[W::hts_idx_load3] The index file is older than the data file: 786-O_FFPE_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	317767072
Known Splicing Events:	315384177
Partial Novel Splicing Events:	1635102
Novel Splicing Events:	667750
Filtered Splicing Events:	80043

Total splicing  Junctions:	611346
Known Splicing Junctions:	279813
Partial Novel Splicing Junctions:	183957
Novel Splicing Junctions:	147576

===================================================================
Create BED file ...
Create Interact file ...