-ctat genome lib [/tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.8MPK6jhGFh/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary -sample contains 123666762 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir -J /tmp/nxf.8MPK6jhGFh/HeadNeckN_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.8MPK6jhGFh/HeadNeckN_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=100000.00/min [30000], rate=90000.00/min [40000], rate=92307.69/min [50000], rate=96774.19/min [60000], rate=100000.00/min [70000], rate=100000.00/min [80000], rate=104347.83/min [90000], rate=105882.35/min [100000], rate=109090.91/min [110000], rate=110000.00/min [120000], rate=114285.71/min [130000], rate=114705.88/min [140000], rate=118309.86/min [150000], rate=118421.05/min [160000], rate=123076.92/min [170000], rate=129113.92/min [180000], rate=133333.33/min [190000], rate=137349.40/min [200000], rate=144578.31/min [210000], rate=150000.00/min [220000], rate=155294.12/min [230000], rate=158620.69/min [240000], rate=161797.75/min [250000], rate=157894.74/min [260000], rate=157575.76/min [270000], rate=155769.23/min [280000], rate=154128.44/min [290000], rate=153982.30/min [300000], rate=145161.29/min [310000], rate=136764.71/min [320000], rate=131506.85/min [330000], rate=125316.46/min [340000], rate=120000.00/min [350000], rate=114754.10/min [360000], rate=110769.23/min [370000], rate=107246.38/min [380000], rate=104587.16/min [390000], rate=104000.00/min [400000], rate=103896.10/min [410000], rate=103361.34/min [420000], rate=101612.90/min [430000], rate=100000.00/min [440000], rate=98507.46/min [450000], rate=97826.09/min [460000], rate=96503.50/min [470000], rate=95270.27/min [480000], rate=94117.65/min [490000], rate=93630.57/min [500000], rate=92879.26/min [510000], rate=92727.27/min [520000], rate=92307.69/min [530000], rate=92441.86/min [540000], rate=92307.69/min [550000], rate=92436.97/min [560000], rate=92307.69/min [570000], rate=92432.43/min [580000], rate=92553.19/min [590000], rate=92913.39/min [600000], rate=93264.25/min [610000], rate=93367.35/min [620000], rate=93702.77/min [630000], rate=94029.85/min [640000], rate=93658.54/min [650000], rate=92198.58/min [660000], rate=90617.85/min [670000], rate=89333.33/min [680000], rate=88120.95/min [690000], rate=87341.77/min [700000], rate=86419.75/min [710000], rate=85714.29/min [720000], rate=84872.30/min [730000], rate=84230.77/min [740000], rate=84090.91/min [750000], rate=83487.94/min [760000], rate=83363.80/min [770000], rate=83393.50/min [780000], rate=83274.02/min [790000], rate=83157.89/min [800000], rate=83333.33/min [810000], rate=83076.92/min [820000], rate=82550.34/min [830000], rate=82314.05/min [840000], rate=82352.94/min [850000], rate=82258.06/min [860000], rate=82560.00/min [870000], rate=82725.83/min [880000], rate=82758.62/min [890000], rate=83048.21/min [900000], rate=82949.31/min [910000], rate=82852.81/min [920000], rate=82758.62/min [930000], rate=82544.38/min [940000], rate=82335.77/min [950000], rate=82369.94/min [960000], rate=82285.71/min [970000], rate=81971.83/min [980000], rate=82122.91/min [990000], rate=82157.68/min [1000000], rate=82872.93/min [1010000], rate=83356.26/min [1020000], rate=83606.56/min [1030000], rate=83400.81/min [1040000], rate=83422.46/min [1050000], rate=83554.38/min [1060000], rate=83684.21/min [1070000], rate=83921.57/min [1080000], rate=84155.84/min [1090000], rate=84278.35/min [1100000], rate=83756.35/min [1110000], rate=83042.39/min [1120000], rate=83168.32/min [1130000], rate=83292.38/min [1140000], rate=83110.57/min [1150000], rate=83032.49/min [1160000], rate=83054.89/min [1170000], rate=83372.92/min [1180000], rate=83490.57/min [1190000], rate=83606.56/min [1200000], rate=83720.93/min [1210000], rate=83737.02/min [1220000], rate=83848.80/min [1230000], rate=84054.67/min [1240000], rate=84258.21/min [1250000], rate=84459.46/min [1260000], rate=84658.45/min [1270000], rate=84666.67/min [1280000], rate=84955.75/min [1290000], rate=85524.86/min [1300000], rate=86092.72/min [1310000], rate=86659.32/min [1320000], rate=87224.67/min [1330000], rate=87788.78/min [1340000], rate=88448.84/min [1350000], rate=89010.99/min [1360000], rate=89670.33/min [1370000], rate=90329.67/min [1380000], rate=90889.13/min [1390000], rate=91447.37/min [1400000], rate=92105.26/min [1410000], rate=92459.02/min [1420000], rate=92709.47/min [1430000], rate=93260.87/min [1440000], rate=93506.49/min [1450000], rate=93447.91/min [1460000], rate=93489.86/min [1470000], rate=93432.20/min [1480000], rate=93769.80/min [1490000], rate=93907.56/min [1500000], rate=93652.45/min [1510000], rate=93402.06/min [1520000], rate=93538.46/min [1530000], rate=93769.15/min [1540000], rate=93902.44/min [1550000], rate=94416.24/min [1560000], rate=94641.05/min [1570000], rate=94673.37/min [1580000], rate=94705.29/min [1590000], rate=94736.84/min [1600000], rate=94955.49/min [1610000], rate=95360.32/min [1620000], rate=95763.55/min [1630000], rate=96259.84/min [1640000], rate=96755.16/min [1650000], rate=97345.13/min [1660000], rate=97647.06/min [1670000], rate=97660.82/min [1680000], rate=97674.42/min [1690000], rate=97593.84/min [1700000], rate=97328.24/min [1710000], rate=97159.09/min [1720000], rate=97358.49/min [1730000], rate=97648.17/min [1740000], rate=98028.17/min [1750000], rate=98591.55/min [1760000], rate=99061.91/min [1770000], rate=99531.40/min [1780000], rate=99719.89/min [1790000], rate=100280.11/min [1800000], rate=100185.53/min [1810000], rate=100092.17/min [1820000], rate=100275.48/min [1830000], rate=100549.45/min [1840000], rate=100821.92/min [1850000], rate=100725.95/min [1860000], rate=100540.54/min [1870000], rate=100718.13/min [1880000], rate=100624.44/min [1890000], rate=100621.12/min [1900000], rate=100974.31/min [1910000], rate=101326.26/min [1920000], rate=101856.76/min [1930000], rate=102296.82/min [1940000], rate=102736.10/min [1950000], rate=103265.67/min [1960000], rate=103703.70/min [1970000], rate=104232.80/min [1980000], rate=104669.60/min [1990000], rate=105198.24/min [2000000], rate=105633.80/min [2010000], rate=106161.97/min [2020000], rate=106315.79/min [2030000], rate=106561.68/min [2040000], rate=106993.01/min [2050000], rate=107049.61/min [2060000], rate=107012.99/min [2070000], rate=107161.35/min [2080000], rate=107401.03/min [2090000], rate=107639.48/min [2100000], rate=107600.34/min [2110000], rate=107288.14/min [2120000], rate=107432.43/min [2130000], rate=107485.28/min [2140000], rate=107627.83/min [2150000], rate=107949.79/min [2160000], rate=108000.00/min [2170000], rate=107960.20/min [2180000], rate=108188.59/min [2190000], rate=108148.15/min [2200000], rate=108285.48/min [2210000], rate=108510.64/min [2220000], rate=108823.53/min [2230000], rate=109135.40/min [2240000], rate=109535.45/min [2250000], rate=110024.45/min [2260000], rate=110423.45/min [2270000], rate=110731.71/min [2280000], rate=111219.51/min [2290000], rate=111616.57/min [2300000], rate=112103.98/min [2310000], rate=112500.00/min [2320000], rate=112895.38/min [2330000], rate=113382.00/min [2340000], rate=113776.34/min [2350000], rate=114170.04/min [2360000], rate=114655.87/min [2370000], rate=115048.54/min [2380000], rate=115347.33/min [2390000], rate=115831.99/min [2400000], rate=116316.64/min [2410000], rate=116707.02/min [2420000], rate=117002.42/min [2430000], rate=116920.61/min [2440000], rate=116746.41/min [2450000], rate=116574.15/min [2460000], rate=116129.03/min [2470000], rate=115781.25/min [2480000], rate=115797.67/min [2490000], rate=115993.79/min [2500000], rate=116099.07/min [2510000], rate=116563.47/min [2520000], rate=116937.35/min [2530000], rate=117220.08/min [2540000], rate=117411.40/min [2550000], rate=117782.91/min [2560000], rate=116540.21/min [2570000], rate=116377.36/min [2580000], rate=116654.11/min [2590000], rate=116579.14/min [2600000], rate=116504.85/min [2610000], rate=116344.73/min [2620000], rate=116100.44/min [2630000], rate=115689.15/min [2640000], rate=115874.18/min [2650000], rate=116143.17/min [2660000], rate=116241.81/min -building interval tree based on /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=109090.91/min [30000], rate=94736.84/min [40000], rate=88888.89/min [50000], rate=96774.19/min [60000], rate=105882.35/min [70000], rate=110526.32/min [80000], rate=123076.92/min [90000], rate=138461.54/min [100000], rate=150000.00/min [110000], rate=153488.37/min [120000], rate=163636.36/min [130000], rate=159183.67/min [140000], rate=158490.57/min [150000], rate=157894.74/min [160000], rate=157377.05/min [170000], rate=156923.08/min [180000], rate=152112.68/min [190000], rate=148051.95/min [200000], rate=141176.47/min [210000], rate=135483.87/min [220000], rate=140425.53/min [230000], rate=142268.04/min [240000], rate=144000.00/min [250000], rate=147058.82/min [260000], rate=150000.00/min [270000], rate=150000.00/min [280000], rate=150000.00/min [290000], rate=150000.00/min [300000], rate=151260.50/min [310000], rate=153719.01/min [320000], rate=156097.56/min [330000], rate=159677.42/min [340000], rate=164516.13/min [350000], rate=169354.84/min [360000], rate=172800.00/min [370000], rate=177600.00/min [380000], rate=182400.00/min [390000], rate=185714.29/min [400000], rate=190476.19/min [410000], rate=195238.10/min [420000], rate=198425.20/min [430000], rate=203149.61/min [440000], rate=207874.02/min [450000], rate=210937.50/min [460000], rate=215625.00/min [470000], rate=220312.50/min [480000], rate=225000.00/min [490000], rate=227906.98/min [500000], rate=232558.14/min [510000], rate=237209.30/min [520000], rate=236363.64/min [530000], rate=233823.53/min [540000], rate=229787.23/min [550000], rate=221476.51/min [560000], rate=214012.74/min [570000], rate=208536.59/min [580000], rate=210909.09/min [590000], rate=211976.05/min [600000], rate=214285.71/min [610000], rate=217857.14/min [620000], rate=220118.34/min [630000], rate=221052.63/min [640000], rate=221965.32/min [650000], rate=220338.98/min [660000], rate=217582.42/min [670000], rate=216129.03/min [680000], rate=214736.84/min [690000], rate=214507.77/min [700000], rate=211055.28/min [710000], rate=207804.88/min [720000], rate=202816.90/min [730000], rate=199090.91/min [740000], rate=200904.98/min [750000], rate=200892.86/min [760000], rate=200881.06/min [770000], rate=202631.58/min [780000], rate=202597.40/min [790000], rate=200847.46/min [800000], rate=201680.67/min [810000], rate=200826.45/min [820000], rate=200816.33/min [830000], rate=202439.02/min [840000], rate=204048.58/min [850000], rate=205645.16/min [860000], rate=208064.52/min [870000], rate=209638.55/min [880000], rate=212048.19/min [890000], rate=213600.00/min [900000], rate=216000.00/min [910000], rate=218400.00/min [920000], rate=220800.00/min [930000], rate=222310.76/min [940000], rate=224701.20/min [950000], rate=227091.63/min [960000], rate=229482.07/min [970000], rate=230952.38/min [980000], rate=233333.33/min [990000], rate=235714.29/min [1000000], rate=237154.15/min [1010000], rate=239525.69/min [1020000], rate=241897.23/min [1030000], rate=244268.77/min [1040000], rate=242801.56/min [1050000], rate=241379.31/min [1060000], rate=240000.00/min [1070000], rate=236900.37/min [1080000], rate=231428.57/min [1090000], rate=227874.56/min [1100000], rate=229166.67/min [1110000], rate=229655.17/min [1120000], rate=230927.84/min [1130000], rate=232989.69/min [1140000], rate=234246.58/min [1150000], rate=234693.88/min [1160000], rate=235135.14/min [1170000], rate=236363.64/min [1180000], rate=234437.09/min [1190000], rate=232573.29/min [1200000], rate=233766.23/min [1210000], rate=233440.51/min [1220000], rate=233865.81/min [1230000], rate=232075.47/min [1240000], rate=229629.63/min [1250000], rate=226586.10/min [1260000], rate=223008.85/min [1270000], rate=220231.21/min [1280000], rate=221965.32/min [1290000], rate=221142.86/min [1300000], rate=220963.17/min [1310000], rate=222033.90/min [1320000], rate=221848.74/min [1330000], rate=221052.63/min [1340000], rate=221487.60/min [1350000], rate=220108.70/min [1360000], rate=220540.54/min [1370000], rate=220967.74/min [1380000], rate=221983.91/min [1390000], rate=223592.49/min [1400000], rate=224598.93/min [1410000], rate=225600.00/min [1420000], rate=226595.74/min [1430000], rate=225789.47/min [1440000], rate=225000.00/min [1450000], rate=224226.80/min [1460000], rate=221212.12/min [1470000], rate=218858.56/min [1480000], rate=217647.06/min [1490000], rate=218048.78/min [1500000], rate=218446.60/min [1510000], rate=219902.91/min [1520000], rate=221359.22/min [1530000], rate=222276.03/min [1540000], rate=222650.60/min [1550000], rate=223021.58/min [1560000], rate=222857.14/min [1570000], rate=222169.81/min [1580000], rate=221495.33/min [1590000], rate=221860.47/min [1600000], rate=222222.22/min [1610000], rate=222068.97/min [1620000], rate=220408.16/min [1630000], rate=218791.95/min [1640000], rate=216740.09/min [1650000], rate=214285.71/min [1660000], rate=214655.17/min [1670000], rate=215021.46/min [1680000], rate=214925.37/min [1690000], rate=215286.62/min [1700000], rate=215189.87/min [1710000], rate=214196.24/min [1720000], rate=214553.01/min [1730000], rate=213580.25/min [1740000], rate=213934.43/min [1750000], rate=214723.93/min [1760000], rate=215510.20/min [1770000], rate=216293.28/min [1780000], rate=217515.27/min [1790000], rate=218292.68/min [1800000], rate=218623.48/min [1810000], rate=210465.12/min [1820000], rate=204112.15/min [1830000], rate=198194.95/min [1840000], rate=191003.46/min [1850000], rate=184079.60/min [1860000], rate=179710.14/min [1870000], rate=175862.07/min [1880000], rate=171951.22/min [1890000], rate=169760.48/min [1900000], rate=165938.86/min [1910000], rate=159166.67/min [1920000], rate=152179.66/min [1930000], rate=145660.38/min [1940000], rate=142124.54/min [1950000], rate=137809.19/min [1960000], rate=134707.90/min [1970000], rate=131187.57/min [1980000], rate=128293.74/min [1990000], rate=123474.66/min [2000000], rate=120240.48/min [2010000], rate=118934.91/min [2020000], rate=117669.90/min [2030000], rate=116221.37/min [2040000], rate=115799.43/min [2050000], rate=115384.62/min [2060000], rate=114550.51/min [2070000], rate=113528.34/min [2080000], rate=111727.84/min [2090000], rate=110875.33/min [2100000], rate=110236.22/min [2110000], rate=109232.10/min [2120000], rate=107979.63/min [2130000], rate=107214.77/min [2140000], rate=107000.00/min [2150000], rate=106435.64/min [2160000], rate=105709.62/min [2170000], rate=104160.00/min [2180000], rate=102507.84/min [2190000], rate=100458.72/min [2200000], rate=99622.64/min [2210000], rate=99177.26/min [2220000], rate=98593.63/min [2230000], rate=97807.02/min [2240000], rate=97250.36/min [2250000], rate=96428.57/min [2260000], rate=96102.06/min [2270000], rate=95578.95/min [2280000], rate=95264.62/min [2290000], rate=95086.51/min [2300000], rate=94910.59/min [2310000], rate=94607.51/min [2320000], rate=93990.55/min [2330000], rate=93511.71/min [2340000], rate=92857.14/min [2350000], rate=92763.16/min [2360000], rate=92609.55/min [2370000], rate=92217.90/min [2380000], rate=91597.18/min [2390000], rate=90759.49/min [2400000], rate=90169.07/min [2410000], rate=89646.62/min [2420000], rate=89244.01/min [2430000], rate=89010.99/min [2440000], rate=88727.27/min [2450000], rate=88235.29/min [2460000], rate=88014.31/min [2470000], rate=87848.25/min [2480000], rate=87580.93/min [2490000], rate=87521.97/min [2500000], rate=87108.01/min [2510000], rate=86452.35/min [2520000], rate=86202.96/min [2530000], rate=86103.23/min [2540000], rate=85956.01/min [2550000], rate=85858.59/min [2560000], rate=85762.14/min [2570000], rate=85761.96/min [2580000], rate=85714.29/min [2590000], rate=85714.29/min [2600000], rate=85761.41/min [2610000], rate=85761.23/min [2620000], rate=85854.72/min [2630000], rate=85854.19/min -building interval tree based on /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=300000.00/min [20000], rate=200000.00/min [30000], rate=163636.36/min [40000], rate=171428.57/min [50000], rate=166666.67/min [60000], rate=156521.74/min [70000], rate=155555.56/min [80000], rate=154838.71/min [90000], rate=163636.36/min [100000], rate=176470.59/min [110000], rate=188571.43/min [120000], rate=200000.00/min [130000], rate=195000.00/min [140000], rate=182608.70/min [150000], rate=173076.92/min [160000], rate=171428.57/min [170000], rate=167213.11/min [180000], rate=166153.85/min [190000], rate=165217.39/min [200000], rate=162162.16/min [210000], rate=155555.56/min [220000], rate=151724.14/min [230000], rate=148387.10/min [240000], rate=148453.61/min [250000], rate=145631.07/min [260000], rate=143119.27/min [270000], rate=142105.26/min [280000], rate=141176.47/min [290000], rate=140322.58/min [300000], rate=140625.00/min [310000], rate=140909.09/min [320000], rate=135211.27/min [330000], rate=128571.43/min [340000], rate=121428.57/min [350000], rate=117977.53/min [360000], rate=114893.62/min [370000], rate=111000.00/min [380000], rate=109090.91/min [390000], rate=106849.32/min [400000], rate=103896.10/min [410000], rate=102074.69/min [420000], rate=101204.82/min [430000], rate=98850.57/min [440000], rate=97416.97/min [450000], rate=96428.57/min [460000], rate=96167.25/min [470000], rate=95593.22/min [480000], rate=95681.06/min [490000], rate=95145.63/min [500000], rate=94637.22/min [510000], rate=94153.85/min [520000], rate=94259.82/min [530000], rate=93805.31/min [540000], rate=93641.62/min [550000], rate=93750.00/min [560000], rate=93593.31/min [570000], rate=93956.04/min [580000], rate=94308.94/min [590000], rate=94906.17/min [600000], rate=95490.72/min [610000], rate=95561.36/min [620000], rate=94416.24/min [630000], rate=94029.85/min [640000], rate=93430.66/min [650000], rate=92857.14/min [660000], rate=92523.36/min [670000], rate=92201.83/min [680000], rate=91685.39/min [690000], rate=90989.01/min [700000], rate=90128.76/min [710000], rate=89308.18/min [720000], rate=88706.37/min [730000], rate=88663.97/min [740000], rate=88446.22/min [750000], rate=88235.29/min [760000], rate=87861.27/min [770000], rate=88000.00/min [780000], rate=87969.92/min [790000], rate=88104.09/min [800000], rate=88235.29/min [810000], rate=88524.59/min [820000], rate=88969.26/min [830000], rate=89247.31/min [840000], rate=89679.72/min [850000], rate=90106.01/min [860000], rate=90052.36/min [870000], rate=90000.00/min [880000], rate=89491.53/min [890000], rate=89000.00/min [900000], rate=88815.79/min [910000], rate=88492.71/min [920000], rate=88320.00/min [930000], rate=88012.62/min [940000], rate=87850.47/min [950000], rate=87557.60/min [960000], rate=87537.99/min [970000], rate=87125.75/min [980000], rate=87111.11/min [990000], rate=86969.25/min [1000000], rate=86705.20/min [1010000], rate=86819.48/min [1020000], rate=86440.68/min [1030000], rate=86072.42/min [1040000], rate=85950.41/min [1050000], rate=85948.16/min [1060000], rate=86062.25/min [1070000], rate=85828.88/min [1080000], rate=86055.78/min [1090000], rate=86052.63/min [1100000], rate=86049.54/min [1110000], rate=86157.83/min [1120000], rate=86043.53/min [1130000], rate=86700.77/min [1140000], rate=86802.03/min [1150000], rate=86250.00/min [1160000], rate=85503.69/min [1170000], rate=84578.31/min [1180000], rate=83985.77/min [1190000], rate=83411.21/min [1200000], rate=82758.62/min [1210000], rate=82126.70/min [1220000], rate=81696.43/min [1230000], rate=81277.53/min [1240000], rate=80606.72/min [1250000], rate=80213.90/min [1260000], rate=79662.80/min [1270000], rate=77914.11/min [1280000], rate=77341.39/min [1290000], rate=77168.49/min [1300000], rate=77075.10/min [1310000], rate=76983.35/min [1320000], rate=77192.98/min [1330000], rate=77250.73/min [1340000], rate=77456.65/min [1350000], rate=77959.58/min [1360000], rate=78386.17/min [1370000], rate=78811.12/min [1380000], rate=78932.32/min [1390000], rate=78977.27/min [1400000], rate=79021.64/min [1410000], rate=79139.38/min [1420000], rate=79255.81/min [1430000], rate=79444.44/min [1440000], rate=79193.40/min [1450000], rate=77956.99/min [1460000], rate=77248.68/min [1470000], rate=76629.02/min [1480000], rate=76419.97/min [1490000], rate=76279.86/min [1500000], rate=75949.37/min [1510000], rate=75626.04/min [1520000], rate=75496.69/min [1530000], rate=75307.63/min [1540000], rate=75367.05/min [1550000], rate=75364.67/min [1560000], rate=75060.14/min [1570000], rate=74407.58/min [1580000], rate=74120.41/min [1590000], rate=73839.01/min [1600000], rate=73676.13/min [1610000], rate=73684.21/min [1620000], rate=73580.62/min [1630000], rate=73589.16/min [1640000], rate=73652.69/min [1650000], rate=73770.49/min [1660000], rate=73887.24/min [1670000], rate=73948.34/min [1680000], rate=74008.81/min [1690000], rate=74122.81/min [1700000], rate=74181.82/min [1710000], rate=74293.99/min [1720000], rate=74458.87/min [1730000], rate=74676.26/min [1740000], rate=74838.71/min [1750000], rate=75107.30/min [1760000], rate=75160.14/min [1770000], rate=75000.00/min [1780000], rate=74894.81/min [1790000], rate=74843.21/min [1800000], rate=74740.48/min [1810000], rate=74690.51/min [1820000], rate=74437.63/min [1830000], rate=74339.88/min [1840000], rate=74343.43/min [1850000], rate=74297.19/min [1860000], rate=74449.63/min [1870000], rate=74501.99/min [1880000], rate=74553.87/min [1890000], rate=74654.38/min [1900000], rate=74656.19/min [1910000], rate=74755.38/min [1920000], rate=74902.47/min [1930000], rate=75048.61/min [1940000], rate=75291.07/min [1950000], rate=75483.87/min [1960000], rate=75724.40/min [1970000], rate=75964.01/min [1980000], rate=76202.69/min [1990000], rate=76342.71/min [2000000], rate=76481.84/min [2010000], rate=76425.86/min [2020000], rate=76178.50/min [2030000], rate=75982.53/min [2040000], rate=75883.45/min [2050000], rate=75785.58/min [2060000], rate=75550.12/min [2070000], rate=75547.45/min [2080000], rate=75499.09/min [2090000], rate=75496.69/min [2100000], rate=75449.10/min [2110000], rate=75446.96/min [2120000], rate=75534.44/min [2130000], rate=75666.07/min [2140000], rate=75662.93/min [2150000], rate=75704.23/min [2160000], rate=75789.47/min [2170000], rate=75918.37/min [2180000], rate=76223.78/min [2190000], rate=76528.83/min [2200000], rate=76878.28/min [2210000], rate=77227.72/min [2220000], rate=77532.01/min [2230000], rate=77745.50/min [2240000], rate=78048.78/min [2250000], rate=78306.26/min [2260000], rate=78517.66/min [2270000], rate=78320.87/min [2280000], rate=78082.19/min [2290000], rate=78201.48/min [2300000], rate=78320.09/min [2310000], rate=78482.45/min [2320000], rate=78246.21/min [2330000], rate=78100.56/min [2340000], rate=77913.43/min [2350000], rate=77900.55/min [2360000], rate=77844.97/min [2370000], rate=78088.96/min [2380000], rate=78289.47/min [2390000], rate=78532.31/min [2400000], rate=78731.55/min [2410000], rate=78930.13/min [2420000], rate=79128.07/min [2430000], rate=79282.22/min [2440000], rate=79263.67/min [2450000], rate=79202.59/min [2460000], rate=79184.55/min [2470000], rate=79208.98/min [2480000], rate=79360.00/min [2490000], rate=79341.48/min [2500000], rate=79407.09/min [2510000], rate=79430.38/min [2520000], rate=79453.49/min [2530000], rate=79559.75/min [2540000], rate=79582.25/min [2550000], rate=79687.50/min [2560000], rate=79875.20/min [2570000], rate=80103.90/min [2580000], rate=80373.83/min [2590000], rate=80559.88/min [2600000], rate=80745.34/min [2610000], rate=80846.67/min [2620000], rate=80947.48/min [2630000], rate=81047.77/min [2640000], rate=81064.48/min -building interval tree based on /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=133333.33/min [30000], rate=94736.84/min [40000], rate=85714.29/min [50000], rate=78947.37/min [60000], rate=78260.87/min [70000], rate=80769.23/min [80000], rate=80000.00/min [90000], rate=80597.01/min [100000], rate=82191.78/min [110000], rate=82500.00/min [120000], rate=82758.62/min [130000], rate=83870.97/min [140000], rate=84848.48/min [150000], rate=85714.29/min [160000], rate=87272.73/min [170000], rate=88695.65/min [180000], rate=88524.59/min [190000], rate=88372.09/min [200000], rate=89552.24/min [210000], rate=91304.35/min [220000], rate=93617.02/min [230000], rate=95833.33/min [240000], rate=97297.30/min [250000], rate=100000.00/min [260000], rate=101298.70/min [270000], rate=102531.65/min [280000], rate=102439.02/min [290000], rate=103571.43/min [300000], rate=104651.16/min [310000], rate=106285.71/min [320000], rate=107262.57/min [330000], rate=108791.21/min [340000], rate=106250.00/min [350000], rate=101941.75/min [360000], rate=99082.57/min [370000], rate=96943.23/min [380000], rate=95000.00/min [390000], rate=92857.14/min [400000], rate=91254.75/min [410000], rate=90109.89/min [420000], rate=88732.39/min [430000], rate=88659.79/min [440000], rate=87417.22/min [450000], rate=86538.46/min [460000], rate=86250.00/min [470000], rate=85975.61/min [480000], rate=85714.29/min [490000], rate=84971.10/min [500000], rate=84507.04/min [510000], rate=83835.62/min [520000], rate=83646.11/min [530000], rate=83464.57/min [540000], rate=83290.49/min [550000], rate=83544.30/min [560000], rate=83790.52/min [570000], rate=84236.45/min [580000], rate=84466.02/min [590000], rate=84689.00/min [600000], rate=85106.38/min [610000], rate=85714.29/min [620000], rate=86111.11/min [630000], rate=85909.09/min [640000], rate=84955.75/min [650000], rate=84051.72/min [660000], rate=83193.28/min [670000], rate=82546.20/min [680000], rate=81763.53/min [690000], rate=81335.95/min [700000], rate=80924.86/min [710000], rate=80529.30/min [720000], rate=80148.42/min [730000], rate=79927.01/min [740000], rate=79427.55/min [750000], rate=79225.35/min [760000], rate=78892.73/min [770000], rate=78438.03/min [780000], rate=78260.87/min [790000], rate=77960.53/min [800000], rate=77419.35/min [810000], rate=76415.09/min [820000], rate=75808.94/min [830000], rate=75569.04/min [840000], rate=75336.32/min [850000], rate=75110.46/min [860000], rate=74782.61/min [870000], rate=73937.68/min [880000], rate=73130.19/min [890000], rate=72162.16/min [900000], rate=71052.63/min [910000], rate=69910.37/min [920000], rate=69433.96/min [930000], rate=69144.98/min [940000], rate=68864.47/min [950000], rate=68263.47/min [960000], rate=67844.52/min [970000], rate=67361.11/min [980000], rate=66970.39/min [990000], rate=66442.95/min [1000000], rate=65861.69/min [1010000], rate=65161.29/min [1020000], rate=64218.26/min [1030000], rate=62996.94/min [1040000], rate=62587.76/min [1050000], rate=62068.97/min [1060000], rate=61687.68/min [1070000], rate=61318.05/min [1080000], rate=60845.07/min [1090000], rate=60443.62/min [1100000], rate=58666.67/min [1110000], rate=58421.05/min [1120000], rate=58232.24/min [1130000], rate=57849.83/min [1140000], rate=57527.33/min [1150000], rate=57356.61/min [1160000], rate=57002.46/min [1170000], rate=56567.28/min [1180000], rate=56235.11/min [1190000], rate=55956.11/min [1200000], rate=55727.55/min [1210000], rate=55547.05/min [1220000], rate=55454.55/min [1230000], rate=55239.52/min [1240000], rate=55029.59/min [1250000], rate=54904.83/min [1260000], rate=54822.34/min [1270000], rate=54859.61/min [1280000], rate=54778.89/min [1290000], rate=54777.07/min [1300000], rate=54775.28/min [1310000], rate=54735.38/min [1320000], rate=54733.93/min [1330000], rate=54770.08/min [1340000], rate=54805.73/min [1350000], rate=54915.25/min [1360000], rate=54986.52/min [1370000], rate=55130.78/min [1380000], rate=55236.82/min [1390000], rate=55341.74/min [1400000], rate=55518.84/min [1410000], rate=55694.54/min [1420000], rate=55942.22/min [1430000], rate=56115.11/min [1440000], rate=56360.08/min [1450000], rate=56566.97/min [1460000], rate=56809.34/min [1470000], rate=57050.45/min [1480000], rate=57290.32/min [1490000], rate=57455.01/min [1500000], rate=57544.76/min [1510000], rate=57707.01/min [1520000], rate=57868.02/min [1530000], rate=58064.52/min [1540000], rate=58259.77/min [1550000], rate=58453.80/min [1560000], rate=58683.39/min [1570000], rate=58875.00/min [1580000], rate=59028.64/min [1590000], rate=58998.14/min [1600000], rate=58931.86/min [1610000], rate=58830.69/min [1620000], rate=58837.77/min [1630000], rate=58738.74/min [1640000], rate=58746.27/min [1650000], rate=58753.71/min [1660000], rate=58726.42/min [1670000], rate=58802.82/min [1680000], rate=58844.13/min [1690000], rate=58782.61/min [1700000], rate=58891.45/min [1710000], rate=58999.42/min [1720000], rate=59106.53/min [1730000], rate=59280.41/min [1740000], rate=59453.30/min [1750000], rate=59659.09/min [1760000], rate=59830.03/min [1770000], rate=60067.87/min [1780000], rate=60304.91/min [1790000], rate=60575.30/min [1800000], rate=60879.37/min [1810000], rate=61079.87/min [1820000], rate=61313.87/min [1830000], rate=61616.16/min [1840000], rate=61883.41/min [1850000], rate=62011.17/min [1860000], rate=61965.57/min [1870000], rate=61920.53/min [1880000], rate=61909.99/min [1890000], rate=61933.37/min [1900000], rate=62159.21/min [1910000], rate=62350.38/min [1920000], rate=62574.69/min [1930000], rate=62798.26/min [1940000], rate=63021.12/min [1950000], rate=63072.78/min [1960000], rate=63191.83/min [1970000], rate=63276.23/min [1980000], rate=63360.00/min [1990000], rate=63476.87/min [2000000], rate=63593.00/min [2010000], rate=63674.76/min [2020000], rate=63789.47/min [2030000], rate=63937.01/min [2040000], rate=64117.34/min [2050000], rate=64196.24/min [2060000], rate=64308.01/min [2070000], rate=64020.62/min [2080000], rate=63479.15/min [2090000], rate=62637.36/min [2100000], rate=62593.14/min [2110000], rate=62642.26/min [2120000], rate=62752.84/min [2130000], rate=62893.70/min [2140000], rate=63064.83/min [2150000], rate=63235.29/min [2160000], rate=63096.40/min [2170000], rate=62446.04/min [2180000], rate=61264.64/min [2190000], rate=61002.79/min [2200000], rate=60998.15/min [2210000], rate=60993.56/min [2220000], rate=61016.95/min [2230000], rate=60873.52/min [2240000], rate=60786.97/min [2250000], rate=60783.43/min [2260000], rate=60698.30/min [2270000], rate=60695.19/min [2280000], rate=60719.04/min [2290000], rate=60689.05/min [2300000], rate=60659.34/min [2310000], rate=60656.46/min [2320000], rate=60548.06/min [2330000], rate=60232.66/min [2340000], rate=59948.76/min [2350000], rate=59669.91/min [2360000], rate=59721.64/min [2370000], rate=59773.01/min [2380000], rate=59699.00/min [2390000], rate=59774.91/min [2400000], rate=59900.17/min [2410000], rate=60024.91/min [2420000], rate=60149.13/min [2430000], rate=60297.77/min [2440000], rate=60246.91/min [2450000], rate=60171.92/min [2460000], rate=60000.00/min [2470000], rate=59589.87/min [2480000], rate=58930.69/min [2490000], rate=58427.85/min [2500000], rate=58094.50/min [2510000], rate=57679.05/min [2520000], rate=57272.73/min [2530000], rate=56981.98/min [2540000], rate=56696.43/min [2550000], rate=56499.26/min [2560000], rate=56449.83/min [2570000], rate=56277.37/min [2580000], rate=56209.15/min [2590000], rate=56060.61/min [2600000], rate=56094.93/min [2610000], rate=56068.74/min [2620000], rate=56102.78/min [2630000], rate=55917.79/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir --filt_file /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 10000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 12000000.00 reads per min processed... 13500000.00 reads per min processed... 12000000.00 reads per min processed... 13200000.00 reads per min processed... 14400000.00 reads per min processed... 13000000.00 reads per min processed... 14000000.00 reads per min processed... 12857142.86 reads per min processed... 13714285.71 reads per min processed... 12750000.00 reads per min processed... 12000000.00 reads per min processed... 10363636.36 reads per min processed... 8571428.57 reads per min processed... 7875000.00 reads per min processed... 7333333.33 reads per min processed... 6900000.00 reads per min processed... 6857142.86 reads per min processed... 6818181.82 reads per min processed... 6782608.70 reads per min processed... 6750000.00 reads per min processed... 6720000.00 reads per min processed... 6444444.44 reads per min processed... 6428571.43 reads per min processed... 6200000.00 reads per min processed... 6000000.00 reads per min processed... 5657142.86 reads per min processed... 5666666.67 reads per min processed... 5526315.79 reads per min processed... 5538461.54 reads per min processed... 5550000.00 reads per min processed... 5560975.61 reads per min processed... 5571428.57 reads per min processed... 5333333.33 reads per min processed... 5347826.09 reads per min processed... 5361702.13 reads per min processed... 5375000.00 reads per min processed... 5280000.00 reads per min processed... 5192307.69 reads per min processed... 5207547.17 reads per min processed... 5127272.73 reads per min processed... 5142857.14 reads per min processed... 5157894.74 reads per min processed... 5172413.79 reads per min processed... 5100000.00 reads per min processed... 5114754.10 reads per min processed... 5047619.05 reads per min processed... 5062500.00 reads per min processed... 5076923.08 reads per min processed... 5090909.09 reads per min processed... 5029411.76 reads per min processed... 5043478.26 reads per min processed... 5130434.78 reads per min processed... 5142857.14 reads per min processed... 5154929.58 reads per min processed... 5239436.62 reads per min processed... 5323943.66 reads per min processed... 5333333.33 reads per min processed... 5416666.67 reads per min processed... 5424657.53 reads per min processed... 5506849.32 reads per min processed... 5589041.10 reads per min processed... 5594594.59 reads per min processed... 5675675.68 reads per min processed... 5680000.00 reads per min processed... 5760000.00 reads per min processed... 5763157.89 reads per min processed... 5692307.69 reads per min processed... 5696202.53 reads per min processed... 5700000.00 reads per min processed... 5634146.34 reads per min processed... 5638554.22 reads per min processed... 5576470.59 reads per min processed... 5581395.35 reads per min processed... 5522727.27 reads per min processed... 5528089.89 reads per min processed... 5533333.33 reads per min processed... 5478260.87 reads per min processed... 5483870.97 reads per min processed... 5489361.70 reads per min processed... 5437500.00 reads per min processed... 5443298.97 reads per min processed... 5393939.39 reads per min processed... 5400000.00 reads per min processed... 5405940.59 reads per min processed... 5411764.71 reads per min processed... 5417475.73 reads per min processed... 5423076.92 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.8MPK6jhGFh/HeadNeckN_FFPE_L01_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -131616.670944 EM: Round [1] log likelihood: -131251.856026 EM: Round [2] log likelihood: -131108.875147 EM: Round [3] log likelihood: -131039.310613 EM: Round [4] log likelihood: -131001.991076 EM: Round [5] log likelihood: -130980.757649 EM: Round [6] log likelihood: -130968.069255 EM: Round [7] log likelihood: -130960.117195 EM: Round [8] log likelihood: -130954.899972 EM: Round [9] log likelihood: -130951.331563 EM: Round [10] log likelihood: -130948.801461 EM: Round [11] log likelihood: -130946.952676 EM: Round [12] log likelihood: -130945.567741 EM: Round [13] log likelihood: -130944.508790 EM: Round [14] log likelihood: -130943.685140 EM: Round [15] log likelihood: -130943.035150 EM: Round [16] log likelihood: -130942.515717 EM: Round [17] log likelihood: -130942.095972 EM: Round [18] log likelihood: -130941.753357 EM: Round [19] log likelihood: -130941.471105 EM: Round [20] log likelihood: -130941.236581 EM: Round [21] log likelihood: -130941.040140 EM: Round [22] log likelihood: -130940.874345 EM: Round [23] log likelihood: -130940.733406 EM: Round [24] log likelihood: -130940.612778 EM: Round [25] log likelihood: -130940.508863 EM: Round [26] log likelihood: -130940.418792 EM: Round [27] log likelihood: -130940.340265 EM: Round [28] log likelihood: -130940.271423 EM: Round [29] log likelihood: -130940.210752 EM: Round [30] log likelihood: -130940.157019 EM: Round [31] log likelihood: -130940.109206 EM: Round [32] log likelihood: -130940.066473 EM: Round [33] log likelihood: -130940.028121 EM: Round [34] log likelihood: -130939.993565 EM: Round [35] log likelihood: -130939.962316 EM: Round [36] log likelihood: -130939.933958 EM: Round [37] log likelihood: -130939.908140 EM: Round [38] log likelihood: -130939.884563 EM: Round [39] log likelihood: -130939.862971 EM: Round [40] log likelihood: -130939.843143 EM: Round [41] log likelihood: -130939.824890 EM: Round [42] log likelihood: -130939.808045 EM: Round [43] log likelihood: -130939.792466 EM: Round [44] log likelihood: -130939.778028 EM: Round [45] log likelihood: -130939.764620 EM: Round [46] log likelihood: -130939.752145 EM: Round [47] log likelihood: -130939.740519 EM: Round [48] log likelihood: -130939.729666 EM: Round [49] log likelihood: -130939.719518 EM: Round [50] log likelihood: -130939.710015 EM: Round [51] log likelihood: -130939.701105 EM: Round [52] log likelihood: -130939.692739 EM: Round [53] log likelihood: -130939.684874 EM: Round [54] log likelihood: -130939.677471 EM: Round [55] log likelihood: -130939.670495 EM: Round [56] log likelihood: -130939.663915 EM: Round [57] log likelihood: -130939.657701 EM: Round [58] log likelihood: -130939.651827 EM: Round [59] log likelihood: -130939.646271 EM: Round [60] log likelihood: -130939.641009 EM: Round [61] log likelihood: -130939.636021 EM: Round [62] log likelihood: -130939.631291 EM: Round [63] log likelihood: -130939.626801 EM: Round [64] log likelihood: -130939.622535 EM: Round [65] log likelihood: -130939.618480 EM: Round [66] log likelihood: -130939.614622 EM: Round [67] log likelihood: -130939.610950 EM: Round [68] log likelihood: -130939.607452 EM: Round [69] log likelihood: -130939.604118 EM: Round [70] log likelihood: -130939.600939 EM: Round [71] log likelihood: -130939.597905 EM: Round [72] log likelihood: -130939.595009 EM: Round [73] log likelihood: -130939.592242 EM: Round [74] log likelihood: -130939.589598 EM: Round [75] log likelihood: -130939.587069 EM: Round [76] log likelihood: -130939.584651 EM: Round [77] log likelihood: -130939.582336 EM: Round [78] log likelihood: -130939.580120 EM: Round [79] log likelihood: -130939.577997 EM: Round [80] log likelihood: -130939.575962 EM: Round [81] log likelihood: -130939.574012 EM: Round [82] log likelihood: -130939.572142 EM: Round [83] log likelihood: -130939.570347 EM: Round [84] log likelihood: -130939.568625 EM: Round [85] log likelihood: -130939.566972 EM: Round [86] log likelihood: -130939.565384 EM: Round [87] log likelihood: -130939.563858 EM: Round [88] log likelihood: -130939.562392 EM: Round [89] log likelihood: -130939.560982 EM: Round [90] log likelihood: -130939.559627 EM: Round [91] log likelihood: -130939.558323 EM: Round [92] log likelihood: -130939.557069 EM: Round [93] log likelihood: -130939.555861 EM: Round [94] log likelihood: -130939.554699 EM: Round [95] log likelihood: -130939.553579 EM: Round [96] log likelihood: -130939.552500 EM: Round [97] log likelihood: -130939.551461 EM: Round [98] log likelihood: -130939.550460 EM: Round [99] log likelihood: -130939.549494 EM: Round [100] log likelihood: -130939.548563 EM: Round [101] log likelihood: -130939.547665 EM: Round [102] log likelihood: -130939.546798 EM: Round [103] log likelihood: -130939.545962 EM: Round [104] log likelihood: -130939.545155 EM: Round [105] log likelihood: -130939.544376 EM: Round [106] log likelihood: -130939.543623 EM: Round [107] log likelihood: -130939.542897 EM: Round [108] log likelihood: -130939.542194 EM: Round [109] log likelihood: -130939.541516 EM: Round [110] log likelihood: -130939.540860 EM: Round [111] log likelihood: -130939.540226 EM: Round [112] log likelihood: -130939.539613 EM: Round [113] log likelihood: -130939.539020 EM: Round [114] log likelihood: -130939.538447 EM: Round [115] log likelihood: -130939.537892 EM: Round [116] log likelihood: -130939.537355 EM: Round [117] log likelihood: -130939.536835 EM: Round [118] log likelihood: -130939.536331 EM: Round [119] log likelihood: -130939.535844 EM: Round [120] log likelihood: -130939.535372 EM: Round [121] log likelihood: -130939.534915 EM: Round [122] log likelihood: -130939.534472 EM: Round [123] log likelihood: -130939.534042 EM: Round [124] log likelihood: -130939.533626 EM: Round [125] log likelihood: -130939.533223 EM: Round [126] log likelihood: -130939.532831 EM: Round [127] log likelihood: -130939.532452 EM: Round [128] log likelihood: -130939.532084 EM: Round [129] log likelihood: -130939.531726 EM: Round [130] log likelihood: -130939.531380 EM: Round [131] log likelihood: -130939.531043 EM: Round [132] log likelihood: -130939.530717 EM: Round [133] log likelihood: -130939.530400 EM: Round [134] log likelihood: -130939.530092 EM: Round [135] log likelihood: -130939.529792 EM: Round [136] log likelihood: -130939.529502 EM: Round [137] log likelihood: -130939.529219 EM: Round [138] log likelihood: -130939.528945 EM: Round [139] log likelihood: -130939.528678 EM: Round [140] log likelihood: -130939.528419 EM: Round [141] log likelihood: -130939.528166 EM: Round [142] log likelihood: -130939.527921 EM: Round [143] log likelihood: -130939.527682 EM: Round [144] log likelihood: -130939.527450 EM: Round [145] log likelihood: -130939.527224 EM: Round [146] log likelihood: -130939.527004 EM: Round [147] log likelihood: -130939.526790 EM: Round [148] log likelihood: -130939.526582 EM: Round [149] log likelihood: -130939.526379 EM: Round [150] log likelihood: -130939.526181 EM: Round [151] log likelihood: -130939.525988 EM: Round [152] log likelihood: -130939.525800 EM: Round [153] log likelihood: -130939.525617 EM: Round [154] log likelihood: -130939.525439 EM: Round [155] log likelihood: -130939.525265 EM: Round [156] log likelihood: -130939.525096 EM: Round [157] log likelihood: -130939.524931 EM: Round [158] log likelihood: -130939.524769 EM: Round [159] log likelihood: -130939.524612 EM: Round [160] log likelihood: -130939.524459 EM: Round [161] log likelihood: -130939.524309 EM: Round [162] log likelihood: -130939.524163 EM: Round [163] log likelihood: -130939.524020 EM: Round [164] log likelihood: -130939.523881 EM: Round [165] log likelihood: -130939.523745 EM: Round [166] log likelihood: -130939.523612 EM: Round [167] log likelihood: -130939.523482 EM: Round [168] log likelihood: -130939.523355 EM: Round [169] log likelihood: -130939.523231 EM: Round [170] log likelihood: -130939.523110 EM: Round [171] log likelihood: -130939.522991 EM: Round [172] log likelihood: -130939.522876 EM: Round [173] log likelihood: -130939.522762 EM: Round [174] log likelihood: -130939.522652 EM: Round [175] log likelihood: -130939.522543 EM: Round [176] log likelihood: -130939.522437 EM: Round [177] log likelihood: -130939.522334 EM: Round [178] log likelihood: -130939.522232 EM: Round [179] log likelihood: -130939.522133 EM: Stopping iterations at round 179 due to insufficient improvement in likelihood. EM: Starting log likelihood: -130901.085529 EM: Round [1] log likelihood: -130594.537621 EM: Round [2] log likelihood: -130479.037994 EM: Round [3] log likelihood: -130424.152839 EM: Round [4] log likelihood: -130395.144612 EM: Round [5] log likelihood: -130378.847120 EM: Round [6] log likelihood: -130369.230270 EM: Round [7] log likelihood: -130363.278458 EM: Round [8] log likelihood: -130359.419319 EM: Round [9] log likelihood: -130356.807014 EM: Round [10] log likelihood: -130354.970810 EM: Round [11] log likelihood: -130353.638478 EM: Round [12] log likelihood: -130352.646031 EM: Round [13] log likelihood: -130351.890608 EM: Round [14] log likelihood: -130351.305186 EM: Round [15] log likelihood: -130350.844576 EM: Round [16] log likelihood: -130350.477392 EM: Round [17] log likelihood: -130350.181283 EM: Round [18] log likelihood: -130349.939991 EM: Round [19] log likelihood: -130349.741482 EM: Round [20] log likelihood: -130349.576713 EM: Round [21] log likelihood: -130349.438805 EM: Round [22] log likelihood: -130349.322467 EM: Round [23] log likelihood: -130349.223588 EM: Round [24] log likelihood: -130349.138949 EM: Round [25] log likelihood: -130349.066007 EM: Round [26] log likelihood: -130349.002740 EM: Round [27] log likelihood: -130348.947527 EM: Round [28] log likelihood: -130348.899063 EM: Round [29] log likelihood: -130348.856287 EM: Round [30] log likelihood: -130348.818335 EM: Round [31] log likelihood: -130348.784496 EM: Round [32] log likelihood: -130348.754185 EM: Round [33] log likelihood: -130348.726916 EM: Round [34] log likelihood: -130348.702281 EM: Round [35] log likelihood: -130348.679942 EM: Round [36] log likelihood: -130348.659611 EM: Round [37] log likelihood: -130348.641045 EM: Round [38] log likelihood: -130348.624038 EM: Round [39] log likelihood: -130348.608412 EM: Round [40] log likelihood: -130348.594017 EM: Round [41] log likelihood: -130348.580721 EM: Round [42] log likelihood: -130348.568411 EM: Round [43] log likelihood: -130348.556988 EM: Round [44] log likelihood: -130348.546367 EM: Round [45] log likelihood: -130348.536471 EM: Round [46] log likelihood: -130348.527234 EM: Round [47] log likelihood: -130348.518598 EM: Round [48] log likelihood: -130348.510510 EM: Round [49] log likelihood: -130348.502925 EM: Round [50] log likelihood: -130348.495801 EM: Round [51] log likelihood: -130348.489101 EM: Round [52] log likelihood: -130348.482793 EM: Round [53] log likelihood: -130348.476846 EM: Round [54] log likelihood: -130348.471233 EM: Round [55] log likelihood: -130348.465930 EM: Round [56] log likelihood: -130348.460916 EM: Round [57] log likelihood: -130348.456169 EM: Round [58] log likelihood: -130348.451673 EM: Round [59] log likelihood: -130348.447409 EM: Round [60] log likelihood: -130348.443362 EM: Round [61] log likelihood: -130348.439520 EM: Round [62] log likelihood: -130348.435868 EM: Round [63] log likelihood: -130348.432396 EM: Round [64] log likelihood: -130348.429091 EM: Round [65] log likelihood: -130348.425944 EM: Round [66] log likelihood: -130348.422946 EM: Round [67] log likelihood: -130348.420087 EM: Round [68] log likelihood: -130348.417361 EM: Round [69] log likelihood: -130348.414759 EM: Round [70] log likelihood: -130348.412275 EM: Round [71] log likelihood: -130348.409901 EM: Round [72] log likelihood: -130348.407633 EM: Round [73] log likelihood: -130348.405464 EM: Round [74] log likelihood: -130348.403389 EM: Round [75] log likelihood: -130348.401403 EM: Round [76] log likelihood: -130348.399502 EM: Round [77] log likelihood: -130348.397682 EM: Round [78] log likelihood: -130348.395937 EM: Round [79] log likelihood: -130348.394265 EM: Round [80] log likelihood: -130348.392662 EM: Round [81] log likelihood: -130348.391124 EM: Round [82] log likelihood: -130348.389649 EM: Round [83] log likelihood: -130348.388233 EM: Round [84] log likelihood: -130348.386873 EM: Round [85] log likelihood: -130348.385567 EM: Round [86] log likelihood: -130348.384312 EM: Round [87] log likelihood: -130348.383107 EM: Round [88] log likelihood: -130348.381948 EM: Round [89] log likelihood: -130348.380833 EM: Round [90] log likelihood: -130348.379761 EM: Round [91] log likelihood: -130348.378730 EM: Round [92] log likelihood: -130348.377738 EM: Round [93] log likelihood: -130348.376782 EM: Round [94] log likelihood: -130348.375862 EM: Round [95] log likelihood: -130348.374977 EM: Round [96] log likelihood: -130348.374123 EM: Round [97] log likelihood: -130348.373301 EM: Round [98] log likelihood: -130348.372508 EM: Round [99] log likelihood: -130348.371743 EM: Round [100] log likelihood: -130348.371006 EM: Round [101] log likelihood: -130348.370296 EM: Round [102] log likelihood: -130348.369610 EM: Round [103] log likelihood: -130348.368948 EM: Round [104] log likelihood: -130348.368309 EM: Round [105] log likelihood: -130348.367692 EM: Round [106] log likelihood: -130348.367097 EM: Round [107] log likelihood: -130348.366521 EM: Round [108] log likelihood: -130348.365965 EM: Round [109] log likelihood: -130348.365428 EM: Round [110] log likelihood: -130348.364909 EM: Round [111] log likelihood: -130348.364407 EM: Round [112] log likelihood: -130348.363922 EM: Round [113] log likelihood: -130348.363452 EM: Round [114] log likelihood: -130348.362998 EM: Round [115] log likelihood: -130348.362559 EM: Round [116] log likelihood: -130348.362133 EM: Round [117] log likelihood: -130348.361722 EM: Round [118] log likelihood: -130348.361323 EM: Round [119] log likelihood: -130348.360937 EM: Round [120] log likelihood: -130348.360563 EM: Round [121] log likelihood: -130348.360201 EM: Round [122] log likelihood: -130348.359850 EM: Round [123] log likelihood: -130348.359509 EM: Round [124] log likelihood: -130348.359179 EM: Round [125] log likelihood: -130348.358860 EM: Round [126] log likelihood: -130348.358549 EM: Round [127] log likelihood: -130348.358248 EM: Round [128] log likelihood: -130348.357956 EM: Round [129] log likelihood: -130348.357673 EM: Round [130] log likelihood: -130348.357398 EM: Round [131] log likelihood: -130348.357130 EM: Round [132] log likelihood: -130348.356871 EM: Round [133] log likelihood: -130348.356619 EM: Round [134] log likelihood: -130348.356374 EM: Round [135] log likelihood: -130348.356136 EM: Round [136] log likelihood: -130348.355905 EM: Round [137] log likelihood: -130348.355681 EM: Round [138] log likelihood: -130348.355462 EM: Round [139] log likelihood: -130348.355250 EM: Round [140] log likelihood: -130348.355043 EM: Round [141] log likelihood: -130348.354842 EM: Round [142] log likelihood: -130348.354646 EM: Round [143] log likelihood: -130348.354456 EM: Round [144] log likelihood: -130348.354270 EM: Round [145] log likelihood: -130348.354090 EM: Round [146] log likelihood: -130348.353914 EM: Round [147] log likelihood: -130348.353743 EM: Round [148] log likelihood: -130348.353576 EM: Round [149] log likelihood: -130348.353413 EM: Round [150] log likelihood: -130348.353255 EM: Round [151] log likelihood: -130348.353101 EM: Round [152] log likelihood: -130348.352950 EM: Round [153] log likelihood: -130348.352803 EM: Round [154] log likelihood: -130348.352660 EM: Round [155] log likelihood: -130348.352520 EM: Round [156] log likelihood: -130348.352384 EM: Round [157] log likelihood: -130348.352251 EM: Round [158] log likelihood: -130348.352121 EM: Round [159] log likelihood: -130348.351994 EM: Round [160] log likelihood: -130348.351870 EM: Round [161] log likelihood: -130348.351749 EM: Round [162] log likelihood: -130348.351631 EM: Round [163] log likelihood: -130348.351516 EM: Round [164] log likelihood: -130348.351403 EM: Round [165] log likelihood: -130348.351293 EM: Round [166] log likelihood: -130348.351185 EM: Round [167] log likelihood: -130348.351080 EM: Round [168] log likelihood: -130348.350976 EM: Round [169] log likelihood: -130348.350876 EM: Round [170] log likelihood: -130348.350777 EM: Stopping iterations at round 170 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 123666762 > /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir > /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir --annotate /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir -done, see /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 546, filtered: 5152) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.8MPK6jhGFh/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.8MPK6jhGFh/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000227632.2] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000196758.3] WARNING, no entry stored in dbm for [ENSG00000264920.2] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000255401.1] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000224366.1] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000251661.3] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000257890.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000246422.2] WARNING, no entry stored in dbm for [ENSG00000254369.6] WARNING, no entry stored in dbm for [ENSG00000167920.10] WARNING, no entry stored in dbm for [ENSG00000204188.7] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000257663.1] WARNING, no entry stored in dbm for [ENSG00000235640.1] WARNING, no entry stored in dbm for [ENSG00000263327.6] WARNING, no entry stored in dbm for [ENSG00000263327.6] WARNING, no entry stored in dbm for [ENSG00000228002.2] WARNING, no entry stored in dbm for [ENSG00000256616.3] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000263934.5] WARNING, no entry stored in dbm for [ENSG00000200318.2] WARNING, no entry stored in dbm for [ENSG00000250980.1] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000285575.1] WARNING, no entry stored in dbm for [ENSG00000279232.2] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000250308.2] WARNING, no entry stored in dbm for [ENSG00000250308.2] WARNING, no entry stored in dbm for [ENSG00000228568.1] WARNING, no entry stored in dbm for [ENSG00000239572.3] WARNING, no entry stored in dbm for [ENSG00000242123.1] WARNING, no entry stored in dbm for [ENSG00000237745.1] WARNING, no entry stored in dbm for [ENSG00000230171.1] WARNING, no entry stored in dbm for [ENSG00000213935.3] WARNING, no entry stored in dbm for [ENSG00000235266.1] WARNING, no entry stored in dbm for [ENSG00000232463.1] WARNING, no entry stored in dbm for [ENSG00000250608.2] WARNING, no entry stored in dbm for [ENSG00000258628.1] WARNING, no entry stored in dbm for [ENSG00000232104.3] WARNING, no entry stored in dbm for [ENSG00000223418.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000270938.1] WARNING, no entry stored in dbm for [ENSG00000282840.1] WARNING, no entry stored in dbm for [ENSG00000196756.13] WARNING, no entry stored in dbm for [ENSG00000256963.1] WARNING, no entry stored in dbm for [ENSG00000285367.1] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000229400.1] WARNING, no entry stored in dbm for [ENSG00000235390.4] WARNING, no entry stored in dbm for [ENSG00000266187.2] WARNING, no entry stored in dbm for [ENSG00000256616.3] WARNING, no entry stored in dbm for [ENSG00000230683.1] WARNING, no entry stored in dbm for [ENSG00000271714.1] WARNING, no entry stored in dbm for [ENSG00000213104.3] WARNING, no entry stored in dbm for [ENSG00000224443.1] WARNING, no entry stored in dbm for [ENSG00000204241.8] WARNING, no entry stored in dbm for [ENSG00000228630.5] WARNING, no entry stored in dbm for [ENSG00000275691.2] WARNING, no entry stored in dbm for [ENSG00000284122.1] WARNING, no entry stored in dbm for [ENSG00000260192.3] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000272690.6] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000249921.2] WARNING, no entry stored in dbm for [ENSG00000237350.1] WARNING, no entry stored in dbm for [ENSG00000241288.8] WARNING, no entry stored in dbm for [ENSG00000204283.4] WARNING, no entry stored in dbm for [ENSG00000204283.4] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000260868.1] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000248441.7] WARNING, no entry stored in dbm for [ENSG00000239589.7] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000260807.7] WARNING, no entry stored in dbm for [ENSG00000225988.1] WARNING, no entry stored in dbm for [ENSG00000287678.1] WARNING, no entry stored in dbm for [ENSG00000229391.7] WARNING, no entry stored in dbm for [ENSG00000254294.1] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [ENSG00000218690.2] WARNING, no entry stored in dbm for [ENSG00000244300.3] WARNING, no entry stored in dbm for [ENSG00000248690.8] WARNING, no entry stored in dbm for [ENSG00000226137.5] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000236289.4] WARNING, no entry stored in dbm for [ENSG00000229256.1] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000240541.3] WARNING, no entry stored in dbm for [ENSG00000283255.1] WARNING, no entry stored in dbm for [ENSG00000232121.1] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000248406.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000213480.3] WARNING, no entry stored in dbm for [ENSG00000248079.3] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000228274.4] WARNING, no entry stored in dbm for [ENSG00000176124.15] WARNING, no entry stored in dbm for [ENSG00000225138.8] WARNING, no entry stored in dbm for [ENSG00000262966.2] WARNING, no entry stored in dbm for [ENSG00000227398.4] WARNING, no entry stored in dbm for [ENSG00000272888.7] WARNING, no entry stored in dbm for [ENSG00000216639.1] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000253616.5] WARNING, no entry stored in dbm for [ENSG00000229256.1] WARNING, no entry stored in dbm for [ENSG00000224750.6] WARNING, no entry stored in dbm for [ENSG00000233230.1] WARNING, no entry stored in dbm for [ENSG00000179428.2] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000244247.2] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000263369.6] WARNING, no entry stored in dbm for [ENSG00000272948.2] WARNING, no entry stored in dbm for [ENSG00000279342.2] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000242894.3] WARNING, no entry stored in dbm for [ENSG00000242757.1] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000265194.1] WARNING, no entry stored in dbm for [ENSG00000286518.1] WARNING, no entry stored in dbm for [ENSG00000224842.2] WARNING, no entry stored in dbm for [ENSG00000286116.1] WARNING, no entry stored in dbm for [ENSG00000235371.1] WARNING, no entry stored in dbm for [ENSG00000280434.1] WARNING, no entry stored in dbm for [ENSG00000228274.4] WARNING, no entry stored in dbm for [ENSG00000276216.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000262187.2] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000238387.1] WARNING, no entry stored in dbm for [ENSG00000239096.1] WARNING, no entry stored in dbm for [ENSG00000249926.2] WARNING, no entry stored in dbm for [ENSG00000279569.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000266208.1] WARNING, no entry stored in dbm for [ENSG00000229256.1] WARNING, no entry stored in dbm for [ENSG00000261501.1] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000285606.1] WARNING, no entry stored in dbm for [ENSG00000259433.2] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000230572.5] WARNING, no entry stored in dbm for [ENSG00000257764.2] WARNING, no entry stored in dbm for [ENSG00000231409.3] WARNING, no entry stored in dbm for [ENSG00000235619.1] WARNING, no entry stored in dbm for [ENSG00000257453.1] WARNING, no entry stored in dbm for [ENSG00000266978.1] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000229689.3] WARNING, no entry stored in dbm for [ENSG00000249494.6] WARNING, no entry stored in dbm for [ENSG00000284513.1] WARNING, no entry stored in dbm for [ENSG00000250132.6] WARNING, no entry stored in dbm for [ENSG00000244230.3] WARNING, no entry stored in dbm for [ENSG00000262001.1] * STAR-Fusion complete. See output: /tmp/nxf.8MPK6jhGFh/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)