM: Round [93] log likelihood: -310396.710831
EM: Round [94] log likelihood: -310396.709513
EM: Round [95] log likelihood: -310396.708242
EM: Round [96] log likelihood: -310396.707014
EM: Round [97] log likelihood: -310396.705829
EM: Round [98] log likelihood: -310396.704685
EM: Round [99] log likelihood: -310396.703579
EM: Round [100] log likelihood: -310396.702510
EM: Round [101] log likelihood: -310396.701477
EM: Round [102] log likelihood: -310396.700478
EM: Round [103] log likelihood: -310396.699512
EM: Round [104] log likelihood: -310396.698577
EM: Round [105] log likelihood: -310396.697671
EM: Round [106] log likelihood: -310396.696795
EM: Round [107] log likelihood: -310396.695946
EM: Round [108] log likelihood: -310396.695124
EM: Round [109] log likelihood: -310396.694327
EM: Round [110] log likelihood: -310396.693555
EM: Round [111] log likelihood: -310396.692806
EM: Round [112] log likelihood: -310396.692080
EM: Round [113] log likelihood: -310396.691375
EM: Round [114] log likelihood: -310396.690692
EM: Round [115] log likelihood: -310396.690028
EM: Round [116] log likelihood: -310396.689384
EM: Round [117] log likelihood: -310396.688758
EM: Round [118] log likelihood: -310396.688151
EM: Round [119] log likelihood: -310396.687560
EM: Round [120] log likelihood: -310396.686986
EM: Round [121] log likelihood: -310396.686429
EM: Round [122] log likelihood: -310396.685886
EM: Round [123] log likelihood: -310396.685359
EM: Round [124] log likelihood: -310396.684846
EM: Round [125] log likelihood: -310396.684347
EM: Round [126] log likelihood: -310396.683861
EM: Round [127] log likelihood: -310396.683388
EM: Round [128] log likelihood: -310396.682927
EM: Round [129] log likelihood: -310396.682479
EM: Round [130] log likelihood: -310396.682042
EM: Round [131] log likelihood: -310396.681617
EM: Round [132] log likelihood: -310396.681202
EM: Round [133] log likelihood: -310396.680798
EM: Round [134] log likelihood: -310396.680404
EM: Round [135] log likelihood: -310396.680020
EM: Round [136] log likelihood: -310396.679645
EM: Round [137] log likelihood: -310396.679279
EM: Round [138] log likelihood: -310396.678923
EM: Round [139] log likelihood: -310396.678575
EM: Round [140] log likelihood: -310396.678235
EM: Round [141] log likelihood: -310396.677903
EM: Round [142] log likelihood: -310396.677580
EM: Round [143] log likelihood: -310396.677263
EM: Round [144] log likelihood: -310396.676955
EM: Round [145] log likelihood: -310396.676653
EM: Round [146] log likelihood: -310396.676358
EM: Round [147] log likelihood: -310396.676070
EM: Round [148] log likelihood: -310396.675788
EM: Round [149] log likelihood: -310396.675513
EM: Round [150] log likelihood: -310396.675244
EM: Round [151] log likelihood: -310396.674980
EM: Round [152] log likelihood: -310396.674723
EM: Round [153] log likelihood: -310396.674471
EM: Round [154] log likelihood: -310396.674225
EM: Round [155] log likelihood: -310396.673983
EM: Round [156] log likelihood: -310396.673747
EM: Round [157] log likelihood: -310396.673516
EM: Round [158] log likelihood: -310396.673290
EM: Round [159] log likelihood: -310396.673069
EM: Round [160] log likelihood: -310396.672852
EM: Round [161] log likelihood: -310396.672639
EM: Round [162] log likelihood: -310396.672431
EM: Round [163] log likelihood: -310396.672228
EM: Round [164] log likelihood: -310396.672028
EM: Round [165] log likelihood: -310396.671832
EM: Round [166] log likelihood: -310396.671640
EM: Round [167] log likelihood: -310396.671452
EM: Round [168] log likelihood: -310396.671268
EM: Round [169] log likelihood: -310396.671087
EM: Round [170] log likelihood: -310396.670910
EM: Round [171] log likelihood: -310396.670736
EM: Round [172] log likelihood: -310396.670566
EM: Round [173] log likelihood: -310396.670399
EM: Round [174] log likelihood: -310396.670235
EM: Round [175] log likelihood: -310396.670074
EM: Round [176] log likelihood: -310396.669916
EM: Round [177] log likelihood: -310396.669761
EM: Round [178] log likelihood: -310396.669609
EM: Round [179] log likelihood: -310396.669460
EM: Round [180] log likelihood: -310396.669314
EM: Round [181] log likelihood: -310396.669170
EM: Round [182] log likelihood: -310396.669029
EM: Round [183] log likelihood: -310396.668890
EM: Round [184] log likelihood: -310396.668754
EM: Round [185] log likelihood: -310396.668620
EM: Round [186] log likelihood: -310396.668489
EM: Round [187] log likelihood: -310396.668360
EM: Round [188] log likelihood: -310396.668233
EM: Round [189] log likelihood: -310396.668109
EM: Round [190] log likelihood: -310396.667986
EM: Round [191] log likelihood: -310396.667866
EM: Round [192] log likelihood: -310396.667748
EM: Round [193] log likelihood: -310396.667632
EM: Round [194] log likelihood: -310396.667518
EM: Round [195] log likelihood: -310396.667406
EM: Round [196] log likelihood: -310396.667296
EM: Round [197] log likelihood: -310396.667187
EM: Round [198] log likelihood: -310396.667081
EM: Round [199] log likelihood: -310396.666976
EM: Round [200] log likelihood: -310396.666873
EM: Round [201] log likelihood: -310396.666772
EM: Round [202] log likelihood: -310396.666672
EM: Stopping iterations at round 202 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -311073.255647
EM: Round [1] log likelihood: -310644.909798
EM: Round [2] log likelihood: -310491.971062
EM: Round [3] log likelihood: -310422.195491
EM: Round [4] log likelihood: -310386.226255
EM: Round [5] log likelihood: -310366.258905
EM: Round [6] log likelihood: -310354.543120
EM: Round [7] log likelihood: -310347.326352
EM: Round [8] log likelihood: -310342.678203
EM: Round [9] log likelihood: -310339.561684
EM: Round [10] log likelihood: -310337.397105
EM: Round [11] log likelihood: -310335.847328
EM: Round [12] log likelihood: -310334.708542
EM: Round [13] log likelihood: -310333.852942
EM: Round [14] log likelihood: -310333.197649
EM: Round [15] log likelihood: -310332.687276
EM: Round [16] log likelihood: -310332.283821
EM: Round [17] log likelihood: -310331.960605
EM: Round [18] log likelihood: -310331.698519
EM: Round [19] log likelihood: -310331.483637
EM: Round [20] log likelihood: -310331.305655
EM: Round [21] log likelihood: -310331.156845
EM: Round [22] log likelihood: -310331.031336
EM: Round [23] log likelihood: -310330.924624
EM: Round [24] log likelihood: -310330.833211
EM: Round [25] log likelihood: -310330.754359
EM: Round [26] log likelihood: -310330.685902
EM: Round [27] log likelihood: -310330.626112
EM: Round [28] log likelihood: -310330.573602
EM: Round [29] log likelihood: -310330.527246
EM: Round [30] log likelihood: -310330.486128
EM: Round [31] log likelihood: -310330.449491
EM: Round [32] log likelihood: -310330.416712
EM: Round [33] log likelihood: -310330.387272
EM: Round [34] log likelihood: -310330.360733
EM: Round [35] log likelihood: -310330.336730
EM: Round [36] log likelihood: -310330.314952
EM: Round [37] log likelihood: -310330.295135
EM: Round [38] log likelihood: -310330.277051
EM: Round [39] log likelihood: -310330.260507
EM: Round [40] log likelihood: -310330.245334
EM: Round [41] log likelihood: -310330.231387
EM: Round [42] log likelihood: -310330.218538
EM: Round [43] log likelihood: -310330.206679
EM: Round [44] log likelihood: -310330.195710
EM: Round [45] log likelihood: -310330.185547
EM: Round [46] log likelihood: -310330.176114
EM: Round [47] log likelihood: -310330.167344
EM: Round [48] log likelihood: -310330.159179
EM: Round [49] log likelihood: -310330.151564
EM: Round [50] log likelihood: -310330.144454
EM: Round [51] log likelihood: -310330.137805
EM: Round [52] log likelihood: -310330.131579
EM: Round [53] log likelihood: -310330.125743
EM: Round [54] log likelihood: -310330.120266
EM: Round [55] log likelihood: -310330.115119
EM: Round [56] log likelihood: -310330.110278
EM: Round [57] log likelihood: -310330.105720
EM: Round [58] log likelihood: -310330.101423
EM: Round [59] log likelihood: -310330.097369
EM: Round [60] log likelihood: -310330.093540
EM: Round [61] log likelihood: -310330.089922
EM: Round [62] log likelihood: -310330.086498
EM: Round [63] log likelihood: -310330.083256
EM: Round [64] log likelihood: -310330.080184
EM: Round [65] log likelihood: -310330.077270
EM: Round [66] log likelihood: -310330.074505
EM: Round [67] log likelihood: -310330.071878
EM: Round [68] log likelihood: -310330.069381
EM: Round [69] log likelihood: -310330.067006
EM: Round [70] log likelihood: -310330.064745
EM: Round [71] log likelihood: -310330.062591
EM: Round [72] log likelihood: -310330.060538
EM: Round [73] log likelihood: -310330.058580
EM: Round [74] log likelihood: -310330.056711
EM: Round [75] log likelihood: -310330.054926
EM: Round [76] log likelihood: -310330.053220
EM: Round [77] log likelihood: -310330.051589
EM: Round [78] log likelihood: -310330.050029
EM: Round [79] log likelihood: -310330.048535
EM: Round [80] log likelihood: -310330.047105
EM: Round [81] log likelihood: -310330.045734
EM: Round [82] log likelihood: -310330.044419
EM: Round [83] log likelihood: -310330.043158
EM: Round [84] log likelihood: -310330.041947
EM: Round [85] log likelihood: -310330.040785
EM: Round [86] log likelihood: -310330.039667
EM: Round [87] log likelihood: -310330.038593
EM: Round [88] log likelihood: -310330.037560
EM: Round [89] log likelihood: -310330.036566
EM: Round [90] log likelihood: -310330.035610
EM: Round [91] log likelihood: -310330.034688
EM: Round [92] log likelihood: -310330.033800
EM: Round [93] log likelihood: -310330.032943
EM: Round [94] log likelihood: -310330.032118
EM: Round [95] log likelihood: -310330.031321
EM: Round [96] log likelihood: -310330.030552
EM: Round [97] log likelihood: -310330.029809
EM: Round [98] log likelihood: -310330.029091
EM: Round [99] log likelihood: -310330.028397
EM: Round [100] log likelihood: -310330.027727
EM: Round [101] log likelihood: -310330.027078
EM: Round [102] log likelihood: -310330.026450
EM: Round [103] log likelihood: -310330.025842
EM: Round [104] log likelihood: -310330.025253
EM: Round [105] log likelihood: -310330.024683
EM: Round [106] log likelihood: -310330.024130
EM: Round [107] log likelihood: -310330.023594
EM: Round [108] log likelihood: -310330.023074
EM: Round [109] log likelihood: -310330.022570
EM: Round [110] log likelihood: -310330.022080
EM: Round [111] log likelihood: -310330.021605
EM: Round [112] log likelihood: -310330.021143
EM: Round [113] log likelihood: -310330.020694
EM: Round [114] log likelihood: -310330.020258
EM: Round [115] log likelihood: -310330.019834
EM: Round [116] log likelihood: -310330.019422
EM: Round [117] log likelihood: -310330.019021
EM: Round [118] log likelihood: -310330.018631
EM: Round [119] log likelihood: -310330.018251
EM: Round [120] log likelihood: -310330.017881
EM: Round [121] log likelihood: -310330.017520
EM: Round [122] log likelihood: -310330.017169
EM: Round [123] log likelihood: -310330.016827
EM: Round [124] log likelihood: -310330.016493
EM: Round [125] log likelihood: -310330.016168
EM: Round [126] log likelihood: -310330.015851
EM: Round [127] log likelihood: -310330.015541
EM: Round [128] log likelihood: -310330.015239
EM: Round [129] log likelihood: -310330.014944
EM: Round [130] log likelihood: -310330.014656
EM: Round [131] log likelihood: -310330.014374
EM: Round [132] log likelihood: -310330.014099
EM: Round [133] log likelihood: -310330.013831
EM: Round [134] log likelihood: -310330.013568
EM: Round [135] log likelihood: -310330.013312
EM: Round [136] log likelihood: -310330.013061
EM: Round [137] log likelihood: -310330.012815
EM: Round [138] log likelihood: -310330.012575
EM: Round [139] log likelihood: -310330.012340
EM: Round [140] log likelihood: -310330.012111
EM: Round [141] log likelihood: -310330.011885
EM: Round [142] log likelihood: -310330.011665
EM: Round [143] log likelihood: -310330.011449
EM: Round [144] log likelihood: -310330.011238
EM: Round [145] log likelihood: -310330.011031
EM: Round [146] log likelihood: -310330.010828
EM: Round [147] log likelihood: -310330.010630
EM: Round [148] log likelihood: -310330.010435
EM: Round [149] log likelihood: -310330.010244
EM: Round [150] log likelihood: -310330.010057
EM: Round [151] log likelihood: -310330.009873
EM: Round [152] log likelihood: -310330.009693
EM: Round [153] log likelihood: -310330.009517
EM: Round [154] log likelihood: -310330.009343
EM: Round [155] log likelihood: -310330.009173
EM: Round [156] log likelihood: -310330.009007
EM: Round [157] log likelihood: -310330.008843
EM: Round [158] log likelihood: -310330.008682
EM: Round [159] log likelihood: -310330.008524
EM: Round [160] log likelihood: -310330.008370
EM: Round [161] log likelihood: -310330.008217
EM: Round [162] log likelihood: -310330.008068
EM: Round [163] log likelihood: -310330.007921
EM: Round [164] log likelihood: -310330.007777
EM: Round [165] log likelihood: -310330.007636
EM: Round [166] log likelihood: -310330.007497
EM: Round [167] log likelihood: -310330.007360
EM: Round [168] log likelihood: -310330.007226
EM: Round [169] log likelihood: -310330.007093
EM: Round [170] log likelihood: -310330.006964
EM: Round [171] log likelihood: -310330.006836
EM: Round [172] log likelihood: -310330.006711
EM: Round [173] log likelihood: -310330.006587
EM: Round [174] log likelihood: -310330.006466
EM: Round [175] log likelihood: -310330.006347
EM: Round [176] log likelihood: -310330.006230
EM: Round [177] log likelihood: -310330.006114
EM: Round [178] log likelihood: -310330.006001
EM: Round [179] log likelihood: -310330.005889
EM: Round [180] log likelihood: -310330.005779
EM: Round [181] log likelihood: -310330.005671
EM: Round [182] log likelihood: -310330.005565
EM: Round [183] log likelihood: -310330.005461
EM: Round [184] log likelihood: -310330.005358
EM: Round [185] log likelihood: -310330.005256
EM: Round [186] log likelihood: -310330.005157
EM: Stopping iterations at round 186 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 292970718 > /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir > /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir --annotate /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir
-done, see /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1491, filtered: 11163)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.XrSwELeOAf/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.XrSwELeOAf/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000239268.3]
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WARNING, no entry stored in dbm for [ENSG00000287286.1]
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WARNING, no entry stored in dbm for [ENSG00000271714.1]
WARNING, no entry stored in dbm for [ENSG00000235705.6]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000279608.1]
WARNING, no entry stored in dbm for [ENSG00000254840.1]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000253882.6]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000286870.1]
WARNING, no entry stored in dbm for [ENSG00000233219.1]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000152117.17]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000172250.16]
WARNING, no entry stored in dbm for [ENSG00000233746.2]
WARNING, no entry stored in dbm for [ENSG00000205212.5]
WARNING, no entry stored in dbm for [ENSG00000283792.1]
WARNING, no entry stored in dbm for [ENSG00000224287.2]
WARNING, no entry stored in dbm for [ENSG00000257474.5]
WARNING, no entry stored in dbm for [ENSG00000225802.3]
WARNING, no entry stored in dbm for [ENSG00000235989.4]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000204682.8]
WARNING, no entry stored in dbm for [ENSG00000272690.6]
WARNING, no entry stored in dbm for [ENSG00000236432.8]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000232098.3]
WARNING, no entry stored in dbm for [ENSG00000286045.1]
WARNING, no entry stored in dbm for [ENSG00000267532.5]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000197099.8]
WARNING, no entry stored in dbm for [ENSG00000261710.1]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000257139.1]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000251619.1]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000256906.1]
WARNING, no entry stored in dbm for [ENSG00000206187.4]
WARNING, no entry stored in dbm for [ENSG00000234634.2]
WARNING, no entry stored in dbm for [ENSG00000267065.2]
WARNING, no entry stored in dbm for [ENSG00000262585.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000262585.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000283503.2]
WARNING, no entry stored in dbm for [ENSG00000231327.1]
WARNING, no entry stored in dbm for [ENSG00000232046.7]
WARNING, no entry stored in dbm for [ENSG00000230525.6]
WARNING, no entry stored in dbm for [ENSG00000224961.3]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000222005.9]
WARNING, no entry stored in dbm for [ENSG00000267603.1]
WARNING, no entry stored in dbm for [ENSG00000213250.5]
WARNING, no entry stored in dbm for [ENSG00000241769.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000283945.1]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000177369.9]
WARNING, no entry stored in dbm for [ENSG00000203993.6]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000218347.2]
WARNING, no entry stored in dbm for [ENSG00000257495.5]
WARNING, no entry stored in dbm for [ENSG00000227004.2]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000265485.7]
WARNING, no entry stored in dbm for [ENSG00000265485.7]
WARNING, no entry stored in dbm for [ENSG00000225652.2]
WARNING, no entry stored in dbm for [ENSG00000249923.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000245008.4]
WARNING, no entry stored in dbm for [ENSG00000272141.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000238072.1]
WARNING, no entry stored in dbm for [ENSG00000236124.1]
WARNING, no entry stored in dbm for [ENSG00000230459.3]
WARNING, no entry stored in dbm for [ENSG00000215283.3]
WARNING, no entry stored in dbm for [ENSG00000255391.1]
WARNING, no entry stored in dbm for [ENSG00000256542.2]
WARNING, no entry stored in dbm for [ENSG00000259994.1]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000226363.3]
WARNING, no entry stored in dbm for [ENSG00000288090.1]
WARNING, no entry stored in dbm for [ENSG00000233369.7]
WARNING, no entry stored in dbm for [ENSG00000255199.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000237476.1]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000259993.1]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000226547.2]
WARNING, no entry stored in dbm for [ENSG00000283907.1]
WARNING, no entry stored in dbm for [ENSG00000226443.3]
WARNING, no entry stored in dbm for [ENSG00000286080.1]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000235023.1]
WARNING, no entry stored in dbm for [ENSG00000273888.1]
WARNING, no entry stored in dbm for [ENSG00000235154.1]
WARNING, no entry stored in dbm for [ENSG00000273629.1]
WARNING, no entry stored in dbm for [ENSG00000253134.1]
WARNING, no entry stored in dbm for [ENSG00000275620.1]
WARNING, no entry stored in dbm for [ENSG00000287226.1]
WARNING, no entry stored in dbm for [ENSG00000248634.1]
WARNING, no entry stored in dbm for [ENSG00000286341.1]
WARNING, no entry stored in dbm for [ENSG00000232526.1]
WARNING, no entry stored in dbm for [ENSG00000278908.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000183250.12]
WARNING, no entry stored in dbm for [ENSG00000271119.1]
WARNING, no entry stored in dbm for [ENSG00000231976.8]
WARNING, no entry stored in dbm for [ENSG00000231113.2]
WARNING, no entry stored in dbm for [ENSG00000261211.1]
WARNING, no entry stored in dbm for [ENSG00000256995.8]
WARNING, no entry stored in dbm for [ENSG00000002079.14]
WARNING, no entry stored in dbm for [ENSG00000225449.3]
WARNING, no entry stored in dbm for [ENSG00000253235.2]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000229847.9]
WARNING, no entry stored in dbm for [ENSG00000234152.1]
WARNING, no entry stored in dbm for [ENSG00000234765.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000250346.1]
WARNING, no entry stored in dbm for [ENSG00000226845.1]
WARNING, no entry stored in dbm for [ENSG00000233221.7]
WARNING, no entry stored in dbm for [ENSG00000256508.2]
WARNING, no entry stored in dbm for [ENSG00000224071.1]
WARNING, no entry stored in dbm for [ENSG00000177337.8]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000260515.1]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000206129.4]
WARNING, no entry stored in dbm for [ENSG00000206129.4]
WARNING, no entry stored in dbm for [ENSG00000274979.1]
WARNING, no entry stored in dbm for [ENSG00000130612.16]
WARNING, no entry stored in dbm for [ENSG00000277806.1]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000253474.2]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000267583.5]
WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000238184.1]
WARNING, no entry stored in dbm for [ENSG00000180422.3]
WARNING, no entry stored in dbm for [ENSG00000253891.2]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000237604.1]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000277289.1]
WARNING, no entry stored in dbm for [ENSG00000226066.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000245573.9]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000179899.8]
WARNING, no entry stored in dbm for [ENSG00000229800.1]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000231461.1]
WARNING, no entry stored in dbm for [ENSG00000229886.1]
WARNING, no entry stored in dbm for [ENSG00000265802.2]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000260372.7]
WARNING, no entry stored in dbm for [ENSG00000260081.2]
WARNING, no entry stored in dbm for [ENSG00000256568.2]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000267199.1]
WARNING, no entry stored in dbm for [ENSG00000234034.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000251643.1]
WARNING, no entry stored in dbm for [ENSG00000230782.1]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000249602.1]
WARNING, no entry stored in dbm for [ENSG00000272161.1]
WARNING, no entry stored in dbm for [ENSG00000285634.2]
WARNING, no entry stored in dbm for [ENSG00000238260.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000259162.1]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000234173.1]
WARNING, no entry stored in dbm for [ENSG00000233406.5]
WARNING, no entry stored in dbm for [ENSG00000278413.1]
WARNING, no entry stored in dbm for [ENSG00000274929.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000234937.1]
WARNING, no entry stored in dbm for [ENSG00000227579.6]
WARNING, no entry stored in dbm for [ENSG00000272356.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000230922.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000215310.2]
WARNING, no entry stored in dbm for [ENSG00000274717.1]
WARNING, no entry stored in dbm for [ENSG00000279175.1]
WARNING, no entry stored in dbm for [ENSG00000213972.3]
WARNING, no entry stored in dbm for [ENSG00000219102.3]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000226438.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000274756.1]
WARNING, no entry stored in dbm for [ENSG00000243859.3]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000275315.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000274670.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000174407.13]
WARNING, no entry stored in dbm for [ENSG00000249364.6]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000279352.1]
WARNING, no entry stored in dbm for [ENSG00000286152.1]
WARNING, no entry stored in dbm for [ENSG00000243620.2]
WARNING, no entry stored in dbm for [ENSG00000285336.1]
WARNING, no entry stored in dbm for [ENSG00000257060.7]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000212695.5]
WARNING, no entry stored in dbm for [ENSG00000257735.1]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000236580.1]
WARNING, no entry stored in dbm for [ENSG00000213361.2]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000286401.1]
WARNING, no entry stored in dbm for [ENSG00000286163.1]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000240661.3]
WARNING, no entry stored in dbm for [ENSG00000266830.1]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000286471.1]
WARNING, no entry stored in dbm for [ENSG00000286471.1]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000262262.1]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000258488.2]
WARNING, no entry stored in dbm for [ENSG00000253416.1]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000205682.2]
WARNING, no entry stored in dbm for [ENSG00000286970.1]
WARNING, no entry stored in dbm for [ENSG00000285957.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000226380.9]
WARNING, no entry stored in dbm for [ENSG00000279792.1]
WARNING, no entry stored in dbm for [ENSG00000287292.1]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000269054.2]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000253496.3]
WARNING, no entry stored in dbm for [ENSG00000264515.6]
WARNING, no entry stored in dbm for [ENSG00000261766.1]
WARNING, no entry stored in dbm for [ENSG00000270087.5]
WARNING, no entry stored in dbm for [ENSG00000257407.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000256377.6]
WARNING, no entry stored in dbm for [ENSG00000234825.3]
WARNING, no entry stored in dbm for [ENSG00000283128.2]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000286741.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000279190.1]
WARNING, no entry stored in dbm for [ENSG00000250007.7]
WARNING, no entry stored in dbm for [ENSG00000260573.4]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000196205.8]
WARNING, no entry stored in dbm for [ENSG00000284052.1]
WARNING, no entry stored in dbm for [ENSG00000206129.4]
WARNING, no entry stored in dbm for [ENSG00000206129.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000254817.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000228204.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.XrSwELeOAf/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)