-ctat genome lib [/tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.rSZoNQaZbp/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary -sample contains 295197448 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir -J /tmp/nxf.rSZoNQaZbp/A673_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction -O /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.rSZoNQaZbp/A673_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction -building interval tree based on /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=25000.00/min [20000], rate=28571.43/min [30000], rate=30508.47/min [40000], rate=31168.83/min [50000], rate=32608.70/min [60000], rate=33644.86/min [70000], rate=30656.93/min [80000], rate=31578.95/min [90000], rate=32142.86/min [100000], rate=32258.06/min [110000], rate=33165.83/min [120000], rate=34285.71/min [130000], rate=34977.58/min [140000], rate=36206.90/min [150000], rate=37037.04/min [160000], rate=37944.66/min [170000], rate=38931.30/min [180000], rate=39852.40/min [190000], rate=40860.22/min [200000], rate=41666.67/min [210000], rate=42424.24/min [220000], rate=43278.69/min [230000], rate=44089.46/min [240000], rate=44859.81/min [250000], rate=45731.71/min [260000], rate=46428.57/min [270000], rate=46022.73/min [280000], rate=46666.67/min [290000], rate=47154.47/min [300000], rate=47872.34/min [310000], rate=48311.69/min [320000], rate=48854.96/min [330000], rate=47826.09/min [340000], rate=47331.79/min [350000], rate=46563.19/min [360000], rate=45957.45/min [370000], rate=45306.12/min [380000], rate=44881.89/min [390000], rate=44486.69/min [400000], rate=44036.70/min [410000], rate=43462.90/min [420000], rate=43150.68/min [430000], rate=42786.07/min [440000], rate=42512.08/min [450000], rate=42319.75/min [460000], rate=41818.18/min [470000], rate=41715.98/min [480000], rate=41558.44/min [490000], rate=41234.22/min [500000], rate=40760.87/min [510000], rate=40637.45/min [520000], rate=40519.48/min [530000], rate=40509.55/min [540000], rate=40449.44/min [550000], rate=40293.04/min [560000], rate=39669.42/min [570000], rate=39220.18/min [580000], rate=38623.75/min [590000], rate=38228.94/min [600000], rate=37934.67/min [610000], rate=37577.00/min [620000], rate=37386.93/min [630000], rate=37500.00/min [640000], rate=37647.06/min [650000], rate=37790.70/min [660000], rate=37931.03/min [670000], rate=37535.01/min [680000], rate=37569.06/min [690000], rate=37636.36/min [700000], rate=37433.16/min [710000], rate=37500.00/min [720000], rate=37597.91/min [730000], rate=37693.63/min [740000], rate=37787.23/min [750000], rate=37846.93/min [760000], rate=37873.75/min [770000], rate=37439.22/min [780000], rate=37590.36/min [790000], rate=37738.85/min [800000], rate=37884.77/min [810000], rate=38057.95/min [820000], rate=38228.44/min [830000], rate=38337.18/min [840000], rate=38297.87/min [850000], rate=38490.57/min [860000], rate=38796.99/min [870000], rate=39042.63/min [880000], rate=39256.51/min [890000], rate=39467.85/min [900000], rate=39705.88/min [910000], rate=39912.28/min [920000], rate=40116.28/min [930000], rate=40317.92/min [940000], rate=40546.37/min [950000], rate=40743.39/min [960000], rate=40938.17/min [970000], rate=41130.74/min [980000], rate=41408.45/min [990000], rate=41596.64/min [1000000], rate=41782.73/min [1010000], rate=41995.84/min [1020000], rate=42206.90/min [1030000], rate=42299.79/min [1040000], rate=42362.53/min [1050000], rate=42452.83/min [1060000], rate=42541.81/min [1070000], rate=42601.19/min [1080000], rate=42715.89/min [1090000], rate=42801.05/min [1100000], rate=42940.79/min [1110000], rate=43023.26/min [1120000], rate=43159.92/min [1130000], rate=43295.02/min [1140000], rate=43456.16/min [1150000], rate=43588.12/min [1160000], rate=43746.07/min [1170000], rate=43902.44/min [1180000], rate=44057.25/min [1190000], rate=44183.17/min [1200000], rate=44362.29/min [1210000], rate=44539.88/min [1220000], rate=44715.94/min [1230000], rate=44863.22/min [1240000], rate=45036.32/min [1250000], rate=45153.52/min [1260000], rate=45432.69/min [1270000], rate=45656.08/min [1280000], rate=45905.56/min [1290000], rate=46236.56/min [1300000], rate=46594.98/min [1310000], rate=46925.37/min [1320000], rate=47142.86/min [1330000], rate=47359.05/min [1340000], rate=47545.83/min [1350000], rate=47731.29/min [1360000], rate=47887.32/min [1370000], rate=48042.08/min [1380000], rate=48111.56/min [1390000], rate=48208.09/min [1400000], rate=48359.24/min [1410000], rate=48676.64/min [1420000], rate=48965.52/min [1430000], rate=49112.76/min [1440000], rate=49315.07/min [1450000], rate=49403.75/min [1460000], rate=49491.53/min [1470000], rate=49662.16/min [1480000], rate=49971.86/min [1490000], rate=50309.51/min [1500000], rate=50618.67/min [1510000], rate=50870.30/min [1520000], rate=51035.25/min [1530000], rate=51199.11/min [1540000], rate=51361.87/min [1550000], rate=51495.02/min [1560000], rate=51769.91/min [1570000], rate=52101.77/min [1580000], rate=52317.88/min [1590000], rate=52360.04/min [1600000], rate=52459.02/min [1610000], rate=52557.13/min [1620000], rate=52740.10/min [1630000], rate=53036.88/min [1640000], rate=53246.75/min [1650000], rate=53311.79/min [1660000], rate=53462.16/min [1670000], rate=53582.89/min [1680000], rate=53702.72/min [1690000], rate=53850.24/min [1700000], rate=53911.21/min [1710000], rate=54000.00/min [1720000], rate=54059.72/min [1730000], rate=54147.10/min [1740000], rate=54261.95/min [1750000], rate=54347.83/min [1760000], rate=54432.99/min [1770000], rate=54517.45/min [1780000], rate=54685.10/min [1790000], rate=54795.92/min [1800000], rate=54822.34/min [1810000], rate=54848.48/min [1820000], rate=54874.37/min [1830000], rate=54927.46/min [1840000], rate=54980.08/min [1850000], rate=55004.96/min [1860000], rate=55056.73/min [1870000], rate=55162.24/min [1880000], rate=55267.03/min [1890000], rate=55048.54/min [1900000], rate=54676.26/min [1910000], rate=54701.67/min [1920000], rate=54778.89/min [1930000], rate=54829.55/min [1940000], rate=54905.66/min [1950000], rate=54981.20/min [1960000], rate=55056.18/min [1970000], rate=55156.32/min [1980000], rate=55230.13/min [1990000], rate=55303.38/min [2000000], rate=55401.66/min [2010000], rate=55499.31/min [2020000], rate=55266.76/min [2030000], rate=54667.86/min [2040000], rate=54111.41/min [2050000], rate=53758.74/min [2060000], rate=53506.49/min [2070000], rate=53122.33/min [2080000], rate=52747.25/min [2090000], rate=52490.58/min [2100000], rate=52369.08/min [2110000], rate=52184.67/min [2120000], rate=51982.02/min [2130000], rate=51782.82/min [2140000], rate=51649.24/min [2150000], rate=51517.57/min [2160000], rate=51408.17/min [2170000], rate=51340.69/min [2180000], rate=51294.12/min [2190000], rate=51228.07/min [2200000], rate=51202.48/min [2210000], rate=51117.96/min [2220000], rate=51054.04/min [2230000], rate=51049.22/min [2240000], rate=51044.44/min [2250000], rate=51039.70/min [2260000], rate=51035.00/min [2270000], rate=51049.48/min [2280000], rate=51044.78/min [2290000], rate=51078.07/min [2300000], rate=51130.05/min [2310000], rate=51143.91/min [2320000], rate=51176.47/min [2330000], rate=51246.33/min [2340000], rate=51315.79/min [2350000], rate=51403.57/min [2360000], rate=51490.91/min [2370000], rate=51559.10/min [2380000], rate=51626.90/min [2390000], rate=51712.95/min [2400000], rate=51687.01/min [2410000], rate=51624.42/min [2420000], rate=51525.90/min [2430000], rate=51428.57/min [2440000], rate=51350.40/min [2450000], rate=51308.90/min [2460000], rate=51267.80/min [2470000], rate=51227.10/min [2480000], rate=51186.79/min [2490000], rate=51181.91/min -building interval tree based on /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=24000.00/min [20000], rate=25531.91/min [30000], rate=29508.20/min [40000], rate=31578.95/min [50000], rate=31250.00/min [60000], rate=33333.33/min [70000], rate=35000.00/min [80000], rate=36641.22/min [90000], rate=38028.17/min [100000], rate=39735.10/min [110000], rate=40993.79/min [120000], rate=42352.94/min [130000], rate=43575.42/min [140000], rate=44680.85/min [150000], rate=45918.37/min [160000], rate=46829.27/min [170000], rate=47441.86/min [180000], rate=46153.85/min [190000], rate=43846.15/min [200000], rate=42402.83/min [210000], rate=40645.16/min [220000], rate=40121.58/min [230000], rate=39884.39/min [240000], rate=39344.26/min [250000], rate=38860.10/min [260000], rate=38613.86/min [270000], rate=38571.43/min [280000], rate=37416.48/min [290000], rate=35950.41/min [300000], rate=35294.12/min [310000], rate=34444.44/min [320000], rate=34657.04/min [330000], rate=34676.01/min [340000], rate=34871.79/min [350000], rate=35175.88/min [360000], rate=35467.98/min [370000], rate=35748.79/min [380000], rate=35736.68/min [390000], rate=36000.00/min [400000], rate=35928.14/min [410000], rate=36229.75/min [420000], rate=36574.75/min [430000], rate=36647.73/min [440000], rate=36615.81/min [450000], rate=36885.25/min [460000], rate=37246.96/min [470000], rate=37700.53/min [480000], rate=38044.91/min [490000], rate=38331.16/min [500000], rate=38659.79/min [510000], rate=38980.89/min [520000], rate=39146.80/min [530000], rate=39210.85/min [540000], rate=39512.20/min [550000], rate=39807.00/min [560000], rate=39810.43/min [570000], rate=39629.20/min [580000], rate=39816.93/min [590000], rate=40136.05/min [600000], rate=40449.44/min [610000], rate=40802.68/min [620000], rate=41150.44/min [630000], rate=41356.67/min [640000], rate=41113.49/min [650000], rate=40880.50/min [660000], rate=40657.08/min [670000], rate=40483.38/min [680000], rate=40396.04/min [690000], rate=40311.59/min [700000], rate=40307.10/min [710000], rate=40264.65/min [720000], rate=40260.95/min [730000], rate=40220.39/min [740000], rate=40144.67/min [750000], rate=40035.59/min [760000], rate=39964.94/min [770000], rate=39896.37/min [780000], rate=39829.79/min [790000], rate=39798.49/min [800000], rate=39735.10/min [810000], rate=39036.14/min [820000], rate=38985.74/min [830000], rate=38785.05/min [840000], rate=38709.68/min [850000], rate=38753.80/min [860000], rate=38796.99/min [870000], rate=38868.21/min [880000], rate=38966.79/min [890000], rate=39035.09/min [900000], rate=39158.81/min [910000], rate=39224.14/min [920000], rate=39344.26/min [930000], rate=39490.45/min [940000], rate=39606.74/min [950000], rate=39748.95/min [960000], rate=39861.59/min [970000], rate=40000.00/min [980000], rate=40163.93/min [990000], rate=40298.51/min [1000000], rate=40322.58/min [1010000], rate=40508.02/min [1020000], rate=40691.49/min [1030000], rate=40900.07/min [1040000], rate=41079.66/min [1050000], rate=41149.58/min [1060000], rate=40380.95/min [1070000], rate=40074.91/min [1080000], rate=39852.40/min [1090000], rate=39588.38/min [1100000], rate=39332.54/min [1110000], rate=39153.44/min [1120000], rate=39024.39/min [1130000], rate=38898.45/min [1140000], rate=38775.51/min [1150000], rate=38677.13/min [1160000], rate=38645.20/min [1170000], rate=38571.43/min [1180000], rate=38583.11/min [1190000], rate=38615.47/min [1200000], rate=38585.21/min [1210000], rate=38575.98/min [1220000], rate=38607.59/min [1230000], rate=38618.52/min [1240000], rate=38569.21/min [1250000], rate=38600.10/min [1260000], rate=38571.43/min [1270000], rate=38446.01/min [1280000], rate=38208.96/min [1290000], rate=38203.36/min [1300000], rate=38254.05/min [1310000], rate=38304.09/min [1320000], rate=38390.69/min [1330000], rate=38513.51/min [1340000], rate=38616.71/min [1350000], rate=38663.48/min [1360000], rate=38563.33/min [1370000], rate=38591.55/min [1380000], rate=38637.42/min [1390000], rate=38700.70/min [1400000], rate=38763.27/min [1410000], rate=38807.34/min [1420000], rate=38921.88/min [1430000], rate=39035.49/min [1440000], rate=39201.45/min [1450000], rate=39348.71/min [1460000], rate=39477.24/min [1470000], rate=39622.64/min [1480000], rate=39749.33/min [1490000], rate=39698.05/min [1500000], rate=39665.05/min [1510000], rate=39632.55/min [1520000], rate=39566.16/min [1530000], rate=39517.86/min [1540000], rate=39520.96/min [1550000], rate=39507.22/min [1560000], rate=39493.67/min [1570000], rate=39530.00/min [1580000], rate=39532.94/min [1590000], rate=39437.78/min [1600000], rate=39441.25/min [1610000], rate=39444.67/min [1620000], rate=39464.07/min [1630000], rate=39515.15/min [1640000], rate=39565.74/min [1650000], rate=39631.71/min [1660000], rate=39681.27/min [1670000], rate=39730.37/min [1680000], rate=39794.71/min [1690000], rate=39889.85/min [1700000], rate=39968.65/min [1710000], rate=40062.48/min [1720000], rate=40171.27/min [1730000], rate=40279.39/min [1740000], rate=40402.48/min [1750000], rate=40509.26/min [1760000], rate=40646.65/min [1770000], rate=40783.41/min [1780000], rate=40903.87/min [1790000], rate=41023.68/min [1800000], rate=41127.19/min [1810000], rate=41089.67/min [1820000], rate=41114.46/min [1830000], rate=41123.60/min [1840000], rate=41117.32/min [1850000], rate=41126.34/min [1860000], rate=41135.27/min [1870000], rate=41144.11/min [1880000], rate=41167.88/min [1890000], rate=41206.40/min [1900000], rate=41229.66/min [1910000], rate=41282.42/min [1920000], rate=41319.94/min [1930000], rate=41371.92/min [1940000], rate=41438.23/min [1950000], rate=41504.08/min [1960000], rate=41584.16/min [1970000], rate=41663.73/min [1980000], rate=41742.80/min [1990000], rate=41806.72/min [2000000], rate=41899.44/min [2010000], rate=41977.03/min [2020000], rate=42068.73/min [2030000], rate=42159.92/min [2040000], rate=42250.60/min [2050000], rate=42384.56/min [2060000], rate=42576.64/min [2070000], rate=42709.77/min [2080000], rate=42798.35/min [2090000], rate=42901.13/min [2100000], rate=42988.74/min [2110000], rate=43105.21/min [2120000], rate=43221.20/min [2130000], rate=43322.03/min [2140000], rate=43437.08/min [2150000], rate=43536.96/min [2160000], rate=43665.77/min [2170000], rate=43750.00/min [2180000], rate=43804.42/min [2190000], rate=43785.40/min [2200000], rate=43810.16/min [2210000], rate=43834.71/min [2220000], rate=43873.52/min [2230000], rate=43940.89/min [2240000], rate=44022.27/min [2250000], rate=44045.68/min [2260000], rate=44068.90/min [2270000], rate=44120.51/min [2280000], rate=44171.78/min [2290000], rate=44236.96/min [2300000], rate=44287.55/min [2310000], rate=44337.81/min [2320000], rate=44387.76/min [2330000], rate=44437.38/min [2340000], rate=44430.38/min [2350000], rate=44451.45/min [2360000], rate=44500.31/min [2370000], rate=44493.12/min [2380000], rate=44499.84/min [2390000], rate=44506.52/min [2400000], rate=44513.14/min [2410000], rate=44547.13/min [2420000], rate=44594.59/min [2430000], rate=44655.44/min [2440000], rate=44770.64/min [2450000], rate=44885.50/min [2460000], rate=44986.28/min [2470000], rate=45086.71/min [2480000], rate=45173.04/min [2490000], rate=45259.01/min -building interval tree based on /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=20689.66/min [20000], rate=23076.92/min [30000], rate=25714.29/min [40000], rate=26373.63/min [50000], rate=27272.73/min [60000], rate=28800.00/min [70000], rate=30000.00/min [80000], rate=30967.74/min [90000], rate=31952.66/min [100000], rate=32967.03/min [110000], rate=33846.15/min [120000], rate=34951.46/min [130000], rate=35616.44/min [140000], rate=36681.22/min [150000], rate=35856.57/min [160000], rate=36501.90/min [170000], rate=37362.64/min [180000], rate=37500.00/min [190000], rate=38513.51/min [200000], rate=39344.26/min [210000], rate=40127.39/min [220000], rate=40993.79/min [230000], rate=41818.18/min [240000], rate=42729.97/min [250000], rate=43859.65/min [260000], rate=44571.43/min [270000], rate=45378.15/min [280000], rate=46153.85/min [290000], rate=46524.06/min [300000], rate=46632.12/min [310000], rate=46733.67/min [320000], rate=47058.82/min [330000], rate=47255.37/min [340000], rate=47663.55/min [350000], rate=47404.06/min [360000], rate=47577.09/min [370000], rate=47741.94/min [380000], rate=48101.27/min [390000], rate=48547.72/min [400000], rate=48879.84/min [410000], rate=49397.59/min [420000], rate=49802.37/min [430000], rate=50194.55/min [440000], rate=50671.79/min [450000], rate=50847.46/min [460000], rate=50642.20/min [470000], rate=50994.58/min [480000], rate=50615.11/min [490000], rate=49746.19/min [500000], rate=49586.78/min [510000], rate=49514.56/min [520000], rate=49445.32/min [530000], rate=49378.88/min [540000], rate=48868.78/min [550000], rate=48961.42/min [560000], rate=48979.59/min [570000], rate=48997.13/min [580000], rate=49152.54/min [590000], rate=49235.05/min [600000], rate=49315.07/min [610000], rate=49392.71/min [620000], rate=49533.95/min [630000], rate=49606.30/min [640000], rate=49740.93/min [650000], rate=49935.98/min [660000], rate=50126.58/min [670000], rate=50312.89/min [680000], rate=50495.05/min [690000], rate=50735.29/min [700000], rate=50970.87/min [710000], rate=51387.21/min [720000], rate=51674.64/min [730000], rate=51895.73/min [740000], rate=52173.91/min [750000], rate=52447.55/min [760000], rate=52838.93/min [770000], rate=52679.59/min [780000], rate=51315.79/min [790000], rate=49789.92/min [800000], rate=49586.78/min [810000], rate=49490.84/min [820000], rate=49447.24/min [830000], rate=49404.76/min [840000], rate=49460.26/min [850000], rate=49466.54/min [860000], rate=49472.67/min [870000], rate=49478.67/min [880000], rate=49530.96/min [890000], rate=49582.17/min [900000], rate=49678.01/min [910000], rate=49817.52/min [920000], rate=49909.58/min [930000], rate=50000.00/min [940000], rate=50177.94/min [950000], rate=50308.91/min [960000], rate=50437.83/min [970000], rate=50564.73/min [980000], rate=50821.09/min [990000], rate=51030.93/min [1000000], rate=51194.54/min [1010000], rate=51355.93/min [1020000], rate=51558.55/min [1030000], rate=51201.33/min [1040000], rate=50731.71/min [1050000], rate=50400.00/min [1060000], rate=50039.34/min [1070000], rate=49613.60/min [1080000], rate=49390.24/min [1090000], rate=49620.64/min [1100000], rate=49327.35/min [1110000], rate=49115.04/min [1120000], rate=48908.30/min [1130000], rate=48706.90/min [1140000], rate=48545.07/min [1150000], rate=48421.05/min [1160000], rate=48366.92/min [1170000], rate=48280.61/min [1180000], rate=48261.76/min [1190000], rate=48145.65/min [1200000], rate=47587.57/min [1210000], rate=47575.36/min [1220000], rate=47563.35/min [1230000], rate=47490.35/min [1240000], rate=47448.98/min [1250000], rate=47468.35/min [1260000], rate=47398.12/min [1270000], rate=47417.55/min [1280000], rate=47495.36/min [1290000], rate=47513.81/min [1300000], rate=47560.98/min [1310000], rate=47521.16/min [1320000], rate=47539.02/min [1330000], rate=47528.29/min [1340000], rate=47573.96/min [1350000], rate=47675.10/min [1360000], rate=47691.41/min [1370000], rate=47735.19/min [1380000], rate=47750.87/min [1390000], rate=47793.70/min [1400000], rate=47781.57/min [1410000], rate=47850.68/min [1420000], rate=47865.17/min [1430000], rate=47852.76/min [1440000], rate=47920.13/min [1450000], rate=47933.88/min [1460000], rate=47973.71/min [1470000], rate=48013.06/min [1480000], rate=48051.95/min [1490000], rate=48142.16/min [1500000], rate=48231.51/min [1510000], rate=48345.78/min [1520000], rate=48433.35/min [1530000], rate=48571.43/min [1540000], rate=48682.82/min [1550000], rate=48793.28/min [1560000], rate=48877.28/min [1570000], rate=49011.45/min [1580000], rate=49119.17/min [1590000], rate=49226.01/min [1600000], rate=49357.33/min [1610000], rate=49462.37/min [1620000], rate=48991.94/min [1630000], rate=48511.90/min [1640000], rate=47953.22/min [1650000], rate=47596.15/min [1660000], rate=47181.43/min [1670000], rate=46604.65/min [1680000], rate=46323.53/min [1690000], rate=46132.85/min [1700000], rate=45925.26/min [1710000], rate=45803.57/min [1720000], rate=45583.04/min [1730000], rate=45466.49/min [1740000], rate=45292.84/min [1750000], rate=45122.48/min [1760000], rate=45012.79/min [1770000], rate=44923.86/min [1780000], rate=44836.27/min [1790000], rate=44750.00/min [1800000], rate=44628.10/min [1810000], rate=44544.71/min [1820000], rate=44480.65/min [1830000], rate=44435.45/min [1840000], rate=44390.83/min [1850000], rate=44329.07/min [1860000], rate=44285.71/min [1870000], rate=44277.82/min [1880000], rate=44287.40/min [1890000], rate=44314.19/min [1900000], rate=44306.26/min [1910000], rate=44315.55/min [1920000], rate=44341.80/min [1930000], rate=44401.84/min [1940000], rate=44444.44/min [1950000], rate=44469.78/min [1960000], rate=44528.59/min [1970000], rate=44603.77/min [1980000], rate=44661.65/min [1990000], rate=44735.86/min [2000000], rate=44826.30/min [2010000], rate=44916.20/min [2020000], rate=45005.57/min [2030000], rate=45111.11/min [2040000], rate=45199.41/min [2050000], rate=45287.19/min [2060000], rate=45391.11/min [2070000], rate=45477.85/min [2080000], rate=45530.83/min [2090000], rate=45583.42/min [2100000], rate=45635.64/min [2110000], rate=45803.18/min [2120000], rate=45970.37/min [2130000], rate=46037.46/min [2140000], rate=46104.13/min [2150000], rate=46153.85/min [2160000], rate=46236.18/min [2170000], rate=46318.04/min [2180000], rate=46399.43/min [2190000], rate=46480.37/min [2200000], rate=46560.85/min [2210000], rate=46657.28/min [2220000], rate=46411.15/min [2230000], rate=46122.03/min [2240000], rate=45839.02/min [2250000], rate=45669.82/min [2260000], rate=45457.59/min [2270000], rate=45279.26/min [2280000], rate=45118.73/min [2290000], rate=44960.73/min [2300000], rate=44848.88/min [2310000], rate=44752.99/min [2320000], rate=44672.66/min [2330000], rate=44593.30/min [2340000], rate=44514.90/min [2350000], rate=44423.44/min [2360000], rate=44402.63/min [2370000], rate=44340.51/min [2380000], rate=44320.30/min [2390000], rate=44204.69/min [2400000], rate=44171.78/min [2410000], rate=44139.19/min [2420000], rate=44013.34/min [2430000], rate=44008.45/min [2440000], rate=43977.17/min [2450000], rate=43946.19/min [2460000], rate=43954.73/min [2470000], rate=43963.22/min [2480000], rate=43971.63/min -building interval tree based on /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=75000.00/min [30000], rate=81818.18/min [40000], rate=85714.29/min [50000], rate=103448.28/min [60000], rate=116129.03/min [70000], rate=107692.31/min [80000], rate=104347.83/min [90000], rate=108000.00/min [100000], rate=107142.86/min [110000], rate=110000.00/min [120000], rate=118032.79/min [130000], rate=127868.85/min [140000], rate=121739.13/min [150000], rate=116883.12/min [160000], rate=114285.71/min [170000], rate=112087.91/min [180000], rate=118681.32/min [190000], rate=122580.65/min [200000], rate=120000.00/min [210000], rate=117757.01/min [220000], rate=117857.14/min [230000], rate=116949.15/min [240000], rate=118032.79/min [250000], rate=122950.82/min [260000], rate=126829.27/min [270000], rate=123664.12/min [280000], rate=120863.31/min [290000], rate=118367.35/min [300000], rate=121621.62/min [310000], rate=120779.22/min [320000], rate=119254.66/min [330000], rate=122981.37/min [340000], rate=125153.37/min [350000], rate=124260.36/min [360000], rate=122727.27/min [370000], rate=123333.33/min [380000], rate=123243.24/min [390000], rate=123157.89/min [400000], rate=122448.98/min [410000], rate=121182.27/min [420000], rate=120000.00/min [430000], rate=122274.88/min [440000], rate=122790.70/min [450000], rate=121621.62/min [460000], rate=123214.29/min [470000], rate=125333.33/min [480000], rate=124675.32/min [490000], rate=124050.63/min [500000], rate=123966.94/min [510000], rate=123886.64/min [520000], rate=123320.16/min [530000], rate=118215.61/min [540000], rate=101567.40/min [550000], rate=85937.50/min [560000], rate=74832.96/min [570000], rate=67992.05/min [580000], rate=61811.72/min [590000], rate=56190.48/min [600000], rate=51355.21/min [610000], rate=48157.89/min [620000], rate=46268.66/min [630000], rate=43448.28/min [640000], rate=41739.13/min [650000], rate=38690.48/min [660000], rate=36734.69/min [670000], rate=35449.74/min [680000], rate=33774.83/min [690000], rate=32753.16/min [700000], rate=32134.66/min [710000], rate=31720.03/min [720000], rate=31101.51/min [730000], rate=30437.80/min [740000], rate=29718.88/min [750000], rate=29277.81/min [760000], rate=28934.01/min [770000], rate=28553.77/min [780000], rate=28125.00/min [790000], rate=27735.52/min [800000], rate=27428.57/min [810000], rate=27105.41/min [820000], rate=26826.61/min [830000], rate=26574.17/min [840000], rate=26387.43/min [850000], rate=26140.44/min [860000], rate=25968.80/min [870000], rate=25663.72/min [880000], rate=25299.47/min [890000], rate=25141.24/min [900000], rate=25081.28/min [910000], rate=25068.87/min [920000], rate=25068.12/min [930000], rate=25089.93/min [940000], rate=25100.13/min [950000], rate=25099.08/min [960000], rate=25043.48/min [970000], rate=25032.26/min [980000], rate=25042.59/min [990000], rate=25031.61/min [1000000], rate=25031.29/min [1010000], rate=25072.40/min [1020000], rate=25123.15/min [1030000], rate=25162.87/min [1040000], rate=25222.31/min [1050000], rate=25280.90/min [1060000], rate=25338.65/min [1070000], rate=25365.47/min [1080000], rate=25421.73/min [1090000], rate=25467.29/min [1100000], rate=25482.63/min [1110000], rate=25556.41/min [1120000], rate=25639.07/min [1130000], rate=25691.55/min [1140000], rate=25753.01/min [1150000], rate=25823.35/min [1160000], rate=25883.23/min [1170000], rate=25942.35/min [1180000], rate=26000.73/min [1190000], rate=26086.96/min [1200000], rate=26172.30/min [1210000], rate=26266.28/min [1220000], rate=26368.88/min [1230000], rate=26470.59/min [1240000], rate=26571.43/min [1250000], rate=26671.41/min [1260000], rate=26770.54/min [1270000], rate=26878.31/min [1280000], rate=26975.76/min [1290000], rate=27081.88/min [1300000], rate=27196.65/min [1310000], rate=27310.63/min [1320000], rate=27423.82/min [1330000], rate=27536.23/min [1340000], rate=27666.90/min [1350000], rate=27796.84/min [1360000], rate=27916.52/min [1370000], rate=28054.61/min [1380000], rate=28182.44/min [1390000], rate=28309.57/min [1400000], rate=28436.02/min [1410000], rate=28571.43/min [1420000], rate=28715.87/min [1430000], rate=28811.28/min [1440000], rate=28877.01/min [1450000], rate=28942.12/min [1460000], rate=29006.62/min [1470000], rate=29089.71/min [1480000], rate=29172.14/min [1490000], rate=29244.36/min [1500000], rate=29325.51/min [1510000], rate=29415.58/min [1520000], rate=29505.01/min [1530000], rate=29603.35/min [1540000], rate=29720.17/min [1550000], rate=29826.81/min [1560000], rate=29923.27/min [1570000], rate=30019.12/min [1580000], rate=30114.36/min [1590000], rate=30218.56/min [1600000], rate=30322.17/min [1610000], rate=30444.37/min [1620000], rate=30546.83/min [1630000], rate=30658.31/min [1640000], rate=30759.61/min [1650000], rate=30869.97/min [1660000], rate=30999.07/min [1670000], rate=31098.70/min [1680000], rate=31217.10/min [1690000], rate=31334.98/min [1700000], rate=31423.29/min [1710000], rate=31540.12/min [1720000], rate=31656.44/min [1730000], rate=31752.83/min [1740000], rate=31848.69/min [1750000], rate=31963.47/min [1760000], rate=31990.31/min [1770000], rate=31978.32/min [1780000], rate=31995.21/min [1790000], rate=32011.92/min [1800000], rate=32056.99/min [1810000], rate=32092.20/min [1820000], rate=32127.10/min [1830000], rate=32171.11/min [1840000], rate=32224.17/min [1850000], rate=32248.69/min [1860000], rate=32301.01/min [1870000], rate=32343.61/min [1880000], rate=32376.58/min [1890000], rate=32400.00/min [1900000], rate=32423.21/min [1910000], rate=32455.40/min [1920000], rate=32514.82/min [1930000], rate=32564.68/min [1940000], rate=32614.18/min [1950000], rate=32663.32/min [1960000], rate=32721.20/min [1970000], rate=32778.70/min [1980000], rate=32835.82/min [1990000], rate=32901.63/min [2000000], rate=32957.98/min [2010000], rate=33013.96/min [2020000], rate=33069.58/min [2030000], rate=33124.83/min [2040000], rate=33197.72/min [2050000], rate=33261.22/min [2060000], rate=33324.35/min [2070000], rate=33405.06/min [2080000], rate=33485.38/min [2090000], rate=33583.29/min [2100000], rate=33662.84/min [2110000], rate=33733.01/min [2120000], rate=33820.79/min [2130000], rate=33899.20/min [2140000], rate=34013.25/min [2150000], rate=34136.01/min [2160000], rate=34249.47/min [2170000], rate=34335.44/min [2180000], rate=34421.05/min [2190000], rate=34515.37/min [2200000], rate=34609.33/min [2210000], rate=34693.88/min [2220000], rate=34787.15/min [2230000], rate=34889.18/min [2240000], rate=34981.78/min [2250000], rate=35083.16/min [2260000], rate=35184.22/min [2270000], rate=35321.58/min [2280000], rate=35431.24/min [2290000], rate=35458.06/min [2300000], rate=35484.70/min [2310000], rate=35502.05/min [2320000], rate=35519.27/min [2330000], rate=35545.39/min [2340000], rate=35589.35/min [2350000], rate=35633.06/min [2360000], rate=35676.49/min [2370000], rate=35719.67/min [2380000], rate=35762.58/min [2390000], rate=35805.24/min [2400000], rate=35838.73/min [2410000], rate=35871.99/min [2420000], rate=35913.93/min [2430000], rate=35973.35/min [2440000], rate=36023.62/min [2450000], rate=36064.77/min [2460000], rate=36114.51/min [2470000], rate=36155.16/min [2480000], rate=36204.38/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir --filt_file /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 9000000.00 reads per min processed... 7000000.00 reads per min processed... 6857142.86 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5538461.54 reads per min processed... 5571428.57 reads per min processed... 5600000.00 reads per min processed... 5294117.65 reads per min processed... 5333333.33 reads per min processed... 5368421.05 reads per min processed... 5142857.14 reads per min processed... 5181818.18 reads per min processed... 5000000.00 reads per min processed... 5040000.00 reads per min processed... 5076923.08 reads per min processed... 4928571.43 reads per min processed... 4965517.24 reads per min processed... 4838709.68 reads per min processed... 4875000.00 reads per min processed... 4764705.88 reads per min processed... 4800000.00 reads per min processed... 4833333.33 reads per min processed... 4736842.11 reads per min processed... 4769230.77 reads per min processed... 4682926.83 reads per min processed... 4714285.71 reads per min processed... 4744186.05 reads per min processed... 4666666.67 reads per min processed... 4695652.17 reads per min processed... 4723404.26 reads per min processed... 4653061.22 reads per min processed... 4680000.00 reads per min processed... 4705882.35 reads per min processed... 4641509.43 reads per min processed... 4666666.67 reads per min processed... 4777777.78 reads per min processed... 4800000.00 reads per min processed... 4909090.91 reads per min processed... 4928571.43 reads per min processed... 4947368.42 reads per min processed... 4965517.24 reads per min processed... 4900000.00 reads per min processed... 4918032.79 reads per min processed... 4857142.86 reads per min processed... 4875000.00 reads per min processed... 4892307.69 reads per min processed... 4909090.91 reads per min processed... 4925373.13 reads per min processed... 4869565.22 reads per min processed... 4885714.29 reads per min processed... 4901408.45 reads per min processed... 4849315.07 reads per min processed... 4864864.86 reads per min processed... 4880000.00 reads per min processed... 4831168.83 reads per min processed... 4846153.85 reads per min processed... 4860759.49 reads per min processed... 4875000.00 reads per min processed... 4829268.29 reads per min processed... 4843373.49 reads per min processed... 4857142.86 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.rSZoNQaZbp/A673_FFPE_RNA_0001_B23LG7FLT4_3.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -1243631.175778 EM: Round [1] log likelihood: -1243163.136457 EM: Round [2] log likelihood: -1243025.622463 EM: Round [3] log likelihood: -1242964.485306 EM: Round [4] log likelihood: -1242932.201462 EM: Round [5] log likelihood: -1242913.630526 EM: Round [6] log likelihood: -1242902.250477 EM: Round [7] log likelihood: -1242894.880429 EM: Round [8] log likelihood: -1242889.861436 EM: Round [9] log likelihood: -1242886.285928 EM: Round [10] log likelihood: -1242883.636395 EM: Round [11] log likelihood: -1242881.605869 EM: Round [12] log likelihood: -1242880.005080 EM: Round [13] log likelihood: -1242878.712842 EM: Round [14] log likelihood: -1242877.648753 EM: Round [15] log likelihood: -1242876.757706 EM: Round [16] log likelihood: -1242876.000819 EM: Round [17] log likelihood: -1242875.349955 EM: Round [18] log likelihood: -1242874.784291 EM: Round [19] log likelihood: -1242874.288116 EM: Round [20] log likelihood: -1242873.849367 EM: Round [21] log likelihood: -1242873.458639 EM: Round [22] log likelihood: -1242873.108496 EM: Round [23] log likelihood: -1242872.792983 EM: Round [24] log likelihood: -1242872.507273 EM: Round [25] log likelihood: -1242872.247416 EM: Round [26] log likelihood: -1242872.010143 EM: Round [27] log likelihood: -1242871.792722 EM: Round [28] log likelihood: -1242871.592858 EM: Round [29] log likelihood: -1242871.408600 EM: Round [30] log likelihood: -1242871.238282 EM: Round [31] log likelihood: -1242871.080468 EM: Round [32] log likelihood: -1242870.933918 EM: Round [33] log likelihood: -1242870.797550 EM: Round [34] log likelihood: -1242870.670418 EM: Round [35] log likelihood: -1242870.551689 EM: Round [36] log likelihood: -1242870.440626 EM: Round [37] log likelihood: -1242870.336578 EM: Round [38] log likelihood: -1242870.238961 EM: Round [39] log likelihood: -1242870.147257 EM: Round [40] log likelihood: -1242870.060999 EM: Round [41] log likelihood: -1242869.979766 EM: Round [42] log likelihood: -1242869.903180 EM: Round [43] log likelihood: -1242869.830898 EM: Round [44] log likelihood: -1242869.762608 EM: Round [45] log likelihood: -1242869.698029 EM: Round [46] log likelihood: -1242869.636902 EM: Round [47] log likelihood: -1242869.578991 EM: Round [48] log likelihood: -1242869.524081 EM: Round [49] log likelihood: -1242869.471974 EM: Round [50] log likelihood: -1242869.422488 EM: Round [51] log likelihood: -1242869.375457 EM: Round [52] log likelihood: -1242869.330727 EM: Round [53] log likelihood: -1242869.288154 EM: Round [54] log likelihood: -1242869.247609 EM: Round [55] log likelihood: -1242869.208968 EM: Round [56] log likelihood: -1242869.172120 EM: Round [57] log likelihood: -1242869.136960 EM: Round [58] log likelihood: -1242869.103390 EM: Round [59] log likelihood: -1242869.071321 EM: Round [60] log likelihood: -1242869.040668 EM: Round [61] log likelihood: -1242869.011352 EM: Round [62] log likelihood: -1242868.983300 EM: Round [63] log likelihood: -1242868.956445 EM: Round [64] log likelihood: -1242868.930721 EM: Round [65] log likelihood: -1242868.906069 EM: Round [66] log likelihood: -1242868.882434 EM: Round [67] log likelihood: -1242868.859762 EM: Round [68] log likelihood: -1242868.838005 EM: Round [69] log likelihood: -1242868.817116 EM: Round [70] log likelihood: -1242868.797052 EM: Round [71] log likelihood: -1242868.777771 EM: Round [72] log likelihood: -1242868.759236 EM: Round [73] log likelihood: -1242868.741410 EM: Round [74] log likelihood: -1242868.724260 EM: Round [75] log likelihood: -1242868.707753 EM: Round [76] log likelihood: -1242868.691858 EM: Round [77] log likelihood: -1242868.676548 EM: Round [78] log likelihood: -1242868.661795 EM: Round [79] log likelihood: -1242868.647575 EM: Round [80] log likelihood: -1242868.633861 EM: Round [81] log likelihood: -1242868.620633 EM: Round [82] log likelihood: -1242868.607869 EM: Round [83] log likelihood: -1242868.595547 EM: Round [84] log likelihood: -1242868.583649 EM: Round [85] log likelihood: -1242868.572156 EM: Round [86] log likelihood: -1242868.561052 EM: Round [87] log likelihood: -1242868.550319 EM: Round [88] log likelihood: -1242868.539941 EM: Round [89] log likelihood: -1242868.529905 EM: Round [90] log likelihood: -1242868.520195 EM: Round [91] log likelihood: -1242868.510799 EM: Round [92] log likelihood: -1242868.501704 EM: Round [93] log likelihood: -1242868.492898 EM: Round [94] log likelihood: -1242868.484368 EM: Round [95] log likelihood: -1242868.476105 EM: Round [96] log likelihood: -1242868.468097 EM: Round [97] log likelihood: -1242868.460335 EM: Round [98] log likelihood: -1242868.452809 EM: Round [99] log likelihood: -1242868.445510 EM: Round [100] log likelihood: -1242868.438430 EM: Round [101] log likelihood: -1242868.431560 EM: Round [102] log likelihood: -1242868.424893 EM: Round [103] log likelihood: -1242868.418420 EM: Round [104] log likelihood: -1242868.412136 EM: Round [105] log likelihood: -1242868.406032 EM: Round [106] log likelihood: -1242868.400103 EM: Round [107] log likelihood: -1242868.394342 EM: Round [108] log likelihood: -1242868.388743 EM: Round [109] log likelihood: -1242868.383300 EM: Round [110] log likelihood: -1242868.378009 EM: Round [111] log likelihood: -1242868.372864 EM: Round [112] log likelihood: -1242868.367859 EM: Round [113] log likelihood: -1242868.362990 EM: Round [114] log likelihood: -1242868.358252 EM: Round [115] log likelihood: -1242868.353642 EM: Round [116] log likelihood: -1242868.349154 EM: Round [117] log likelihood: -1242868.344785 EM: Round [118] log likelihood: -1242868.340530 EM: Round [119] log likelihood: -1242868.336387 EM: Round [120] log likelihood: -1242868.332351 EM: Round [121] log likelihood: -1242868.328419 EM: Round [122] log likelihood: -1242868.324588 EM: Round [123] log likelihood: -1242868.320854 EM: Round [124] log likelihood: -1242868.317214 EM: Round [125] log likelihood: -1242868.313666 EM: Round [126] log likelihood: -1242868.310207 EM: Round [127] log likelihood: -1242868.306834 EM: Round [128] log likelihood: -1242868.303544 EM: Round [129] log likelihood: -1242868.300335 EM: Round [130] log likelihood: -1242868.297204 EM: Round [131] log likelihood: -1242868.294150 EM: Round [132] log likelihood: -1242868.291169 EM: Round [133] log likelihood: -1242868.288260 EM: Round [134] log likelihood: -1242868.285420 EM: Round [135] log likelihood: -1242868.282648 EM: Round [136] log likelihood: -1242868.279942 EM: Round [137] log likelihood: -1242868.277299 EM: Round [138] log likelihood: -1242868.274719 EM: Round [139] log likelihood: -1242868.272198 EM: Round [140] log likelihood: -1242868.269736 EM: Round [141] log likelihood: -1242868.267331 EM: Round [142] log likelihood: -1242868.264981 EM: Round [143] log likelihood: -1242868.262685 EM: Round [144] log likelihood: -1242868.260441 EM: Round [145] log likelihood: -1242868.258248 EM: Round [146] log likelihood: -1242868.256105 EM: Round [147] log likelihood: -1242868.254010 EM: Round [148] log likelihood: -1242868.251962 EM: Round [149] log likelihood: -1242868.249960 EM: Round [150] log likelihood: -1242868.248002 EM: Round [151] log likelihood: -1242868.246087 EM: Round [152] log likelihood: -1242868.244215 EM: Round [153] log likelihood: -1242868.242384 EM: Round [154] log likelihood: -1242868.240593 EM: Round [155] log likelihood: -1242868.238841 EM: Round [156] log likelihood: -1242868.237127 EM: Round [157] log likelihood: -1242868.235450 EM: Round [158] log likelihood: -1242868.233809 EM: Round [159] log likelihood: -1242868.232204 EM: Round [160] log likelihood: -1242868.230633 EM: Round [161] log likelihood: -1242868.229095 EM: Round [162] log likelihood: -1242868.227591 EM: Round [163] log likelihood: -1242868.226118 EM: Round [164] log likelihood: -1242868.224676 EM: Round [165] log likelihood: -1242868.223265 EM: Round [166] log likelihood: -1242868.221883 EM: Round [167] log likelihood: -1242868.220531 EM: Round [168] log likelihood: -1242868.219206 EM: Round [169] log likelihood: -1242868.217910 EM: Round [170] log likelihood: -1242868.216640 EM: Round [171] log likelihood: -1242868.215397 EM: Round [172] log likelihood: -1242868.214179 EM: Round [173] log likelihood: -1242868.212986 EM: Round [174] log likelihood: -1242868.211818 EM: Round [175] log likelihood: -1242868.210674 EM: Round [176] log likelihood: -1242868.209554 EM: Round [177] log likelihood: -1242868.208456 EM: Round [178] log likelihood: -1242868.207380 EM: Round [179] log likelihood: -1242868.206327 EM: Round [180] log likelihood: -1242868.205295 EM: Round [181] log likelihood: -1242868.204283 EM: Round [182] log likelihood: -1242868.203293 EM: Round [183] log likelihood: -1242868.202322 EM: Round [184] log likelihood: -1242868.201370 EM: Round [185] log likelihood: -1242868.200438 EM: Round [186] log likelihood: -1242868.199524 EM: Round [187] log likelihood: -1242868.198629 EM: Round [188] log likelihood: -1242868.197751 EM: Round [189] log likelihood: -1242868.196891 EM: Round [190] log likelihood: -1242868.196048 EM: Round [191] log likelihood: -1242868.195222 EM: Round [192] log likelihood: -1242868.194412 EM: Round [193] log likelihood: -1242868.193618 EM: Round [194] log likelihood: -1242868.192840 EM: Round [195] log likelihood: -1242868.192077 EM: Round [196] log likelihood: -1242868.191329 EM: Round [197] log likelihood: -1242868.190596 EM: Round [198] log likelihood: -1242868.189877 EM: Round [199] log likelihood: -1242868.189173 EM: Round [200] log likelihood: -1242868.188482 EM: Round [201] log likelihood: -1242868.187804 EM: Round [202] log likelihood: -1242868.187140 EM: Round [203] log likelihood: -1242868.186488 EM: Round [204] log likelihood: -1242868.185850 EM: Round [205] log likelihood: -1242868.185223 EM: Round [206] log likelihood: -1242868.184609 EM: Round [207] log likelihood: -1242868.184007 EM: Round [208] log likelihood: -1242868.183416 EM: Round [209] log likelihood: -1242868.182837 EM: Round [210] log likelihood: -1242868.182269 EM: Round [211] log likelihood: -1242868.181712 EM: Round [212] log likelihood: -1242868.181165 EM: Round [213] log likelihood: -1242868.180629 EM: Round [214] log likelihood: -1242868.180104 EM: Round [215] log likelihood: -1242868.179588 EM: Round [216] log likelihood: -1242868.179082 EM: Round [217] log likelihood: -1242868.178586 EM: Round [218] log likelihood: -1242868.178100 EM: Round [219] log likelihood: -1242868.177622 EM: Round [220] log likelihood: -1242868.177154 EM: Round [221] log likelihood: -1242868.176695 EM: Round [222] log likelihood: -1242868.176244 EM: Round [223] log likelihood: -1242868.175802 EM: Round [224] log likelihood: -1242868.175369 EM: Round [225] log likelihood: -1242868.174944 EM: Round [226] log likelihood: -1242868.174526 EM: Round [227] log likelihood: -1242868.174117 EM: Round [228] log likelihood: -1242868.173715 EM: Round [229] log likelihood: -1242868.173321 EM: Round [230] log likelihood: -1242868.172935 EM: Round [231] log likelihood: -1242868.172555 EM: Round [232] log likelihood: -1242868.172183 EM: Round [233] log likelihood: -1242868.171818 EM: Round [234] log likelihood: -1242868.171460 EM: Round [235] log likelihood: -1242868.171108 EM: Round [236] log likelihood: -1242868.170763 EM: Round [237] log likelihood: -1242868.170425 EM: Round [238] log likelihood: -1242868.170093 EM: Round [239] log likelihood: -1242868.169767 EM: Round [240] log likelihood: -1242868.169447 EM: Round [241] log likelihood: -1242868.169134 EM: Round [242] log likelihood: -1242868.168826 EM: Round [243] log likelihood: -1242868.168524 EM: Round [244] log likelihood: -1242868.168227 EM: Round [245] log likelihood: -1242868.167936 EM: Round [246] log likelihood: -1242868.167651 EM: Round [247] log likelihood: -1242868.167371 EM: Round [248] log likelihood: -1242868.167096 EM: Round [249] log likelihood: -1242868.166826 EM: Round [250] log likelihood: -1242868.166561 EM: Round [251] log likelihood: -1242868.166301 EM: Round [252] log likelihood: -1242868.166047 EM: Round [253] log likelihood: -1242868.165796 EM: Round [254] log likelihood: -1242868.165551 EM: Round [255] log likelihood: -1242868.165310 EM: Round [256] log likelihood: -1242868.165073 EM: Round [257] log likelihood: -1242868.164841 EM: Round [258] log likelihood: -1242868.164613 EM: Round [259] log likelihood: -1242868.164389 EM: Round [260] log likelihood: -1242868.164170 EM: Round [261] log likelihood: -1242868.163955 EM: Round [262] log likelihood: -1242868.163743 EM: Round [263] log likelihood: -1242868.163536 EM: Round [264] log likelihood: -1242868.163332 EM: Round [265] log likelihood: -1242868.163132 EM: Round [266] log likelihood: -1242868.162936 EM: Round [267] log likelihood: -1242868.162743 EM: Round [268] log likelihood: -1242868.162554 EM: Round [269] log likelihood: -1242868.162369 EM: Round [270] log likelihood: -1242868.162187 EM: Round [271] log likelihood: -1242868.162008 EM: Round [272] log likelihood: -1242868.161833 EM: Round [273] log likelihood: -1242868.161660 EM: Round [274] log likelihood: -1242868.161491 EM: Round [275] log likelihood: -1242868.161325 EM: Round [276] log likelihood: -1242868.161163 EM: Round [277] log likelihood: -1242868.161003 EM: Round [278] log likelihood: -1242868.160846 EM: Round [279] log likelihood: -1242868.160692 EM: Round [280] log likelihood: -1242868.160541 EM: Round [281] log likelihood: -1242868.160392 EM: Round [282] log likelihood: -1242868.160246 EM: Round [283] log likelihood: -1242868.160103 EM: Round [284] log likelihood: -1242868.159963 EM: Round [285] log likelihood: -1242868.159825 EM: Round [286] log likelihood: -1242868.159690 EM: Round [287] log likelihood: -1242868.159557 EM: Round [288] log likelihood: -1242868.159427 EM: Round [289] log likelihood: -1242868.159299 EM: Round [290] log likelihood: -1242868.159173 EM: Round [291] log likelihood: -1242868.159050 EM: Round [292] log likelihood: -1242868.158929 EM: Round [293] log likelihood: -1242868.158810 EM: Round [294] log likelihood: -1242868.158693 EM: Round [295] log likelihood: -1242868.158579 EM: Round [296] log likelihood: -1242868.158466 EM: Round [297] log likelihood: -1242868.158356 EM: Round [298] log likelihood: -1242868.158248 EM: Round [299] log likelihood: -1242868.158141 EM: Round [300] log likelihood: -1242868.158037 EM: Round [301] log likelihood: -1242868.157934 EM: Round [302] log likelihood: -1242868.157834 EM: Round [303] log likelihood: -1242868.157735 EM: Stopping iterations at round 303 due to insufficient improvement in likelihood. EM: Starting log likelihood: -1241338.461921 EM: Round [1] log likelihood: -1240962.509857 EM: Round [2] log likelihood: -1240855.169796 EM: Round [3] log likelihood: -1240808.353475 EM: Round [4] log likelihood: -1240784.039982 EM: Round [5] log likelihood: -1240770.338282 EM: Round [6] log likelihood: -1240762.147278 EM: Round [7] log likelihood: -1240756.991316 EM: Round [8] log likelihood: -1240753.586578 EM: Round [9] log likelihood: -1240751.236042 EM: Round [10] log likelihood: -1240749.546533 EM: Round [11] log likelihood: -1240748.288165 EM: Round [12] log likelihood: -1240747.321637 EM: Round [13] log likelihood: -1240746.559472 EM: Round [14] log likelihood: -1240745.944804 EM: Round [15] log likelihood: -1240745.439451 EM: Round [16] log likelihood: -1240745.017014 EM: Round [17] log likelihood: -1240744.658763 EM: Round [18] log likelihood: -1240744.351097 EM: Round [19] log likelihood: -1240744.083942 EM: Round [20] log likelihood: -1240743.849698 EM: Round [21] log likelihood: -1240743.642537 EM: Round [22] log likelihood: -1240743.457930 EM: Round [23] log likelihood: -1240743.292303 EM: Round [24] log likelihood: -1240743.142807 EM: Round [25] log likelihood: -1240743.007141 EM: Round [26] log likelihood: -1240742.883429 EM: Round [27] log likelihood: -1240742.770125 EM: Round [28] log likelihood: -1240742.665946 EM: Round [29] log likelihood: -1240742.569814 EM: Round [30] log likelihood: -1240742.480820 EM: Round [31] log likelihood: -1240742.398191 EM: Round [32] log likelihood: -1240742.321264 EM: Round [33] log likelihood: -1240742.249466 EM: Round [34] log likelihood: -1240742.182303 EM: Round [35] log likelihood: -1240742.119342 EM: Round [36] log likelihood: -1240742.060204 EM: Round [37] log likelihood: -1240742.004555 EM: Round [38] log likelihood: -1240741.952100 EM: Round [39] log likelihood: -1240741.902578 EM: Round [40] log likelihood: -1240741.855754 EM: Round [41] log likelihood: -1240741.811419 EM: Round [42] log likelihood: -1240741.769386 EM: Round [43] log likelihood: -1240741.729485 EM: Round [44] log likelihood: -1240741.691563 EM: Round [45] log likelihood: -1240741.655483 EM: Round [46] log likelihood: -1240741.621119 EM: Round [47] log likelihood: -1240741.588356 EM: Round [48] log likelihood: -1240741.557089 EM: Round [49] log likelihood: -1240741.527224 EM: Round [50] log likelihood: -1240741.498672 EM: Round [51] log likelihood: -1240741.471354 EM: Round [52] log likelihood: -1240741.445195 EM: Round [53] log likelihood: -1240741.420128 EM: Round [54] log likelihood: -1240741.396088 EM: Round [55] log likelihood: -1240741.373019 EM: Round [56] log likelihood: -1240741.350866 EM: Round [57] log likelihood: -1240741.329579 EM: Round [58] log likelihood: -1240741.309112 EM: Round [59] log likelihood: -1240741.289422 EM: Round [60] log likelihood: -1240741.270467 EM: Round [61] log likelihood: -1240741.252212 EM: Round [62] log likelihood: -1240741.234620 EM: Round [63] log likelihood: -1240741.217658 EM: Round [64] log likelihood: -1240741.201297 EM: Round [65] log likelihood: -1240741.185508 EM: Round [66] log likelihood: -1240741.170263 EM: Round [67] log likelihood: -1240741.155537 EM: Round [68] log likelihood: -1240741.141306 EM: Round [69] log likelihood: -1240741.127548 EM: Round [70] log likelihood: -1240741.114242 EM: Round [71] log likelihood: -1240741.101368 EM: Round [72] log likelihood: -1240741.088908 EM: Round [73] log likelihood: -1240741.076843 EM: Round [74] log likelihood: -1240741.065157 EM: Round [75] log likelihood: -1240741.053834 EM: Round [76] log likelihood: -1240741.042859 EM: Round [77] log likelihood: -1240741.032218 EM: Round [78] log likelihood: -1240741.021898 EM: Round [79] log likelihood: -1240741.011885 EM: Round [80] log likelihood: -1240741.002169 EM: Round [81] log likelihood: -1240740.992736 EM: Round [82] log likelihood: -1240740.983577 EM: Round [83] log likelihood: -1240740.974681 EM: Round [84] log likelihood: -1240740.966039 EM: Round [85] log likelihood: -1240740.957640 EM: Round [86] log likelihood: -1240740.949476 EM: Round [87] log likelihood: -1240740.941539 EM: Round [88] log likelihood: -1240740.933820 EM: Round [89] log likelihood: -1240740.926311 EM: Round [90] log likelihood: -1240740.919006 EM: Round [91] log likelihood: -1240740.911896 EM: Round [92] log likelihood: -1240740.904977 EM: Round [93] log likelihood: -1240740.898240 EM: Round [94] log likelihood: -1240740.891680 EM: Round [95] log likelihood: -1240740.885290 EM: Round [96] log likelihood: -1240740.879066 EM: Round [97] log likelihood: -1240740.873002 EM: Round [98] log likelihood: -1240740.867093 EM: Round [99] log likelihood: -1240740.861333 EM: Round [100] log likelihood: -1240740.855718 EM: Round [101] log likelihood: -1240740.850244 EM: Round [102] log likelihood: -1240740.844906 EM: Round [103] log likelihood: -1240740.839699 EM: Round [104] log likelihood: -1240740.834620 EM: Round [105] log likelihood: -1240740.829665 EM: Round [106] log likelihood: -1240740.824830 EM: Round [107] log likelihood: -1240740.820112 EM: Round [108] log likelihood: -1240740.815507 EM: Round [109] log likelihood: -1240740.811011 EM: Round [110] log likelihood: -1240740.806622 EM: Round [111] log likelihood: -1240740.802337 EM: Round [112] log likelihood: -1240740.798152 EM: Round [113] log likelihood: -1240740.794065 EM: Round [114] log likelihood: -1240740.790072 EM: Round [115] log likelihood: -1240740.786172 EM: Round [116] log likelihood: -1240740.782361 EM: Round [117] log likelihood: -1240740.778638 EM: Round [118] log likelihood: -1240740.775000 EM: Round [119] log likelihood: -1240740.771444 EM: Round [120] log likelihood: -1240740.767968 EM: Round [121] log likelihood: -1240740.764570 EM: Round [122] log likelihood: -1240740.761248 EM: Round [123] log likelihood: -1240740.758001 EM: Round [124] log likelihood: -1240740.754825 EM: Round [125] log likelihood: -1240740.751720 EM: Round [126] log likelihood: -1240740.748683 EM: Round [127] log likelihood: -1240740.745712 EM: Round [128] log likelihood: -1240740.742807 EM: Round [129] log likelihood: -1240740.739964 EM: Round [130] log likelihood: -1240740.737184 EM: Round [131] log likelihood: -1240740.734463 EM: Round [132] log likelihood: -1240740.731801 EM: Round [133] log likelihood: -1240740.729196 EM: Round [134] log likelihood: -1240740.726647 EM: Round [135] log likelihood: -1240740.724152 EM: Round [136] log likelihood: -1240740.721710 EM: Round [137] log likelihood: -1240740.719320 EM: Round [138] log likelihood: -1240740.716981 EM: Round [139] log likelihood: -1240740.714690 EM: Round [140] log likelihood: -1240740.712448 EM: Round [141] log likelihood: -1240740.710253 EM: Round [142] log likelihood: -1240740.708103 EM: Round [143] log likelihood: -1240740.705998 EM: Round [144] log likelihood: -1240740.703937 EM: Round [145] log likelihood: -1240740.701919 EM: Round [146] log likelihood: -1240740.699942 EM: Round [147] log likelihood: -1240740.698006 EM: Round [148] log likelihood: -1240740.696110 EM: Round [149] log likelihood: -1240740.694253 EM: Round [150] log likelihood: -1240740.692434 EM: Round [151] log likelihood: -1240740.690651 EM: Round [152] log likelihood: -1240740.688905 EM: Round [153] log likelihood: -1240740.687195 EM: Round [154] log likelihood: -1240740.685519 EM: Round [155] log likelihood: -1240740.683877 EM: Round [156] log likelihood: -1240740.682268 EM: Round [157] log likelihood: -1240740.680692 EM: Round [158] log likelihood: -1240740.679147 EM: Round [159] log likelihood: -1240740.677634 EM: Round [160] log likelihood: -1240740.676150 EM: Round [161] log likelihood: -1240740.674697 EM: Round [162] log likelihood: -1240740.673272 EM: Round [163] log likelihood: -1240740.671875 EM: Round [164] log likelihood: -1240740.670507 EM: Round [165] log likelihood: -1240740.669165 EM: Round [166] log likelihood: -1240740.667850 EM: Round [167] log likelihood: -1240740.666561 EM: Round [168] log likelihood: -1240740.665298 EM: Round [169] log likelihood: -1240740.664059 EM: Round [170] log likelihood: -1240740.662845 EM: Round [171] log likelihood: -1240740.661655 EM: Round [172] log likelihood: -1240740.660488 EM: Round [173] log likelihood: -1240740.659344 EM: Round [174] log likelihood: -1240740.658222 EM: Round [175] log likelihood: -1240740.657122 EM: Round [176] log likelihood: -1240740.656044 EM: Round [177] log likelihood: -1240740.654987 EM: Round [178] log likelihood: -1240740.653950 EM: Round [179] log likelihood: -1240740.652933 EM: Round [180] log likelihood: -1240740.651937 EM: Round [181] log likelihood: -1240740.650959 EM: Round [182] log likelihood: -1240740.650000 EM: Round [183] log likelihood: -1240740.649060 EM: Round [184] log likelihood: -1240740.648138 EM: Round [185] log likelihood: -1240740.647234 EM: Round [186] log likelihood: -1240740.646347 EM: Round [187] log likelihood: -1240740.645478 EM: Round [188] log likelihood: -1240740.644625 EM: Round [189] log likelihood: -1240740.643788 EM: Round [190] log likelihood: -1240740.642968 EM: Round [191] log likelihood: -1240740.642163 EM: Round [192] log likelihood: -1240740.641374 EM: Round [193] log likelihood: -1240740.640599 EM: Round [194] log likelihood: -1240740.639840 EM: Round [195] log likelihood: -1240740.639095 EM: Round [196] log likelihood: -1240740.638364 EM: Round [197] log likelihood: -1240740.637647 EM: Round [198] log likelihood: -1240740.636944 EM: Round [199] log likelihood: -1240740.636255 EM: Round [200] log likelihood: -1240740.635578 EM: Round [201] log likelihood: -1240740.634914 EM: Round [202] log likelihood: -1240740.634263 EM: Round [203] log likelihood: -1240740.633624 EM: Round [204] log likelihood: -1240740.632997 EM: Round [205] log likelihood: -1240740.632382 EM: Round [206] log likelihood: -1240740.631779 EM: Round [207] log likelihood: -1240740.631187 EM: Round [208] log likelihood: -1240740.630607 EM: Round [209] log likelihood: -1240740.630037 EM: Round [210] log likelihood: -1240740.629478 EM: Round [211] log likelihood: -1240740.628929 EM: Round [212] log likelihood: -1240740.628391 EM: Round [213] log likelihood: -1240740.627863 EM: Round [214] log likelihood: -1240740.627345 EM: Round [215] log likelihood: -1240740.626837 EM: Round [216] log likelihood: -1240740.626338 EM: Round [217] log likelihood: -1240740.625849 EM: Round [218] log likelihood: -1240740.625369 EM: Round [219] log likelihood: -1240740.624898 EM: Round [220] log likelihood: -1240740.624435 EM: Round [221] log likelihood: -1240740.623981 EM: Round [222] log likelihood: -1240740.623536 EM: Round [223] log likelihood: -1240740.623099 EM: Round [224] log likelihood: -1240740.622671 EM: Round [225] log likelihood: -1240740.622250 EM: Round [226] log likelihood: -1240740.621837 EM: Round [227] log likelihood: -1240740.621432 EM: Round [228] log likelihood: -1240740.621035 EM: Round [229] log likelihood: -1240740.620644 EM: Round [230] log likelihood: -1240740.620262 EM: Round [231] log likelihood: -1240740.619886 EM: Round [232] log likelihood: -1240740.619517 EM: Round [233] log likelihood: -1240740.619155 EM: Round [234] log likelihood: -1240740.618800 EM: Round [235] log likelihood: -1240740.618452 EM: Round [236] log likelihood: -1240740.618110 EM: Round [237] log likelihood: -1240740.617774 EM: Round [238] log likelihood: -1240740.617444 EM: Round [239] log likelihood: -1240740.617121 EM: Round [240] log likelihood: -1240740.616804 EM: Round [241] log likelihood: -1240740.616492 EM: Round [242] log likelihood: -1240740.616187 EM: Round [243] log likelihood: -1240740.615887 EM: Round [244] log likelihood: -1240740.615592 EM: Round [245] log likelihood: -1240740.615303 EM: Round [246] log likelihood: -1240740.615020 EM: Round [247] log likelihood: -1240740.614741 EM: Round [248] log likelihood: -1240740.614468 EM: Round [249] log likelihood: -1240740.614200 EM: Round [250] log likelihood: -1240740.613936 EM: Round [251] log likelihood: -1240740.613678 EM: Round [252] log likelihood: -1240740.613424 EM: Round [253] log likelihood: -1240740.613176 EM: Round [254] log likelihood: -1240740.612931 EM: Round [255] log likelihood: -1240740.612691 EM: Round [256] log likelihood: -1240740.612456 EM: Round [257] log likelihood: -1240740.612225 EM: Round [258] log likelihood: -1240740.611998 EM: Round [259] log likelihood: -1240740.611776 EM: Round [260] log likelihood: -1240740.611557 EM: Round [261] log likelihood: -1240740.611343 EM: Round [262] log likelihood: -1240740.611132 EM: Round [263] log likelihood: -1240740.610926 EM: Round [264] log likelihood: -1240740.610723 EM: Round [265] log likelihood: -1240740.610524 EM: Round [266] log likelihood: -1240740.610328 EM: Round [267] log likelihood: -1240740.610136 EM: Round [268] log likelihood: -1240740.609948 EM: Round [269] log likelihood: -1240740.609763 EM: Round [270] log likelihood: -1240740.609582 EM: Round [271] log likelihood: -1240740.609403 EM: Round [272] log likelihood: -1240740.609229 EM: Round [273] log likelihood: -1240740.609057 EM: Round [274] log likelihood: -1240740.608888 EM: Round [275] log likelihood: -1240740.608723 EM: Round [276] log likelihood: -1240740.608561 EM: Round [277] log likelihood: -1240740.608401 EM: Round [278] log likelihood: -1240740.608245 EM: Round [279] log likelihood: -1240740.608091 EM: Round [280] log likelihood: -1240740.607940 EM: Round [281] log likelihood: -1240740.607792 EM: Round [282] log likelihood: -1240740.607647 EM: Round [283] log likelihood: -1240740.607504 EM: Round [284] log likelihood: -1240740.607364 EM: Round [285] log likelihood: -1240740.607227 EM: Round [286] log likelihood: -1240740.607092 EM: Round [287] log likelihood: -1240740.606959 EM: Round [288] log likelihood: -1240740.606829 EM: Round [289] log likelihood: -1240740.606702 EM: Round [290] log likelihood: -1240740.606576 EM: Round [291] log likelihood: -1240740.606453 EM: Round [292] log likelihood: -1240740.606332 EM: Round [293] log likelihood: -1240740.606214 EM: Round [294] log likelihood: -1240740.606097 EM: Round [295] log likelihood: -1240740.605983 EM: Round [296] log likelihood: -1240740.605871 EM: Round [297] log likelihood: -1240740.605761 EM: Round [298] log likelihood: -1240740.605652 EM: Round [299] log likelihood: -1240740.605546 EM: Round [300] log likelihood: -1240740.605442 EM: Round [301] log likelihood: -1240740.605340 EM: Round [302] log likelihood: -1240740.605239 EM: Round [303] log likelihood: -1240740.605140 EM: Stopping iterations at round 303 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295197448 > /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir > /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir --annotate /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir -done, see /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1730, filtered: 7534) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.rSZoNQaZbp/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.rSZoNQaZbp/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000248121.8] WARNING, no entry stored in dbm for [ENSG00000253554.7] WARNING, no entry stored in dbm for [ENSG00000210082.2] WARNING, no entry stored in dbm for [ENSG00000210082.2] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000233862.7] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000264618.2] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000270816.6] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000214826.5] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000270816.6] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000253203.6] WARNING, no entry stored in dbm for [ENSG00000224458.3] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000233862.7] WARNING, no entry stored in dbm for [ENSG00000288553.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000234825.3] WARNING, no entry stored in dbm for [ENSG00000285887.1] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000236107.10] WARNING, no entry stored in dbm for [ENSG00000223727.6] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000249893.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250742.4] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000272275.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000241741.1] WARNING, no entry stored in dbm for [ENSG00000226448.1] WARNING, no entry stored in dbm for [ENSG00000139239.7] WARNING, no entry stored in dbm for [ENSG00000229727.7] WARNING, no entry stored in dbm for [ENSG00000154608.14] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000233006.8] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [ENSG00000271978.1] WARNING, no entry stored in dbm for [ENSG00000253983.3] WARNING, no entry stored in dbm for [ENSG00000236751.2] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000236088.10] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245651.3] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000231964.1] WARNING, no entry stored in dbm for [ENSG00000275438.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000233031.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000284783.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000273257.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000236204.6] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000232542.1] WARNING, no entry stored in dbm for [ENSG00000257277.2] WARNING, no entry stored in dbm for [ENSG00000269293.3] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000268266.1] WARNING, no entry stored in dbm for [ENSG00000236894.3] WARNING, no entry stored in dbm for [ENSG00000237877.7] WARNING, no entry stored in dbm for [ENSG00000227579.6] WARNING, no entry stored in dbm for [ENSG00000267767.3] WARNING, no entry stored in dbm for [ENSG00000267106.8] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000196922.10] WARNING, no entry 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no entry stored in dbm for [ENSG00000242908.6] WARNING, no entry stored in dbm for [ENSG00000259664.3] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000235531.11] WARNING, no entry stored in dbm for [ENSG00000243023.2] WARNING, no entry stored in dbm for [ENSG00000243498.2] WARNING, no entry stored in dbm for [ENSG00000235706.8] WARNING, no entry stored in dbm for [ENSG00000154874.15] WARNING, no entry stored in dbm for [ENSG00000266365.1] WARNING, no entry stored in dbm for [ENSG00000228121.1] WARNING, no entry stored in dbm for [ENSG00000215506.5] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000254595.1] WARNING, no entry stored in dbm for [ENSG00000277978.1] WARNING, no entry stored in dbm for [ENSG00000267920.1] WARNING, no entry stored in dbm for [ENSG00000254465.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000224966.4] WARNING, no entry stored in dbm for [ENSG00000219642.2] WARNING, no entry stored in dbm for [ENSG00000219642.2] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000167798.17] WARNING, no entry stored in dbm for [ENSG00000248278.1] WARNING, no entry stored in dbm for [ENSG00000277072.5] WARNING, no entry stored in dbm for [ENSG00000254003.1] WARNING, no entry stored in dbm for [ENSG00000270872.2] WARNING, no entry stored in dbm for [ENSG00000255146.1] WARNING, no entry stored in dbm for [ENSG00000228335.1] WARNING, no entry stored in dbm for [ENSG00000282692.1] WARNING, no entry stored in dbm for [ENSG00000249996.1] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000260260.1] WARNING, no entry stored in dbm for [ENSG00000260260.1] WARNING, no entry stored in dbm for [ENSG00000163597.15] WARNING, no entry stored in dbm for [ENSG00000255717.7] WARNING, no entry stored in dbm for [ENSG00000248121.8] WARNING, no entry stored in dbm for [ENSG00000273609.1] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000270332.2] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000235218.2] WARNING, no entry stored in dbm for [ENSG00000234210.1] WARNING, no entry stored in dbm for [ENSG00000232634.1] WARNING, no entry stored in dbm for [ENSG00000244113.1] WARNING, no entry stored in dbm for [ENSG00000279342.2] WARNING, no entry stored in dbm for [ENSG00000244215.2] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000269954.2] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000257060.7] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000204684.4] WARNING, no entry stored in dbm for [ENSG00000262039.1] WARNING, no entry stored in dbm for [ENSG00000241888.2] WARNING, no entry stored in dbm for [ENSG00000237506.3] WARNING, no entry stored in dbm for [ENSG00000259456.4] WARNING, no entry stored in dbm for [ENSG00000230871.1] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000234353.2] WARNING, no entry stored in dbm for [ENSG00000219451.3] WARNING, no entry stored in dbm for [ENSG00000225661.7] WARNING, no entry stored in dbm for [ENSG00000250896.1] WARNING, no entry stored in dbm for [ENSG00000139239.7] WARNING, no entry stored in dbm for [ENSG00000242423.2] WARNING, no entry stored in dbm for [ENSG00000269609.6] WARNING, no entry stored in dbm for [ENSG00000229727.7] WARNING, no entry stored in dbm for [ENSG00000243944.5] WARNING, no entry stored in dbm for [ENSG00000201875.1] WARNING, no entry stored in dbm for [ENSG00000200794.1] WARNING, no entry stored in dbm for [ENSG00000257511.1] WARNING, no entry stored in dbm for [ENSG00000230121.1] WARNING, no entry stored in dbm for [ENSG00000249444.2] WARNING, no entry stored in dbm for [ENSG00000231841.1] WARNING, no entry stored in dbm for [ENSG00000237740.1] WARNING, no entry stored in dbm for [ENSG00000254040.2] WARNING, no entry stored in dbm for [ENSG00000268592.3] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000228714.4] WARNING, no entry stored in dbm for [ENSG00000249936.3] WARNING, no entry stored in dbm for [ENSG00000230876.8] WARNING, no entry stored in dbm for [ENSG00000271937.1] WARNING, no entry stored in dbm for [ENSG00000232956.9] WARNING, no entry stored in dbm for [ENSG00000238263.1] WARNING, no entry stored in dbm for [ENSG00000243323.7] WARNING, no entry stored in dbm for [ENSG00000287583.1] WARNING, no entry stored in dbm for [ENSG00000237054.9] WARNING, no entry stored in dbm for [ENSG00000250842.1] WARNING, no entry stored in dbm for [ENSG00000242156.1] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000279182.1] WARNING, no entry stored in dbm for [ENSG00000267663.1] WARNING, no entry stored in dbm for [ENSG00000260815.3] WARNING, no entry stored in dbm for [ENSG00000214558.4] WARNING, no entry stored in dbm for [ENSG00000225079.2] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000285091.1] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000205746.9] WARNING, no entry stored in dbm for [ENSG00000180764.13] WARNING, no entry stored in dbm for [ENSG00000231084.2] WARNING, no entry stored in dbm for [ENSG00000254418.1] WARNING, no entry stored in dbm for [ENSG00000281649.2] WARNING, no entry stored in dbm for [ENSG00000231976.8] WARNING, no entry stored in dbm for [ENSG00000272630.1] WARNING, no entry stored in dbm for [ENSG00000223891.6] WARNING, no entry stored in dbm for [ENSG00000279182.1] WARNING, no entry stored in dbm for [ENSG00000230411.1] WARNING, no entry stored in dbm for [ENSG00000230426.4] WARNING, no entry stored in dbm for [ENSG00000285887.1] WARNING, no entry stored in dbm for [ENSG00000232377.1] WARNING, no entry stored in dbm for [ENSG00000225377.6] WARNING, no entry stored in dbm for [ENSG00000281903.2] WARNING, no entry stored in dbm for [ENSG00000248008.3] WARNING, no entry stored in dbm for [ENSG00000265630.2] WARNING, no entry stored in dbm for [ENSG00000255213.1] WARNING, no entry stored in dbm for [ENSG00000237859.2] WARNING, no entry stored in dbm for [ENSG00000267652.1] WARNING, no entry stored in dbm for [ENSG00000213239.3] WARNING, no entry stored in dbm for [ENSG00000249673.7] WARNING, no entry stored in dbm for [ENSG00000248092.8] WARNING, no entry stored in dbm for [ENSG00000233762.3] WARNING, no entry stored in dbm for [ENSG00000226425.1] WARNING, no entry stored in dbm for [ENSG00000270883.1] WARNING, no entry stored in dbm for [ENSG00000232729.8] WARNING, no entry stored in dbm for [ENSG00000226970.2] WARNING, no entry stored in dbm for [ENSG00000267858.6] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000279232.2] WARNING, no entry stored in dbm for [ENSG00000235292.2] WARNING, no entry stored in dbm for [ENSG00000234840.2] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000255571.9] WARNING, no entry stored in dbm for [ENSG00000229989.4] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000283117.1] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000260144.1] WARNING, no entry stored in dbm for [ENSG00000286136.2] WARNING, no entry stored in dbm for [ENSG00000235975.1] WARNING, no entry stored in dbm for [ENSG00000253983.3] WARNING, no entry stored in dbm for [ENSG00000235448.3] WARNING, no entry stored in dbm for [ENSG00000237463.6] WARNING, no entry stored in dbm for [ENSG00000266504.1] WARNING, no entry stored in dbm for [ENSG00000257150.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000250303.4] WARNING, no entry stored in dbm for [ENSG00000285737.1] WARNING, no entry stored in dbm for [ENSG00000230109.1] WARNING, no entry stored in dbm for [ENSG00000233431.1] WARNING, no entry stored in dbm for [ENSG00000269604.1] WARNING, no entry stored in dbm for [ENSG00000260239.2] WARNING, no entry stored in dbm for [ENSG00000257771.6] WARNING, no entry stored in dbm for [ENSG00000257056.3] WARNING, no entry stored in dbm for [ENSG00000234634.2] WARNING, no entry stored in dbm for [ENSG00000226320.6] WARNING, no entry stored in dbm for [ENSG00000257582.5] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000230317.2] WARNING, no entry stored in dbm for [ENSG00000230426.4] WARNING, no entry stored in dbm for [ENSG00000235703.6] WARNING, no entry stored in dbm for [ENSG00000277147.6] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000272556.2] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000261097.1] WARNING, no entry stored in dbm for [ENSG00000256971.2] WARNING, no entry stored in dbm for [ENSG00000227674.3] WARNING, no entry stored in dbm for [ENSG00000227674.3] WARNING, no entry stored in dbm for [ENSG00000277142.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000226380.9] WARNING, no entry stored in dbm for [ENSG00000224714.3] WARNING, no entry stored in dbm for [ENSG00000266820.1] WARNING, no entry stored in dbm for [ENSG00000263647.1] WARNING, no entry stored in dbm for [ENSG00000244383.2] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000286349.1] WARNING, no entry stored in dbm for [ENSG00000279488.1] WARNING, no entry stored in dbm for [ENSG00000226965.2] WARNING, no entry stored in dbm for [ENSG00000227145.2] WARNING, no entry stored in dbm for [ENSG00000213430.6] WARNING, no entry stored in dbm for [ENSG00000183199.6] WARNING, no entry stored in dbm for [ENSG00000259917.1] WARNING, no entry stored in dbm for [ENSG00000230946.3] WARNING, no entry stored in dbm for [ENSG00000240651.1] WARNING, no entry stored in dbm for [ENSG00000231074.9] WARNING, no entry stored in dbm for [ENSG00000251102.1] WARNING, no entry stored in dbm for [ENSG00000250494.1] WARNING, no entry stored in dbm for [ENSG00000286035.1] WARNING, no entry stored in dbm for [ENSG00000248205.1] WARNING, no entry stored in dbm for [ENSG00000218502.3] WARNING, no entry stored in dbm for [ENSG00000237984.3] WARNING, no entry stored in dbm for [ENSG00000258741.4] WARNING, no entry stored in dbm for [ENSG00000258741.4] WARNING, no entry stored in dbm for [ENSG00000224699.9] WARNING, no entry stored in dbm for [ENSG00000261168.1] WARNING, no entry stored in dbm for [ENSG00000280832.1] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000286182.1] WARNING, no entry stored in dbm for [ENSG00000280852.2] WARNING, no entry stored in dbm for [ENSG00000272396.1] WARNING, no entry stored in dbm for [ENSG00000231841.1] WARNING, no entry stored in dbm for [ENSG00000214184.3] WARNING, no entry stored in dbm for [ENSG00000231064.7] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000176826.15] WARNING, no entry stored in dbm for [ENSG00000214391.3] WARNING, no entry stored in dbm for [ENSG00000275340.1] WARNING, no entry stored in dbm for [ENSG00000253438.4] WARNING, no entry stored in dbm for [ENSG00000244026.6] WARNING, no entry stored in dbm for [ENSG00000173295.8] WARNING, no entry stored in dbm for [ENSG00000228868.3] WARNING, no entry stored in dbm for [ENSG00000244383.2] WARNING, no entry stored in dbm for [ENSG00000237571.1] WARNING, no entry stored in dbm for [ENSG00000254661.3] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000286042.1] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000258792.4] WARNING, no entry stored in dbm for [ENSG00000229715.5] WARNING, no entry stored in dbm for [ENSG00000213235.3] WARNING, no entry stored in dbm for [ENSG00000243701.7] WARNING, no entry stored in dbm for [ENSG00000257222.1] WARNING, no entry stored in dbm for [ENSG00000255390.1] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000262001.1] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000261645.7] WARNING, no entry stored in dbm for [ENSG00000237517.10] WARNING, no entry stored in dbm for [ENSG00000228335.1] WARNING, no entry stored in dbm for [ENSG00000261026.1] WARNING, no entry stored in dbm for [ENSG00000233016.7] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000251002.8] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000226101.2] WARNING, no entry stored in dbm for [ENSG00000270445.1] WARNING, no entry stored in dbm for [ENSG00000170089.15] WARNING, no entry stored in dbm for [ENSG00000260455.2] WARNING, no entry stored in dbm for [ENSG00000205054.8] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000279182.1] WARNING, no entry stored in dbm for [ENSG00000232000.3] WARNING, no entry stored in dbm for [ENSG00000232000.3] WARNING, no entry stored in dbm for [ENSG00000227617.9] WARNING, no entry stored in dbm for [ENSG00000154608.14] WARNING, no entry stored in dbm for [ENSG00000241388.5] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000197214.5] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000262468.6] WARNING, no entry stored in dbm for [ENSG00000226054.2] WARNING, no entry stored in dbm for [ENSG00000186312.10] WARNING, no entry stored in dbm for [ENSG00000265342.1] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000236824.2] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000286156.1] WARNING, no entry stored in dbm for [ENSG00000266993.3] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000247679.3] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000255355.1] WARNING, no entry stored in dbm for [ENSG00000253897.2] WARNING, no entry stored in dbm for [ENSG00000226864.2] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000271147.8] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000279285.1] WARNING, no entry stored in dbm for [ENSG00000254590.1] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000254987.1] WARNING, no entry stored in dbm for [ENSG00000255449.1] WARNING, no entry stored in dbm for [ENSG00000240674.1] WARNING, no entry stored in dbm for [ENSG00000254990.5] WARNING, no entry stored in dbm for [ENSG00000276529.1] WARNING, no entry stored in dbm for [ENSG00000265437.1] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000218510.8] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000253816.3] WARNING, no entry stored in dbm for [ENSG00000272911.1] WARNING, no entry stored in dbm for [ENSG00000225975.7] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000254635.6] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000256029.6] WARNING, no entry stored in dbm for [ENSG00000237174.7] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000287811.1] WARNING, no entry stored in dbm for [ENSG00000224251.6] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000226134.1] WARNING, no entry stored in dbm for [ENSG00000232172.1] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000232211.1] WARNING, no entry stored in dbm for [ENSG00000287015.1] WARNING, no entry stored in dbm for [ENSG00000230284.1] WARNING, no entry stored in dbm for [ENSG00000225918.1] WARNING, no entry stored in dbm for [ENSG00000272078.1] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000287449.1] WARNING, no entry stored in dbm for [ENSG00000244471.6] WARNING, no entry stored in dbm for [ENSG00000287167.1] WARNING, no entry stored in dbm for [ENSG00000287346.1] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [ENSG00000287373.1] WARNING, no entry stored in dbm for [ENSG00000286774.1] WARNING, no entry stored in dbm for [ENSG00000219085.1] WARNING, no entry stored in dbm for [ENSG00000233558.1] WARNING, no entry stored in dbm for [ENSG00000220105.2] WARNING, no entry stored in dbm for [ENSG00000274760.1] WARNING, no entry stored in dbm for [ENSG00000283529.1] WARNING, no entry stored in dbm for [ENSG00000231329.8] WARNING, no entry stored in dbm for [ENSG00000231329.8] WARNING, no entry stored in dbm for [ENSG00000231466.2] WARNING, no entry stored in dbm for [ENSG00000286652.1] WARNING, no entry stored in dbm for [ENSG00000225450.1] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000206573.9] WARNING, no entry stored in dbm for [ENSG00000240197.1] WARNING, no entry stored in dbm for [ENSG00000283453.2] WARNING, no entry stored in dbm for [ENSG00000275557.1] WARNING, no entry stored in dbm for [ENSG00000274423.1] WARNING, no entry stored in dbm for [ENSG00000223612.3] WARNING, no entry stored in dbm for [ENSG00000249942.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000275121.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000286406.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000261373.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000251158.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000259704.2] WARNING, no entry stored in dbm for [ENSG00000285948.1] WARNING, no entry stored in dbm for [ENSG00000248122.1] WARNING, no entry stored in dbm for [ENSG00000267852.1] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000235421.1] WARNING, no entry stored in dbm for [ENSG00000263424.1] WARNING, no entry stored in dbm for [ENSG00000237991.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000286136.2] WARNING, no entry stored in dbm for [ENSG00000260293.2] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000275956.1] WARNING, no entry stored in dbm for [ENSG00000250860.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000248749.1] WARNING, no entry stored in dbm for [ENSG00000260144.1] WARNING, no entry stored in dbm for [ENSG00000187012.11] WARNING, no entry stored in dbm for [ENSG00000286436.1] WARNING, no entry stored in dbm for [ENSG00000286833.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000249275.1] WARNING, no entry stored in dbm for [ENSG00000234432.4] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000259363.6] WARNING, no entry stored in dbm for [ENSG00000259347.7] WARNING, no entry stored in dbm for [ENSG00000257095.1] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000272368.2] WARNING, no entry stored in dbm for [ENSG00000242970.2] WARNING, no entry stored in dbm for [ENSG00000279421.1] WARNING, no entry stored in dbm for [ENSG00000287710.1] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000262903.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000226232.8] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000271870.1] WARNING, no entry stored in dbm for [ENSG00000255621.1] WARNING, no entry stored in dbm for [ENSG00000256802.2] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000287646.1] WARNING, no entry stored in dbm for [ENSG00000255074.1] WARNING, no entry stored in dbm for [ENSG00000282393.1] WARNING, no entry stored in dbm for [ENSG00000228363.2] WARNING, no entry stored in dbm for [ENSG00000279261.2] WARNING, no entry stored in dbm for [ENSG00000267109.1] WARNING, no entry stored in dbm for [ENSG00000259349.2] WARNING, no entry stored in dbm for [ENSG00000267383.7] WARNING, no entry stored in dbm for [ENSG00000241281.1] WARNING, no entry stored in dbm for [ENSG00000286721.1] WARNING, no entry stored in dbm for [ENSG00000226266.6] WARNING, no entry stored in dbm for [ENSG00000253880.1] WARNING, no entry stored in dbm for [ENSG00000253880.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000250742.4] WARNING, no entry stored in dbm for [ENSG00000267751.5] WARNING, no entry stored in dbm for [ENSG00000176593.8] WARNING, no entry stored in dbm for [ENSG00000249637.2] WARNING, no entry stored in dbm for [ENSG00000282080.1] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000276232.1] WARNING, no entry stored in dbm for [ENSG00000260107.1] WARNING, no entry stored in dbm for [ENSG00000266897.1] WARNING, no entry stored in dbm for [ENSG00000237251.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000233760.2] WARNING, no entry stored in dbm for [ENSG00000244560.7] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000237813.4] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000212664.5] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000237296.9] * STAR-Fusion complete. See output: /tmp/nxf.rSZoNQaZbp/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)