AIH curated blacklist: matched 12 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 302
Pass (FILTER=PASS): 32 (10.6%)
Fail (FILTER=FAIL): 270 (89.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 12
All 12 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 89
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 45
confidence_below_min(low<high): 15
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 4
Breakdown by confidence:
high: 32 pass, 2 fail (total: 34)
low: 0 pass, 125 fail (total: 125)
medium: 0 pass, 143 fail (total: 143)
Arriba filter: 302 rows -> 32 PASS; wrote 786-O_FFPE_RNA_0001_B23LG7FLT4_3.arriba.fusions.filtered.tsv and 786-O_FFPE_RNA_0001_B23LG7FLT4_3.arriba.fusions.filtered_pass_only.tsv
Summary written to: 786-O_FFPE_RNA_0001_B23LG7FLT4_3.arriba.fusions.filter_summary.txt