[W::hts_idx_load3] The index file is older than the data file: 22Rv1_FFPE_RNA_0001_B23LG7FLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	6827351
Known Splicing Events:	6699179
Partial Novel Splicing Events:	45856
Novel Splicing Events:	77277
Filtered Splicing Events:	5039

Total splicing  Junctions:	127628
Known Splicing Junctions:	118013
Partial Novel Splicing Junctions:	4437
Novel Splicing Junctions:	5178

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Create BED file ...
Create Interact file ...