.command.out - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (LungN_FFPE_L03_RNA_01_B23LG7FLT4_1)

File Info

Filename: .command.out
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/49f9856e444fc7eb5ea0b91c261534/.command.out
Size: 326 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (LungN_FFPE_L03_RNA_01_B23LG7FLT4_1)
Attempt

Content

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  LungN_FFPE_L03_RNA_01_B23LG7FLT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: LungN_FFPE_L03_RNA_01_B23LG7FLT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated