.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (FFPE_V4_0001_RNA_0001_B23LG7FLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/aab002f35dad27e94efce7582e07c1/.command.log
Size: 24.2 KB
Task: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (FFPE_V4_0001_RNA_0001_B23LG7FLT4_2)
Attempt
Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/aab002f35dad27e94efce7582e07c1/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/arriba/cytobands_hg38_GRCh38_v2.4.0.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/521bad1e075b07d4f0efe8a3ec9242/FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b4/3a15a4f33c50e25a32aff362e63414/FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.FusionInspector.fusions.tsv
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_annot.gtf
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/arriba/protein_domains_hg38_GRCh38_v2.4.0.gff3
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/aab002f35dad27e94efce7582e07c1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/512a84b3e1a0cdf3da546c4cea9467/FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (8 inputs)

Loading annotation
Read 3041209 records
Warning in parseGtfAttribute("exon_number", exons) :
  Failed to parse 'exon_number' attribute of 8 record(s).
Loading protein domains
Read 134356 records
Drawing fusion #1: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #2: FGFR3:TACC3
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #3: TMPRSS2:ERG
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #4: TPM3:NTRK1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #5: LMNA:NTRK1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #6: FGFR3:BAIAP2L1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #7: ETV6:NTRK3
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #8: ETV6:NTRK3
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #9: NCOA4:RET
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #10: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #11: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #12: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #13: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #14: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #15: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #16: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #17: CD74:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #18: CCDC6:RET
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #19: KIF5B:RET
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #20: KIF5B:RET
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #21: EML4:ALK
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #22: PAX8:PPARG
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #23: PAX8:PPARG
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #24: PAX8:PPARG
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #25: SLC45A3:BRAF
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #26: SLC34A2:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #27: SLC34A2:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #28: SLC34A2:ROS1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #29: EGFR:SEPTIN14
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #30: TFG:NTRK1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #31: STX16:NPEPL1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #32: STX16:NPEPL1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #33: TLK2:AC240565.1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #34: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #35: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #36: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #37: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #38: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #39: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #40: TVP23C:CDRT4
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #41: TLK2P1:AC110079.1
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Drawing fusion #42: SOGA3:KIAA0408
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
[W::hts_idx_load3] The index file is older than the data file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai
Done