AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)

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ARRIBA FILTERING SUMMARY
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Total fusions: 84
  Pass (FILTER=PASS): 1 (1.2%)
  Fail (FILTER=FAIL): 83 (98.8%)

AIH curated blacklist (blacklisted flag):
  Total blacklisted: 3
  All 3 blacklisted rows have FILTER=FAIL

Failure reasons (top 15):
  confidence_below_min(medium<high): 31
  confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 13
  confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
  confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
  confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
  confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 4
  aih_curated_blacklist: 1
  confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 1
  confidence_below_min(medium<high);aih_curated_blacklist: 1
  confidence_below_min(low<high): 1
  confidence_below_min(low<high);total_reads_below_min(7.0<8.0);aih_curated_blacklist: 1
  confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 1
  confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 1

Breakdown by confidence:
  high: 1 pass, 1 fail (total: 2)
  low: 0 pass, 15 fail (total: 15)
  medium: 0 pass, 67 fail (total: 67)
Arriba filter: 84 rows -> 1 PASS; wrote HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered.tsv and HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: HeadNeckN_FFPE_L08_RNA_01_B23LG7FLT4_1.arriba.fusions.filter_summary.txt