-ctat genome lib [/tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.BmDTZeqo84/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary
-sample contains 33064515 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir -J /tmp/nxf.BmDTZeqo84/BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.BmDTZeqo84/BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
[10000], rate=12765.96/min
[20000], rate=15384.62/min
[30000], rate=16363.64/min
[40000], rate=17391.30/min
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[60000], rate=18556.70/min
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[100000], rate=19543.97/min
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[660000], rate=45051.19/min
[670000], rate=45423.73/min
[680000], rate=45688.69/min
[690000], rate=45948.95/min
[700000], rate=46306.50/min
[710000], rate=46608.32/min
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[780000], rate=43861.29/min
[790000], rate=43726.94/min -building interval tree based on /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
[10000], rate=33333.33/min
[20000], rate=35294.12/min
[30000], rate=37500.00/min
[40000], rate=39344.26/min
[50000], rate=33333.33/min
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[70000], rate=31111.11/min
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[100000], rate=25641.03/min
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[750000], rate=38461.54/min
[760000], rate=38775.51/min
[770000], rate=39086.29/min
[780000], rate=39228.83/min -building interval tree based on /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=23076.92/min
[20000], rate=20000.00/min
[30000], rate=19780.22/min
[40000], rate=20000.00/min
[50000], rate=21739.13/min
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[100000], rate=25862.07/min
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[750000], rate=37344.40/min
[760000], rate=37530.86/min
[770000], rate=37652.81/min
[780000], rate=37201.91/min -building interval tree based on /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
[10000], rate=46153.85/min
[20000], rate=52173.91/min
[30000], rate=47368.42/min
[40000], rate=53333.33/min
[50000], rate=55555.56/min
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[100000], rate=59405.94/min
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[680000], rate=34056.76/min
[690000], rate=33990.15/min
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[750000], rate=33632.29/min
[760000], rate=33554.08/min
[770000], rate=33575.58/min
[780000], rate=33380.88/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir --filt_file /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
4500000.00 reads per min processed...
3428571.43 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3085714.29 reads per min processed...
3166666.67 reads per min processed...
3243243.24 reads per min processed...
3230769.23 reads per min processed...
3219512.20 reads per min processed...
3209302.33 reads per min processed...
3200000.00 reads per min processed...
3260869.57 reads per min processed...
3250000.00 reads per min processed...
3240000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.BmDTZeqo84/BreastNP_FFPE_L03_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -48868.252451
EM: Round [1] log likelihood: -48750.890590
EM: Round [2] log likelihood: -48699.826139
EM: Round [3] log likelihood: -48673.305331
EM: Round [4] log likelihood: -48658.545335
EM: Round [5] log likelihood: -48650.071203
EM: Round [6] log likelihood: -48645.079511
EM: Round [7] log likelihood: -48642.048251
EM: Round [8] log likelihood: -48640.141512
EM: Round [9] log likelihood: -48638.897228
EM: Round [10] log likelihood: -48638.055979
EM: Round [11] log likelihood: -48637.468464
EM: Round [12] log likelihood: -48637.046126
EM: Round [13] log likelihood: -48636.734725
EM: Round [14] log likelihood: -48636.499967
EM: Round [15] log likelihood: -48636.319508
EM: Round [16] log likelihood: -48636.178382
EM: Round [17] log likelihood: -48636.066315
EM: Round [18] log likelihood: -48635.976095
EM: Round [19] log likelihood: -48635.902562
EM: Round [20] log likelihood: -48635.841960
EM: Round [21] log likelihood: -48635.791509
EM: Round [22] log likelihood: -48635.749127
EM: Round [23] log likelihood: -48635.713231
EM: Round [24] log likelihood: -48635.682603
EM: Round [25] log likelihood: -48635.656298
EM: Round [26] log likelihood: -48635.633569
EM: Round [27] log likelihood: -48635.613826
EM: Round [28] log likelihood: -48635.596593
EM: Round [29] log likelihood: -48635.581487
EM: Round [30] log likelihood: -48635.568193
EM: Round [31] log likelihood: -48635.556453
EM: Round [32] log likelihood: -48635.546051
EM: Round [33] log likelihood: -48635.536809
EM: Round [34] log likelihood: -48635.528575
EM: Round [35] log likelihood: -48635.521221
EM: Round [36] log likelihood: -48635.514638
EM: Round [37] log likelihood: -48635.508733
EM: Round [38] log likelihood: -48635.503425
EM: Round [39] log likelihood: -48635.498646
EM: Round [40] log likelihood: -48635.494335
EM: Round [41] log likelihood: -48635.490439
EM: Round [42] log likelihood: -48635.486914
EM: Round [43] log likelihood: -48635.483719
EM: Round [44] log likelihood: -48635.480818
EM: Round [45] log likelihood: -48635.478182
EM: Round [46] log likelihood: -48635.475782
EM: Round [47] log likelihood: -48635.473594
EM: Round [48] log likelihood: -48635.471598
EM: Round [49] log likelihood: -48635.469773
EM: Round [50] log likelihood: -48635.468104
EM: Round [51] log likelihood: -48635.466574
EM: Round [52] log likelihood: -48635.465171
EM: Round [53] log likelihood: -48635.463882
EM: Round [54] log likelihood: -48635.462698
EM: Round [55] log likelihood: -48635.461607
EM: Round [56] log likelihood: -48635.460602
EM: Round [57] log likelihood: -48635.459674
EM: Round [58] log likelihood: -48635.458817
EM: Round [59] log likelihood: -48635.458024
EM: Round [60] log likelihood: -48635.457291
EM: Round [61] log likelihood: -48635.456611
EM: Round [62] log likelihood: -48635.455979
EM: Round [63] log likelihood: -48635.455393
EM: Round [64] log likelihood: -48635.454848
EM: Round [65] log likelihood: -48635.454340
EM: Round [66] log likelihood: -48635.453867
EM: Round [67] log likelihood: -48635.453426
EM: Round [68] log likelihood: -48635.453014
EM: Round [69] log likelihood: -48635.452629
EM: Round [70] log likelihood: -48635.452269
EM: Round [71] log likelihood: -48635.451931
EM: Round [72] log likelihood: -48635.451615
EM: Round [73] log likelihood: -48635.451318
EM: Round [74] log likelihood: -48635.451039
EM: Round [75] log likelihood: -48635.450776
EM: Round [76] log likelihood: -48635.450530
EM: Round [77] log likelihood: -48635.450297
EM: Round [78] log likelihood: -48635.450078
EM: Round [79] log likelihood: -48635.449871
EM: Round [80] log likelihood: -48635.449676
EM: Round [81] log likelihood: -48635.449492
EM: Round [82] log likelihood: -48635.449317
EM: Round [83] log likelihood: -48635.449152
EM: Round [84] log likelihood: -48635.448995
EM: Round [85] log likelihood: -48635.448847
EM: Round [86] log likelihood: -48635.448706
EM: Round [87] log likelihood: -48635.448573
EM: Round [88] log likelihood: -48635.448446
EM: Round [89] log likelihood: -48635.448325
EM: Round [90] log likelihood: -48635.448211
EM: Round [91] log likelihood: -48635.448101
EM: Round [92] log likelihood: -48635.447997
EM: Round [93] log likelihood: -48635.447898
EM: Stopping iterations at round 93 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -48804.140024
EM: Round [1] log likelihood: -48702.492977
EM: Round [2] log likelihood: -48659.365448
EM: Round [3] log likelihood: -48637.220038
EM: Round [4] log likelihood: -48625.006033
EM: Round [5] log likelihood: -48618.065163
EM: Round [6] log likelihood: -48614.023392
EM: Round [7] log likelihood: -48611.597652
EM: Round [8] log likelihood: -48610.088035
EM: Round [9] log likelihood: -48609.111259
EM: Round [10] log likelihood: -48608.454637
EM: Round [11] log likelihood: -48607.997377
EM: Round [12] log likelihood: -48607.668796
EM: Round [13] log likelihood: -48607.426137
EM: Round [14] log likelihood: -48607.242650
EM: Round [15] log likelihood: -48607.101042
EM: Round [16] log likelihood: -48606.989796
EM: Round [17] log likelihood: -48606.901031
EM: Round [18] log likelihood: -48606.829222
EM: Round [19] log likelihood: -48606.770415
EM: Round [20] log likelihood: -48606.721726
EM: Round [21] log likelihood: -48606.681018
EM: Round [22] log likelihood: -48606.646684
EM: Round [23] log likelihood: -48606.617497
EM: Round [24] log likelihood: -48606.592510
EM: Round [25] log likelihood: -48606.570983
EM: Round [26] log likelihood: -48606.552333
EM: Round [27] log likelihood: -48606.536091
EM: Round [28] log likelihood: -48606.521883
EM: Round [29] log likelihood: -48606.509403
EM: Round [30] log likelihood: -48606.498398
EM: Round [31] log likelihood: -48606.488663
EM: Round [32] log likelihood: -48606.480023
EM: Round [33] log likelihood: -48606.472333
EM: Round [34] log likelihood: -48606.465472
EM: Round [35] log likelihood: -48606.459334
EM: Round [36] log likelihood: -48606.453832
EM: Round [37] log likelihood: -48606.448888
EM: Round [38] log likelihood: -48606.444438
EM: Round [39] log likelihood: -48606.440424
EM: Round [40] log likelihood: -48606.436797
EM: Round [41] log likelihood: -48606.433514
EM: Round [42] log likelihood: -48606.430537
EM: Round [43] log likelihood: -48606.427834
EM: Round [44] log likelihood: -48606.425375
EM: Round [45] log likelihood: -48606.423136
EM: Round [46] log likelihood: -48606.421093
EM: Round [47] log likelihood: -48606.419226
EM: Round [48] log likelihood: -48606.417519
EM: Round [49] log likelihood: -48606.415954
EM: Round [50] log likelihood: -48606.414519
EM: Round [51] log likelihood: -48606.413201
EM: Round [52] log likelihood: -48606.411988
EM: Round [53] log likelihood: -48606.410871
EM: Round [54] log likelihood: -48606.409842
EM: Round [55] log likelihood: -48606.408891
EM: Round [56] log likelihood: -48606.408012
EM: Round [57] log likelihood: -48606.407198
EM: Round [58] log likelihood: -48606.406444
EM: Round [59] log likelihood: -48606.405745
EM: Round [60] log likelihood: -48606.405095
EM: Round [61] log likelihood: -48606.404491
EM: Round [62] log likelihood: -48606.403928
EM: Round [63] log likelihood: -48606.403404
EM: Round [64] log likelihood: -48606.402915
EM: Round [65] log likelihood: -48606.402458
EM: Round [66] log likelihood: -48606.402031
EM: Round [67] log likelihood: -48606.401631
EM: Round [68] log likelihood: -48606.401256
EM: Round [69] log likelihood: -48606.400905
EM: Round [70] log likelihood: -48606.400575
EM: Round [71] log likelihood: -48606.400265
EM: Round [72] log likelihood: -48606.399973
EM: Round [73] log likelihood: -48606.399699
EM: Round [74] log likelihood: -48606.399440
EM: Round [75] log likelihood: -48606.399197
EM: Round [76] log likelihood: -48606.398966
EM: Round [77] log likelihood: -48606.398749
EM: Round [78] log likelihood: -48606.398543
EM: Round [79] log likelihood: -48606.398349
EM: Round [80] log likelihood: -48606.398165
EM: Round [81] log likelihood: -48606.397990
EM: Round [82] log likelihood: -48606.397825
EM: Round [83] log likelihood: -48606.397668
EM: Round [84] log likelihood: -48606.397518
EM: Round [85] log likelihood: -48606.397377
EM: Round [86] log likelihood: -48606.397242
EM: Round [87] log likelihood: -48606.397114
EM: Round [88] log likelihood: -48606.396992
EM: Round [89] log likelihood: -48606.396875
EM: Round [90] log likelihood: -48606.396765
EM: Round [91] log likelihood: -48606.396659
EM: Round [92] log likelihood: -48606.396558
EM: Round [93] log likelihood: -48606.396462
EM: Stopping iterations at round 93 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 33064515 > /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir > /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir --annotate /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir
-done, see /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 199, filtered: 2689)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.BmDTZeqo84/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.BmDTZeqo84/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000287991.1]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000274376.4]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000270964.1]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000248956.1]
WARNING, no entry stored in dbm for [ENSG00000286288.1]
WARNING, no entry stored in dbm for [ENSG00000272668.2]
WARNING, no entry stored in dbm for [ENSG00000235065.1]
WARNING, no entry stored in dbm for [ENSG00000244237.1]
WARNING, no entry stored in dbm for [ENSG00000231322.5]
WARNING, no entry stored in dbm for [ENSG00000251889.1]
WARNING, no entry stored in dbm for [ENSG00000201806.1]
WARNING, no entry stored in dbm for [ENSG00000239742.3]
WARNING, no entry stored in dbm for [ENSG00000239437.3]
WARNING, no entry stored in dbm for [ENSG00000239742.3]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000243541.3]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000222259.1]
WARNING, no entry stored in dbm for [ENSG00000202058.1]
WARNING, no entry stored in dbm for [ENSG00000287218.1]
WARNING, no entry stored in dbm for [ENSG00000276255.2]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000233997.5]
WARNING, no entry stored in dbm for [ENSG00000249673.7]
WARNING, no entry stored in dbm for [ENSG00000286641.1]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000263146.2]
WARNING, no entry stored in dbm for [ENSG00000287356.1]
WARNING, no entry stored in dbm for [ENSG00000234199.3]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000242628.6]
WARNING, no entry stored in dbm for [ENSG00000248890.2]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000273420.1]
WARNING, no entry stored in dbm for [ENSG00000230335.1]
WARNING, no entry stored in dbm for [ENSG00000224415.1]
WARNING, no entry stored in dbm for [ENSG00000268812.3]
WARNING, no entry stored in dbm for [ENSG00000262966.2]
WARNING, no entry stored in dbm for [ENSG00000277047.5]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000258561.2]
WARNING, no entry stored in dbm for [ENSG00000225032.5]
WARNING, no entry stored in dbm for [ENSG00000274993.1]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000235908.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000279057.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000285108.1]
WARNING, no entry stored in dbm for [ENSG00000287007.1]
WARNING, no entry stored in dbm for [ENSG00000253973.3]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000266830.1]
WARNING, no entry stored in dbm for [ENSG00000234773.7]
WARNING, no entry stored in dbm for [ENSG00000248830.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000250614.1]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
* STAR-Fusion complete. See output: /tmp/nxf.BmDTZeqo84/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)