-ctat genome lib [/tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.hginCsZoAb/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.hginCsZoAb/./star-fusion.preliminary -sample contains 170947118 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir -J /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=70588.24/min [30000], rate=72000.00/min [40000], rate=72727.27/min [50000], rate=69767.44/min [60000], rate=70588.24/min [70000], rate=71186.44/min [80000], rate=72727.27/min [90000], rate=73972.60/min [100000], rate=76923.08/min [110000], rate=78571.43/min [120000], rate=80898.88/min [130000], rate=82978.72/min [140000], rate=84848.48/min [150000], rate=86538.46/min [160000], rate=87272.73/min [170000], rate=87931.03/min [180000], rate=84375.00/min [190000], rate=82014.39/min [200000], rate=79470.20/min [210000], rate=76829.27/min [220000], rate=73743.02/min [230000], rate=71502.59/min [240000], rate=68899.52/min [250000], rate=67567.57/min [260000], rate=66666.67/min [270000], rate=65322.58/min [280000], rate=64615.38/min [290000], rate=63736.26/min [300000], rate=63380.28/min [310000], rate=62837.84/min [320000], rate=62337.66/min [330000], rate=62264.15/min [340000], rate=62195.12/min [350000], rate=61946.90/min [360000], rate=61891.12/min [370000], rate=61157.02/min [380000], rate=60962.57/min [390000], rate=60779.22/min [400000], rate=61068.70/min [410000], rate=61346.63/min [420000], rate=61463.41/min [430000], rate=61722.49/min [440000], rate=62117.65/min [450000], rate=62068.97/min [460000], rate=61883.41/min [470000], rate=62114.54/min [480000], rate=62337.66/min [490000], rate=62420.38/min [500000], rate=63157.89/min [510000], rate=63354.04/min [520000], rate=63673.47/min [530000], rate=64372.47/min [540000], rate=64670.66/min [550000], rate=64705.88/min [560000], rate=64864.86/min [570000], rate=65019.01/min [580000], rate=65168.54/min [590000], rate=65313.65/min [600000], rate=65573.77/min [610000], rate=65827.34/min [620000], rate=66074.60/min [630000], rate=66432.34/min [640000], rate=66782.61/min [650000], rate=67241.38/min [660000], rate=67692.31/min [670000], rate=68251.27/min [680000], rate=68802.70/min [690000], rate=69696.97/min [700000], rate=70234.11/min [710000], rate=70646.77/min [720000], rate=71169.69/min [730000], rate=71568.63/min [740000], rate=71961.10/min [750000], rate=72347.27/min [760000], rate=72843.45/min [770000], rate=73333.33/min [780000], rate=73933.65/min [790000], rate=74528.30/min [800000], rate=74883.00/min [810000], rate=75465.84/min [820000], rate=75808.94/min [830000], rate=75914.63/min [840000], rate=75903.61/min [850000], rate=76119.40/min [860000], rate=76444.44/min [870000], rate=76764.71/min [880000], rate=76967.93/min [890000], rate=77279.31/min [900000], rate=77474.89/min [910000], rate=77888.73/min [920000], rate=78186.97/min [930000], rate=78591.55/min [940000], rate=78991.60/min [950000], rate=79387.19/min [960000], rate=79778.39/min [970000], rate=80055.02/min [980000], rate=80437.76/min [990000], rate=80816.33/min [1000000], rate=81081.08/min [1010000], rate=81342.28/min [1020000], rate=81708.95/min [1030000], rate=82071.71/min [1040000], rate=82430.65/min [1050000], rate=82677.17/min [1060000], rate=83246.07/min [1070000], rate=83485.05/min [1080000], rate=83720.93/min [1090000], rate=84061.70/min [1100000], rate=84615.38/min [1110000], rate=84948.98/min [1120000], rate=85387.55/min [1130000], rate=85822.78/min [1140000], rate=86146.10/min [1150000], rate=86466.17/min [1160000], rate=86783.04/min [1170000], rate=87313.43/min [1180000], rate=87841.19/min [1190000], rate=88475.84/min [1200000], rate=89108.91/min [1210000], rate=89740.42/min [1220000], rate=90147.78/min [1230000], rate=90109.89/min [1240000], rate=89855.07/min [1250000], rate=90361.45/min [1260000], rate=90974.73/min [1270000], rate=91257.49/min [1280000], rate=91646.78/min [1290000], rate=92142.86/min [1300000], rate=92417.06/min [1310000], rate=92688.68/min [1320000], rate=92957.75/min [1330000], rate=93442.62/min [1340000], rate=94035.09/min [1350000], rate=94626.17/min [1360000], rate=95215.87/min [1370000], rate=95470.38/min [1380000], rate=95612.01/min [1390000], rate=95642.20/min [1400000], rate=95563.14/min [1410000], rate=95377.68/min [1420000], rate=95515.70/min [1430000], rate=95865.92/min [1440000], rate=95893.45/min [1450000], rate=96026.49/min [1460000], rate=96263.74/min [1470000], rate=96393.44/min [1480000], rate=96626.77/min [1490000], rate=97068.40/min [1500000], rate=97402.60/min [1510000], rate=97945.95/min [1520000], rate=98488.12/min [1530000], rate=98603.65/min [1540000], rate=98507.46/min [1550000], rate=97997.89/min [1560000], rate=98319.33/min [1570000], rate=98845.75/min [1580000], rate=98956.16/min [1590000], rate=99271.59/min [1600000], rate=99378.88/min [1610000], rate=99485.07/min [1620000], rate=100000.00/min [1630000], rate=100204.92/min [1640000], rate=100510.73/min [1650000], rate=100814.66/min [1660000], rate=100911.85/min [1670000], rate=101008.06/min [1680000], rate=101204.82/min [1690000], rate=101501.50/min [1700000], rate=102000.00/min [1710000], rate=102497.50/min [1720000], rate=102994.01/min [1730000], rate=103386.45/min [1740000], rate=103468.78/min [1750000], rate=103143.42/min [1760000], rate=103225.81/min [1770000], rate=103710.94/min [1780000], rate=103992.21/min [1790000], rate=104170.71/min [1800000], rate=104549.85/min [1810000], rate=104624.28/min [1820000], rate=104899.14/min [1830000], rate=104971.32/min [1840000], rate=105243.09/min [1850000], rate=105513.31/min [1860000], rate=105982.91/min [1870000], rate=106451.61/min [1880000], rate=107020.87/min [1890000], rate=107488.15/min [1900000], rate=107954.55/min [1910000], rate=108522.73/min [1920000], rate=108987.70/min [1930000], rate=109039.55/min [1940000], rate=109090.91/min [1950000], rate=109040.07/min [1960000], rate=108888.89/min [1970000], rate=108539.94/min [1980000], rate=108493.15/min [1990000], rate=108644.22/min [2000000], rate=108597.29/min [2010000], rate=108648.65/min [2020000], rate=108504.92/min [2030000], rate=108847.18/min [2040000], rate=108800.00/min [2050000], rate=108945.97/min [2060000], rate=108898.68/min [2070000], rate=108756.57/min [2080000], rate=108521.74/min [2090000], rate=108383.75/min [2100000], rate=108714.41/min [2110000], rate=109137.93/min [2120000], rate=109560.72/min [2130000], rate=109605.49/min [2140000], rate=109837.47/min [2150000], rate=109974.42/min [2160000], rate=110204.08/min [2170000], rate=110152.28/min [2180000], rate=110286.68/min [2190000], rate=110606.06/min [2200000], rate=111017.66/min [2210000], rate=111428.57/min [2220000], rate=111838.79/min [2230000], rate=111872.91/min [2240000], rate=112186.98/min [2250000], rate=112126.25/min [2260000], rate=111973.58/min [2270000], rate=112006.58/min [2280000], rate=112039.31/min [2290000], rate=112163.27/min [2300000], rate=112286.41/min [2310000], rate=112500.00/min [2320000], rate=112621.36/min [2330000], rate=112741.94/min [2340000], rate=112590.22/min [2350000], rate=112529.93/min [2360000], rate=112291.83/min [2370000], rate=112233.62/min [2380000], rate=112087.91/min [2390000], rate=112031.25/min [2400000], rate=112062.26/min [2410000], rate=112093.02/min [2420000], rate=112037.04/min [2430000], rate=111981.57/min [2440000], rate=112098.01/min [2450000], rate=112213.74/min [2460000], rate=112243.35/min [2470000], rate=112187.74/min [2480000], rate=112217.19/min [2490000], rate=112330.83/min [2500000], rate=112359.55/min [2510000], rate=112471.99/min [2520000], rate=112500.00/min [2530000], rate=112527.80/min [2540000], rate=112555.39/min [2550000], rate=112582.78/min [2560000], rate=112609.97/min [2570000], rate=112308.81/min [2580000], rate=111768.95/min [2590000], rate=111238.37/min [2600000], rate=110716.82/min [2610000], rate=110359.41/min [2620000], rate=109930.07/min [2630000], rate=109583.33/min [2640000], rate=109241.38/min [2650000], rate=108755.13/min [2660000], rate=108423.91/min [2670000], rate=108170.16/min [2680000], rate=107847.08/min [2690000], rate=107456.72/min [2700000], rate=107072.04/min [2710000], rate=106692.91/min [2720000], rate=106457.93/min [2730000], rate=106088.08/min [2740000], rate=105859.63/min [2750000], rate=105701.47/min [2760000], rate=105612.24/min [2770000], rate=105523.81/min [2780000], rate=105436.16/min [2790000], rate=105283.02/min [2800000], rate=105197.24/min [2810000], rate=105046.73/min [2820000], rate=105027.93/min [2830000], rate=104814.81/min -building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=133333.33/min [30000], rate=120000.00/min [40000], rate=100000.00/min [50000], rate=93750.00/min [60000], rate=109090.91/min [70000], rate=107692.31/min [80000], rate=109090.91/min [90000], rate=110204.08/min [100000], rate=111111.11/min [110000], rate=113793.10/min [120000], rate=116129.03/min [130000], rate=116417.91/min [140000], rate=110526.32/min [150000], rate=105882.35/min [160000], rate=102127.66/min [170000], rate=102000.00/min [180000], rate=106930.69/min [190000], rate=112871.29/min [200000], rate=114285.71/min [210000], rate=116666.67/min [220000], rate=118918.92/min [230000], rate=120000.00/min [240000], rate=121008.40/min [250000], rate=120000.00/min [260000], rate=122834.65/min [270000], rate=125581.40/min [280000], rate=129230.77/min [290000], rate=133846.15/min [300000], rate=138461.54/min [310000], rate=141984.73/min [320000], rate=145454.55/min [330000], rate=147761.19/min [340000], rate=148905.11/min [350000], rate=147887.32/min [360000], rate=146938.78/min [370000], rate=140506.33/min [380000], rate=136526.95/min [390000], rate=136842.11/min [400000], rate=136363.64/min [410000], rate=135911.60/min [420000], rate=136216.22/min [430000], rate=135789.47/min [440000], rate=136787.56/min [450000], rate=137055.84/min [460000], rate=138000.00/min [470000], rate=136231.88/min [480000], rate=134579.44/min [490000], rate=131838.57/min [500000], rate=131578.95/min [510000], rate=133624.45/min [520000], rate=136244.54/min [530000], rate=137068.97/min [540000], rate=138461.54/min [550000], rate=139240.51/min [560000], rate=139419.09/min [570000], rate=140163.93/min [580000], rate=140322.58/min [590000], rate=142168.67/min [600000], rate=144000.00/min [610000], rate=145816.73/min [620000], rate=148207.17/min [630000], rate=150597.61/min [640000], rate=152380.95/min [650000], rate=154761.90/min [660000], rate=155905.51/min [670000], rate=155813.95/min [680000], rate=156321.84/min [690000], rate=156226.42/min [700000], rate=154981.55/min [710000], rate=153237.41/min [720000], rate=151048.95/min [730000], rate=152083.33/min [740000], rate=152054.79/min [750000], rate=151515.15/min [760000], rate=151495.02/min [770000], rate=150980.39/min [780000], rate=151948.05/min [790000], rate=152903.23/min [800000], rate=153846.15/min [810000], rate=153312.30/min [820000], rate=151851.85/min [830000], rate=150453.17/min [840000], rate=148235.29/min [850000], rate=148255.81/min [860000], rate=150000.00/min [870000], rate=151304.35/min [880000], rate=150857.14/min [890000], rate=152136.75/min [900000], rate=152542.37/min [910000], rate=152513.97/min [920000], rate=152066.12/min [930000], rate=152459.02/min [940000], rate=153678.47/min [950000], rate=154471.54/min [960000], rate=154838.71/min [970000], rate=155614.97/min [980000], rate=155145.12/min [990000], rate=154687.50/min [1000000], rate=153846.15/min [1010000], rate=151879.70/min [1020000], rate=151111.11/min [1030000], rate=151470.59/min [1040000], rate=151089.59/min [1050000], rate=151079.14/min [1060000], rate=150710.90/min [1070000], rate=151773.05/min [1080000], rate=152470.59/min [1090000], rate=153161.59/min [1100000], rate=153132.25/min [1110000], rate=152402.75/min [1120000], rate=151693.00/min [1130000], rate=150000.00/min [1140000], rate=150000.00/min [1150000], rate=150984.68/min [1160000], rate=151965.07/min [1170000], rate=151948.05/min [1180000], rate=152586.21/min [1190000], rate=152890.79/min [1200000], rate=153518.12/min [1210000], rate=153164.56/min [1220000], rate=153781.51/min [1230000], rate=154716.98/min [1240000], rate=155000.00/min [1250000], rate=151821.86/min [1260000], rate=147368.42/min [1270000], rate=143773.58/min [1280000], rate=140917.43/min [1290000], rate=138214.29/min [1300000], rate=135416.67/min [1310000], rate=133220.34/min [1320000], rate=131125.83/min [1330000], rate=129126.21/min [1340000], rate=127014.22/min [1350000], rate=125000.00/min [1360000], rate=123449.32/min [1370000], rate=121777.78/min [1380000], rate=120348.84/min [1390000], rate=118803.42/min [1400000], rate=117482.52/min [1410000], rate=116208.79/min [1420000], rate=115135.14/min [1430000], rate=113944.22/min [1440000], rate=112941.18/min [1450000], rate=111969.11/min [1460000], rate=110886.08/min [1470000], rate=109838.11/min [1480000], rate=108823.53/min [1490000], rate=107971.01/min [1500000], rate=107142.86/min [1510000], rate=106462.98/min [1520000], rate=105800.46/min [1530000], rate=105154.64/min [1540000], rate=104643.26/min [1550000], rate=104026.85/min [1560000], rate=103539.82/min [1570000], rate=103063.46/min [1580000], rate=102265.37/min [1590000], rate=101597.44/min [1600000], rate=100946.37/min [1610000], rate=100625.00/min [1620000], rate=100309.60/min [1630000], rate=100000.00/min [1640000], rate=99494.44/min [1650000], rate=99099.10/min [1660000], rate=98711.60/min [1670000], rate=98525.07/min [1680000], rate=98149.95/min [1690000], rate=97971.01/min [1700000], rate=97701.15/min [1710000], rate=97435.90/min [1720000], rate=97175.14/min [1730000], rate=97009.35/min [1740000], rate=96666.67/min [1750000], rate=96418.73/min [1760000], rate=96000.00/min [1770000], rate=95761.95/min [1780000], rate=95272.08/min [1790000], rate=95044.25/min [1800000], rate=94736.84/min [1810000], rate=94599.30/min [1820000], rate=94545.45/min [1830000], rate=94573.64/min [1840000], rate=94520.55/min [1850000], rate=94548.55/min [1860000], rate=94576.27/min [1870000], rate=94603.71/min [1880000], rate=94551.55/min [1890000], rate=94578.82/min [1900000], rate=94684.39/min [1910000], rate=94710.74/min [1920000], rate=94814.81/min [1930000], rate=94918.03/min [1940000], rate=94942.90/min [1950000], rate=95044.68/min [1960000], rate=95145.63/min [1970000], rate=95322.58/min [1980000], rate=95421.69/min [1990000], rate=95367.41/min [2000000], rate=95162.57/min [2010000], rate=94960.63/min [2020000], rate=94835.68/min [2030000], rate=94712.29/min [2040000], rate=94663.57/min [2050000], rate=94542.66/min [2060000], rate=94423.22/min [2070000], rate=94376.90/min [2080000], rate=94402.42/min [2090000], rate=94356.66/min [2100000], rate=94311.38/min [2110000], rate=94266.57/min [2120000], rate=94222.22/min [2130000], rate=94178.33/min [2140000], rate=94203.96/min [2150000], rate=94298.25/min [2160000], rate=94323.14/min [2170000], rate=94416.24/min [2180000], rate=94440.43/min [2190000], rate=94532.37/min [2200000], rate=94623.66/min [2210000], rate=94646.68/min [2220000], rate=94804.27/min [2230000], rate=94893.62/min [2240000], rate=94915.25/min [2250000], rate=95070.42/min [2260000], rate=95157.89/min [2270000], rate=95244.76/min [2280000], rate=95331.01/min [2290000], rate=95549.37/min [2300000], rate=95766.83/min [2310000], rate=95916.96/min [2320000], rate=96066.25/min [2330000], rate=95426.62/min [2340000], rate=95057.55/min [2350000], rate=94694.43/min [2360000], rate=94337.11/min [2370000], rate=94109.86/min [2380000], rate=93947.37/min [2390000], rate=93664.27/min [2400000], rate=93445.81/min [2410000], rate=93290.32/min [2420000], rate=93136.63/min [2430000], rate=93044.03/min [2440000], rate=92893.40/min [2450000], rate=92744.48/min [2460000], rate=92597.24/min [2470000], rate=92451.65/min [2480000], rate=92364.99/min [2490000], rate=92165.33/min [2500000], rate=91968.12/min [2510000], rate=91829.27/min [2520000], rate=91636.36/min [2530000], rate=91500.90/min [2540000], rate=91366.91/min [2550000], rate=91234.35/min [2560000], rate=91103.20/min [2570000], rate=91027.15/min [2580000], rate=90845.07/min [2590000], rate=90718.04/min [2600000], rate=90644.97/min [2610000], rate=90625.00/min [2620000], rate=90553.00/min [2630000], rate=90533.56/min [2640000], rate=90566.04/min [2650000], rate=90649.94/min [2660000], rate=90-building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=63157.89/min [30000], rate=64285.71/min [40000], rate=66666.67/min [50000], rate=66666.67/min [60000], rate=69230.77/min [70000], rate=71186.44/min [80000], rate=73846.15/min [90000], rate=76056.34/min [100000], rate=77922.08/min [110000], rate=79518.07/min [120000], rate=81818.18/min [130000], rate=81250.00/min [140000], rate=82352.94/min [150000], rate=80357.14/min [160000], rate=78048.78/min [170000], rate=75000.00/min [180000], rate=73469.39/min [190000], rate=71698.11/min [200000], rate=71428.57/min [210000], rate=70786.52/min [220000], rate=70212.77/min [230000], rate=69346.73/min [240000], rate=69230.77/min [250000], rate=68807.34/min [260000], rate=68722.47/min [270000], rate=68644.07/min [280000], rate=69135.80/min [290000], rate=69879.52/min [300000], rate=70038.91/min [310000], rate=70722.43/min [320000], rate=71375.46/min [330000], rate=72262.77/min [340000], rate=73118.28/min [350000], rate=74204.95/min [360000], rate=75261.32/min [370000], rate=76288.66/min [380000], rate=77288.14/min [390000], rate=76973.68/min [400000], rate=76433.12/min [410000], rate=75460.12/min [420000], rate=75223.88/min [430000], rate=74782.61/min [440000], rate=74787.54/min [450000], rate=74380.17/min [460000], rate=74193.55/min [470000], rate=74015.75/min [480000], rate=73846.15/min [490000], rate=73869.35/min [500000], rate=73529.41/min [510000], rate=73381.29/min [520000], rate=73411.76/min [530000], rate=73781.90/min [540000], rate=73972.60/min [550000], rate=73991.03/min [560000], rate=74172.19/min [570000], rate=74672.49/min [580000], rate=75000.00/min [590000], rate=75479.74/min [600000], rate=75949.37/min [610000], rate=76091.48/min [620000], rate=76701.03/min [630000], rate=76985.74/min [640000], rate=77263.58/min [650000], rate=77844.31/min [660000], rate=77952.76/min [670000], rate=78515.62/min [680000], rate=79069.77/min [690000], rate=79462.57/min [700000], rate=79847.91/min [710000], rate=80225.99/min [720000], rate=80747.66/min [730000], rate=81261.60/min [740000], rate=82222.22/min [750000], rate=82417.58/min [760000], rate=82310.47/min [770000], rate=81914.89/min [780000], rate=81533.10/min [790000], rate=81443.30/min [800000], rate=81355.93/min [810000], rate=81135.23/min [820000], rate=80921.05/min [830000], rate=80844.16/min [840000], rate=80511.18/min [850000], rate=80314.96/min [860000], rate=80248.83/min [870000], rate=79938.74/min [880000], rate=80000.00/min [890000], rate=79940.12/min [900000], rate=79881.66/min [910000], rate=79708.03/min [920000], rate=79538.90/min [930000], rate=79487.18/min [940000], rate=79436.62/min [950000], rate=79276.77/min [960000], rate=79229.71/min [970000], rate=79076.09/min [980000], rate=79032.26/min [990000], rate=78989.36/min [1000000], rate=78843.63/min [1010000], rate=78701.30/min [1020000], rate=78663.24/min [1030000], rate=78526.05/min [1040000], rate=78490.57/min [1050000], rate=78553.62/min [1060000], rate=78518.52/min [1070000], rate=78676.47/min [1080000], rate=78736.33/min [1090000], rate=78795.18/min [1100000], rate=78947.37/min [1110000], rate=79003.56/min [1120000], rate=79151.94/min [1130000], rate=79391.10/min [1140000], rate=79534.88/min [1150000], rate=79768.79/min [1160000], rate=79816.51/min [1170000], rate=80136.99/min [1180000], rate=80729.76/min [1190000], rate=81321.18/min [1200000], rate=81725.31/min [1210000], rate=82219.71/min [1220000], rate=82432.43/min [1230000], rate=82642.78/min [1240000], rate=82850.78/min [1250000], rate=83148.56/min [1260000], rate=83443.71/min [1270000], rate=83644.35/min [1280000], rate=83934.43/min [1290000], rate=84039.09/min [1300000], rate=84142.39/min [1310000], rate=83795.31/min [1320000], rate=83544.30/min [1330000], rate=83211.68/min [1340000], rate=82972.14/min [1350000], rate=82653.06/min [1360000], rate=82341.07/min [1370000], rate=81954.14/min [1380000], rate=81899.11/min [1390000], rate=81764.71/min [1400000], rate=81553.40/min [1410000], rate=81424.45/min [1420000], rate=81375.36/min [1430000], rate=81250.00/min [1440000], rate=81126.76/min [1450000], rate=81081.08/min [1460000], rate=81186.28/min [1470000], rate=81140.75/min [1480000], rate=81170.02/min [1490000], rate=81125.23/min [1500000], rate=80789.95/min [1510000], rate=80748.66/min [1520000], rate=80565.37/min [1530000], rate=80455.74/min [1540000], rate=80417.75/min [1550000], rate=80380.29/min [1560000], rate=80412.37/min [1570000], rate=80444.06/min [1580000], rate=80407.12/min [1590000], rate=80303.03/min [1600000], rate=80469.40/min [1610000], rate=80634.39/min [1620000], rate=80663.90/min [1630000], rate=80693.07/min [1640000], rate=80788.18/min [1650000], rate=80882.35/min [1660000], rate=80975.61/min [1670000], rate=81067.96/min [1680000], rate=81159.42/min [1690000], rate=81250.00/min [1700000], rate=81404.63/min [1710000], rate=81622.91/min [1720000], rate=81710.21/min [1730000], rate=81925.81/min [1740000], rate=82204.72/min [1750000], rate=82417.58/min [1760000], rate=82564.50/min [1770000], rate=82710.28/min [1780000], rate=82919.25/min [1790000], rate=83062.65/min [1800000], rate=83013.07/min [1810000], rate=82900.76/min [1820000], rate=82852.81/min [1830000], rate=82680.72/min [1840000], rate=82511.21/min [1850000], rate=82405.35/min [1860000], rate=82422.45/min [1870000], rate=82318.42/min [1880000], rate=82275.71/min [1890000], rate=82233.50/min [1900000], rate=82191.78/min [1910000], rate=82209.47/min [1920000], rate=82285.71/min [1930000], rate=82361.31/min [1940000], rate=82377.92/min [1950000], rate=82452.43/min [1960000], rate=82526.32/min [1970000], rate=82715.19/min [1980000], rate=82787.46/min [1990000], rate=82916.67/min [2000000], rate=83044.98/min [2010000], rate=83229.81/min [2020000], rate=83298.97/min [2030000], rate=83367.56/min [2040000], rate=83606.56/min [2050000], rate=83901.77/min [2060000], rate=84024.47/min [2070000], rate=84203.39/min [2080000], rate=84324.32/min [2090000], rate=84444.44/min [2100000], rate=84677.42/min [2110000], rate=84682.27/min [2120000], rate=84687.08/min [2130000], rate=84579.75/min [2140000], rate=84529.30/min [2150000], rate=84534.73/min [2160000], rate=84485.01/min [2170000], rate=84435.80/min [2180000], rate=84441.58/min [2190000], rate=84501.61/min [2200000], rate=84507.04/min [2210000], rate=84512.43/min [2220000], rate=84517.77/min [2230000], rate=84523.06/min [2240000], rate=84634.76/min [2250000], rate=84692.60/min [2260000], rate=84803.00/min [2270000], rate=84912.72/min [2280000], rate=84968.94/min [2290000], rate=84972.17/min [2300000], rate=85080.15/min [2310000], rate=85135.14/min [2320000], rate=85033.60/min [2330000], rate=85140.07/min [2340000], rate=85453.44/min [2350000], rate=85766.42/min [2360000], rate=86079.03/min [2370000], rate=86443.77/min [2380000], rate=86755.77/min [2390000], rate=86856.45/min [2400000], rate=86956.52/min [2410000], rate=87108.43/min [2420000], rate=87259.62/min [2430000], rate=87305.39/min [2440000], rate=87402.99/min [2450000], rate=87500.00/min [2460000], rate=87596.44/min [2470000], rate=87796.21/min [2480000], rate=87839.43/min [2490000], rate=87779.08/min [2500000], rate=87668.03/min [2510000], rate=87609.08/min [2520000], rate=87652.17/min [2530000], rate=87644.34/min [2540000], rate=87788.02/min [2550000], rate=87931.03/min [2560000], rate=87922.15/min [2570000], rate=87863.25/min [2580000], rate=87854.71/min [2590000], rate=87846.24/min [2600000], rate=87887.32/min [2610000], rate=88076.49/min [2620000], rate=88116.59/min [2630000], rate=88156.42/min [2640000], rate=88245.13/min [2650000], rate=88284.29/min [2660000], rate=88372.09/min [2670000], rate=88508.29/min [2680000], rate=88595.04/min [2690000], rate=88730.07/min [2700000], rate=88864.51/min [2710000], rate=89095.89/min [2720000], rate=89375.68/min [2730000], rate=89655.17/min [2740000], rate=89836.07/min [2750000], rate=90065.50/min [2760000], rate=90196.08/min [2770000], rate=90326.09/min [2780000], rate=90455.53/min [2790000], rate=90535.42/min [2800000], rate=90663.79/min [2810000], rate=90693.92/min 630.32/min [2670000], rate=90713.48/min [2680000], rate=90744.92/min [2690000], rate=90878.38/min [2700000], rate=90909.09/min [2710000], rate=91041.43/min [2720000], rate=91122.28/min [2730000], rate=91202.67/min [2740000], rate=91333.33/min [2750000], rate=91514.14/min [2760000], rate=91542.29/min [2770000], rate=91318.68/min [2780000], rate=91048.03/min [2790000], rate=90731.71/min [2800000], rate=90468.50/min [2810000], rate=90160.43/min -building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=46153.85/min [20000], rate=44444.44/min [30000], rate=48648.65/min [40000], rate=48000.00/min [50000], rate=49180.33/min [60000], rate=51428.57/min [70000], rate=51851.85/min [80000], rate=51612.90/min [90000], rate=51923.08/min [100000], rate=51724.14/min [110000], rate=50769.23/min [120000], rate=50704.23/min [130000], rate=50980.39/min [140000], rate=51851.85/min [150000], rate=52325.58/min [160000], rate=53631.28/min [170000], rate=54545.45/min [180000], rate=55670.10/min [190000], rate=56716.42/min [200000], rate=57692.31/min [210000], rate=58878.50/min [220000], rate=60273.97/min [230000], rate=61607.14/min [240000], rate=62882.10/min [250000], rate=63829.79/min [260000], rate=65000.00/min [270000], rate=65853.66/min [280000], rate=67200.00/min [290000], rate=68235.29/min [300000], rate=69498.07/min [310000], rate=70722.43/min [320000], rate=71910.11/min [330000], rate=72794.12/min [340000], rate=73646.21/min [350000], rate=74468.09/min [360000], rate=74740.48/min [370000], rate=75000.00/min [380000], rate=75747.51/min [390000], rate=75974.03/min [400000], rate=76677.32/min [410000], rate=77602.52/min [420000], rate=78504.67/min [430000], rate=79384.62/min [440000], rate=80243.16/min [450000], rate=81325.30/min [460000], rate=81899.11/min [470000], rate=82456.14/min [480000], rate=83478.26/min [490000], rate=83522.73/min [500000], rate=83333.33/min [510000], rate=83152.17/min [520000], rate=82321.90/min [530000], rate=81538.46/min [540000], rate=81407.04/min [550000], rate=81280.79/min [560000], rate=80963.86/min [570000], rate=81042.65/min [580000], rate=80930.23/min [590000], rate=80637.81/min [600000], rate=80898.88/min [610000], rate=80973.45/min [620000], rate=81400.44/min [630000], rate=81641.47/min [640000], rate=81876.33/min [650000], rate=82105.26/min [660000], rate=82672.23/min [670000], rate=83229.81/min [680000], rate=83606.56/min [690000], rate=84146.34/min [700000], rate=84677.42/min [710000], rate=85029.94/min [720000], rate=85544.55/min [730000], rate=85882.35/min [740000], rate=86381.32/min [750000], rate=86042.07/min [760000], rate=85553.47/min [770000], rate=85397.41/min [780000], rate=85090.91/min [790000], rate=84794.28/min [800000], rate=84805.65/min [810000], rate=84668.99/min [820000], rate=84681.58/min [830000], rate=84693.88/min [840000], rate=84991.57/min [850000], rate=85000.00/min [860000], rate=85008.24/min [870000], rate=85154.98/min [880000], rate=85298.87/min [890000], rate=85714.29/min [900000], rate=85850.56/min [910000], rate=86119.87/min [920000], rate=86250.00/min [930000], rate=86645.96/min [940000], rate=87306.50/min [950000], rate=87827.43/min [960000], rate=88343.56/min [970000], rate=88854.96/min [980000], rate=89361.70/min [990000], rate=89863.84/min [1000000], rate=90090.09/min [1010000], rate=90447.76/min [1020000], rate=90936.11/min [1030000], rate=90483.16/min [1040000], rate=89913.54/min [1050000], rate=89488.64/min [1060000], rate=89075.63/min [1070000], rate=88551.72/min [1080000], rate=88163.27/min [1090000], rate=88021.53/min [1100000], rate=88235.29/min [1110000], rate=88446.22/min [1120000], rate=88771.47/min [1130000], rate=88396.35/min [1140000], rate=88144.33/min [1150000], rate=87898.09/min [1160000], rate=87657.43/min [1170000], rate=87531.17/min [1180000], rate=87299.63/min [1190000], rate=87286.06/min [1200000], rate=87167.07/min [1210000], rate=87050.36/min [1220000], rate=86935.87/min [1230000], rate=86925.80/min [1240000], rate=86915.89/min [1250000], rate=86805.56/min [1260000], rate=86597.94/min [1270000], rate=86394.56/min [1280000], rate=86292.13/min [1290000], rate=86191.54/min [1300000], rate=86092.72/min [1310000], rate=85807.86/min [1320000], rate=85529.16/min [1330000], rate=85256.41/min [1340000], rate=84989.43/min [1350000], rate=84905.66/min [1360000], rate=84911.55/min [1370000], rate=84917.36/min [1380000], rate=85010.27/min [1390000], rate=84928.72/min [1400000], rate=84762.87/min [1410000], rate=84684.68/min [1420000], rate=84691.85/min [1430000], rate=84698.91/min [1440000], rate=84622.92/min [1450000], rate=84712.76/min [1460000], rate=84719.54/min [1470000], rate=84644.91/min [1480000], rate=84652.05/min [1490000], rate=84579.00/min [1500000], rate=84586.47/min [1510000], rate=84514.93/min [1520000], rate=84366.33/min [1530000], rate=84375.00/min [1540000], rate=84229.72/min [1550000], rate=84162.90/min [1560000], rate=84097.04/min [1570000], rate=84107.14/min [1580000], rate=84191.83/min [1590000], rate=84126.98/min [1600000], rate=84136.72/min [1610000], rate=84146.34/min [1620000], rate=84228.77/min [1630000], rate=84310.34/min [1640000], rate=84463.52/min [1650000], rate=84615.38/min [1660000], rate=84765.96/min [1670000], rate=84915.25/min [1680000], rate=85135.14/min [1690000], rate=85353.54/min [1700000], rate=85498.74/min [1710000], rate=85714.29/min [1720000], rate=85856.91/min [1730000], rate=85998.34/min [1740000], rate=85855.26/min [1750000], rate=85365.85/min [1760000], rate=85092.67/min [1770000], rate=84756.58/min [1780000], rate=84426.88/min [1790000], rate=84103.37/min [1800000], rate=83850.93/min [1810000], rate=83667.18/min [1820000], rate=83422.46/min [1830000], rate=83181.82/min [1840000], rate=82945.15/min [1850000], rate=82774.05/min [1860000], rate=82605.48/min [1870000], rate=82500.00/min [1880000], rate=82335.77/min [1890000], rate=82233.50/min [1900000], rate=82251.08/min [1910000], rate=82209.47/min [1920000], rate=82051.28/min [1930000], rate=81953.29/min [1940000], rate=81799.02/min [1950000], rate=81761.01/min [1960000], rate=81837.16/min [1970000], rate=81799.31/min [1980000], rate=81761.87/min [1990000], rate=81668.95/min [2000000], rate=81688.22/min [2010000], rate=81707.32/min [2020000], rate=81671.16/min [2030000], rate=81690.14/min [2040000], rate=81600.00/min [2050000], rate=81619.11/min [2060000], rate=81692.00/min [2070000], rate=81764.32/min [2080000], rate=81836.07/min [2090000], rate=81907.25/min [2100000], rate=82031.25/min [2110000], rate=82101.17/min [2120000], rate=82223.66/min [2130000], rate=82345.36/min [2140000], rate=82466.28/min [2150000], rate=82533.59/min [2160000], rate=82705.81/min [2170000], rate=82771.77/min [2180000], rate=82942.30/min [2190000], rate=83059.42/min [2200000], rate=83175.80/min [2210000], rate=83343.81/min [2220000], rate=83458.65/min [2230000], rate=83625.00/min [2240000], rate=83686.18/min [2250000], rate=83746.90/min [2260000], rate=83807.17/min [2270000], rate=84074.07/min [2280000], rate=84288.35/min [2290000], rate=84605.91/min [2300000], rate=84923.08/min [2310000], rate=85082.87/min [2320000], rate=85137.61/min [2330000], rate=85243.90/min [2340000], rate=85349.54/min [2350000], rate=85454.55/min [2360000], rate=85558.91/min [2370000], rate=85611.08/min [2380000], rate=85765.77/min [2390000], rate=85714.29/min [2400000], rate=85459.94/min [2410000], rate=85159.01/min [2420000], rate=84961.97/min [2430000], rate=84767.44/min [2440000], rate=84624.28/min [2450000], rate=84434.23/min [2460000], rate=84198.52/min [2470000], rate=84061.26/min [2480000], rate=83878.24/min [2490000], rate=83697.48/min [2500000], rate=83518.93/min [2510000], rate=83296.46/min [2520000], rate=83122.59/min [2530000], rate=82905.52/min [2540000], rate=82781.10/min [2550000], rate=82837.03/min [2560000], rate=82937.37/min [2570000], rate=82548.18/min [2580000], rate=82340.43/min [2590000], rate=82222.22/min [2600000], rate=82105.26/min [2610000], rate=82032.48/min [2620000], rate=81960.38/min [2630000], rate=81804.04/min [2640000], rate=81691.59/min [2650000], rate=81580.30/min [2660000], rate=81470.14/min [2670000], rate=81361.10/min [2680000], rate=81253.16/min [2690000], rate=81187.12/min [2700000], rate=81162.32/min [2710000], rate=81137.72/min [2720000], rate=81032.77/min [2730000], rate=80968.86/min [2740000], rate=80985.22/min [2750000], rate=80961.73/min [2760000], rate=80978.00/min [2770000], rate=80994.15/min [2780000], rate=80970.87/min [2790000], rate=80986.94/min [2800000], rate=81002.89/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir --filt_file /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 12000000.00 reads per min processed... 10000000.00 reads per min processed... 12000000.00 reads per min processed... 10500000.00 reads per min processed... 12000000.00 reads per min processed... 10800000.00 reads per min processed... 10000000.00 reads per min processed... 11000000.00 reads per min processed... 10285714.29 reads per min processed... 8666666.67 reads per min processed... 8400000.00 reads per min processed... 7500000.00 reads per min processed... 7384615.38 reads per min processed... 7285714.29 reads per min processed... 7200000.00 reads per min processed... 6705882.35 reads per min processed... 6666666.67 reads per min processed... 6631578.95 reads per min processed... 6600000.00 reads per min processed... 6571428.57 reads per min processed... 6260869.57 reads per min processed... 6250000.00 reads per min processed... 6240000.00 reads per min processed... 6230769.23 reads per min processed... 6222222.22 reads per min processed... 6214285.71 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5823529.41 reads per min processed... 5828571.43 reads per min processed... 5675675.68 reads per min processed... 5538461.54 reads per min processed... 5414634.15 reads per min processed... 5428571.43 reads per min processed... 5318181.82 reads per min processed... 5333333.33 reads per min processed... 5234042.55 reads per min processed... 5250000.00 reads per min processed... 5265306.12 reads per min processed... 5280000.00 reads per min processed... 5294117.65 reads per min processed... 5307692.31 reads per min processed... 5222222.22 reads per min processed... 5236363.64 reads per min processed... 5250000.00 reads per min processed... 5172413.79 reads per min processed... 5186440.68 reads per min processed... 5200000.00 reads per min processed... 5213114.75 reads per min processed... 5225806.45 reads per min processed... 5238095.24 reads per min processed... 5169230.77 reads per min processed... 5181818.18 reads per min processed... 5272727.27 reads per min processed... 5283582.09 reads per min processed... 5294117.65 reads per min processed... 5382352.94 reads per min processed... 5391304.35 reads per min processed... 5478260.87 reads per min processed... 5485714.29 reads per min processed... 5571428.57 reads per min processed... 5577464.79 reads per min processed... 5661971.83 reads per min processed... 5666666.67 reads per min processed... 5594594.59 reads per min processed... 5600000.00 reads per min processed... 5605263.16 reads per min processed... 5610389.61 reads per min processed... 5544303.80 reads per min processed... 5550000.00 reads per min processed... 5555555.56 reads per min processed... 5560975.61 reads per min processed... 5566265.06 reads per min processed... 5571428.57 reads per min processed... 5576470.59 reads per min processed... 5517241.38 reads per min processed... 5460674.16 reads per min processed... 5466666.67 reads per min processed... 5533333.33 reads per min processed... 5538461.54 reads per min processed... 5483870.97 reads per min processed... 5489361.70 reads per min processed... 5494736.84 reads per min processed... 5500000.00 reads per min processed... 5505154.64 reads per min processed... 5510204.08 reads per min processed... 5515151.52 reads per min processed... 5520000.00 reads per min processed... 5524752.48 reads per min processed... 5529411.76 reads per min processed... 5533980.58 reads per min processed... 5538461.54 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -184084.632490 EM: Round [1] log likelihood: -183628.540676 EM: Round [2] log likelihood: -183459.525923 EM: Round [3] log likelihood: -183379.523578 EM: Round [4] log likelihood: -183336.890858 EM: Round [5] log likelihood: -183312.713434 EM: Round [6] log likelihood: -183298.370962 EM: Round [7] log likelihood: -183289.495095 EM: Round [8] log likelihood: -183283.768956 EM: Round [9] log likelihood: -183279.926681 EM: Round [10] log likelihood: -183277.255071 EM: Round [11] log likelihood: -183275.338427 EM: Round [12] log likelihood: -183273.925745 EM: Round [13] log likelihood: -183272.860096 EM: Round [14] log likelihood: -183272.040074 EM: Round [15] log likelihood: -183271.398124 EM: Round [16] log likelihood: -183270.887981 EM: Round [17] log likelihood: -183270.477175 EM: Round [18] log likelihood: -183270.142423 EM: Round [19] log likelihood: -183269.866709 EM: Round [20] log likelihood: -183269.637396 EM: Round [21] log likelihood: -183269.444959 EM: Round [22] log likelihood: -183269.282127 EM: Round [23] log likelihood: -183269.143287 EM: Round [24] log likelihood: -183269.024058 EM: Round [25] log likelihood: -183268.920990 EM: Round [26] log likelihood: -183268.831340 EM: Round [27] log likelihood: -183268.752913 EM: Round [28] log likelihood: -183268.683934 EM: Round [29] log likelihood: -183268.622960 EM: Round [30] log likelihood: -183268.568810 EM: Round [31] log likelihood: -183268.520511 EM: Round [32] log likelihood: -183268.477255 EM: Round [33] log likelihood: -183268.438368 EM: Round [34] log likelihood: -183268.403285 EM: Round [35] log likelihood: -183268.371530 EM: Round [36] log likelihood: -183268.342697 EM: Round [37] log likelihood: -183268.316442 EM: Round [38] log likelihood: -183268.292470 EM: Round [39] log likelihood: -183268.270527 EM: Round [40] log likelihood: -183268.250395 EM: Round [41] log likelihood: -183268.231882 EM: Round [42] log likelihood: -183268.214822 EM: Round [43] log likelihood: -183268.199072 EM: Round [44] log likelihood: -183268.184502 EM: Round [45] log likelihood: -183268.171002 EM: Round [46] log likelihood: -183268.158473 EM: Round [47] log likelihood: -183268.146825 EM: Round [48] log likelihood: -183268.135982 EM: Round [49] log likelihood: -183268.125872 EM: Round [50] log likelihood: -183268.116435 EM: Round [51] log likelihood: -183268.107613 EM: Round [52] log likelihood: -183268.099357 EM: Round [53] log likelihood: -183268.091621 EM: Round [54] log likelihood: -183268.084364 EM: Round [55] log likelihood: -183268.077549 EM: Round [56] log likelihood: -183268.071143 EM: Round [57] log likelihood: -183268.065114 EM: Round [58] log likelihood: -183268.059435 EM: Round [59] log likelihood: -183268.054081 EM: Round [60] log likelihood: -183268.049027 EM: Round [61] log likelihood: -183268.044254 EM: Round [62] log likelihood: -183268.039742 EM: Round [63] log likelihood: -183268.035472 EM: Round [64] log likelihood: -183268.031429 EM: Round [65] log likelihood: -183268.027597 EM: Round [66] log likelihood: -183268.023962 EM: Round [67] log likelihood: -183268.020512 EM: Round [68] log likelihood: -183268.017234 EM: Round [69] log likelihood: -183268.014119 EM: Round [70] log likelihood: -183268.011155 EM: Round [71] log likelihood: -183268.008333 EM: Round [72] log likelihood: -183268.005644 EM: Round [73] log likelihood: -183268.003081 EM: Round [74] log likelihood: -183268.000637 EM: Round [75] log likelihood: -183267.998303 EM: Round [76] log likelihood: -183267.996074 EM: Round [77] log likelihood: -183267.993943 EM: Round [78] log likelihood: -183267.991906 EM: Round [79] log likelihood: -183267.989956 EM: Round [80] log likelihood: -183267.988089 EM: Round [81] log likelihood: -183267.986300 EM: Round [82] log likelihood: -183267.984585 EM: Round [83] log likelihood: -183267.982940 EM: Round [84] log likelihood: -183267.981362 EM: Round [85] log likelihood: -183267.979846 EM: Round [86] log likelihood: -183267.978390 EM: Round [87] log likelihood: -183267.976990 EM: Round [88] log likelihood: -183267.975644 EM: Round [89] log likelihood: -183267.974349 EM: Round [90] log likelihood: -183267.973102 EM: Round [91] log likelihood: -183267.971902 EM: Round [92] log likelihood: -183267.970744 EM: Round [93] log likelihood: -183267.969629 EM: Round [94] log likelihood: -183267.968553 EM: Round [95] log likelihood: -183267.967515 EM: Round [96] log likelihood: -183267.966513 EM: Round [97] log likelihood: -183267.965545 EM: Round [98] log likelihood: -183267.964610 EM: Round [99] log likelihood: -183267.963707 EM: Round [100] log likelihood: -183267.962833 EM: Round [101] log likelihood: -183267.961988 EM: Round [102] log likelihood: -183267.961170 EM: Round [103] log likelihood: -183267.960378 EM: Round [104] log likelihood: -183267.959611 EM: Round [105] log likelihood: -183267.958868 EM: Round [106] log likelihood: -183267.958149 EM: Round [107] log likelihood: -183267.957451 EM: Round [108] log likelihood: -183267.956774 EM: Round [109] log likelihood: -183267.956118 EM: Round [110] log likelihood: -183267.955481 EM: Round [111] log likelihood: -183267.954862 EM: Round [112] log likelihood: -183267.954262 EM: Round [113] log likelihood: -183267.953678 EM: Round [114] log likelihood: -183267.953112 EM: Round [115] log likelihood: -183267.952561 EM: Round [116] log likelihood: -183267.952026 EM: Round [117] log likelihood: -183267.951505 EM: Round [118] log likelihood: -183267.950999 EM: Round [119] log likelihood: -183267.950506 EM: Round [120] log likelihood: -183267.950026 EM: Round [121] log likelihood: -183267.949560 EM: Round [122] log likelihood: -183267.949105 EM: Round [123] log likelihood: -183267.948663 EM: Round [124] log likelihood: -183267.948231 EM: Round [125] log likelihood: -183267.947811 EM: Round [126] log likelihood: -183267.947402 EM: Round [127] log likelihood: -183267.947003 EM: Round [128] log likelihood: -183267.946614 EM: Round [129] log likelihood: -183267.946234 EM: Round [130] log likelihood: -183267.945864 EM: Round [131] log likelihood: -183267.945503 EM: Round [132] log likelihood: -183267.945150 EM: Round [133] log likelihood: -183267.944806 EM: Round [134] log likelihood: -183267.944471 EM: Round [135] log likelihood: -183267.944143 EM: Round [136] log likelihood: -183267.943823 EM: Round [137] log likelihood: -183267.943510 EM: Round [138] log likelihood: -183267.943205 EM: Round [139] log likelihood: -183267.942907 EM: Round [140] log likelihood: -183267.942615 EM: Round [141] log likelihood: -183267.942330 EM: Round [142] log likelihood: -183267.942052 EM: Round [143] log likelihood: -183267.941779 EM: Round [144] log likelihood: -183267.941513 EM: Round [145] log likelihood: -183267.941253 EM: Round [146] log likelihood: -183267.940998 EM: Round [147] log likelihood: -183267.940749 EM: Round [148] log likelihood: -183267.940506 EM: Round [149] log likelihood: -183267.940267 EM: Round [150] log likelihood: -183267.940034 EM: Round [151] log likelihood: -183267.939806 EM: Round [152] log likelihood: -183267.939582 EM: Round [153] log likelihood: -183267.939364 EM: Round [154] log likelihood: -183267.939150 EM: Round [155] log likelihood: -183267.938940 EM: Round [156] log likelihood: -183267.938735 EM: Round [157] log likelihood: -183267.938534 EM: Round [158] log likelihood: -183267.938337 EM: Round [159] log likelihood: -183267.938144 EM: Round [160] log likelihood: -183267.937955 EM: Round [161] log likelihood: -183267.937770 EM: Round [162] log likelihood: -183267.937589 EM: Round [163] log likelihood: -183267.937411 EM: Round [164] log likelihood: -183267.937237 EM: Round [165] log likelihood: -183267.937066 EM: Round [166] log likelihood: -183267.936899 EM: Round [167] log likelihood: -183267.936735 EM: Round [168] log likelihood: -183267.936574 EM: Round [169] log likelihood: -183267.936417 EM: Round [170] log likelihood: -183267.936262 EM: Round [171] log likelihood: -183267.936111 EM: Round [172] log likelihood: -183267.935962 EM: Round [173] log likelihood: -183267.935816 EM: Round [174] log likelihood: -183267.935673 EM: Round [175] log likelihood: -183267.935533 EM: Round [176] log likelihood: -183267.935396 EM: Round [177] log likelihood: -183267.935261 EM: Round [178] log likelihood: -183267.935128 EM: Round [179] log likelihood: -183267.934999 EM: Round [180] log likelihood: -183267.934871 EM: Round [181] log likelihood: -183267.934746 EM: Round [182] log likelihood: -183267.934624 EM: Round [183] log likelihood: -183267.934503 EM: Round [184] log likelihood: -183267.934385 EM: Round [185] log likelihood: -183267.934269 EM: Round [186] log likelihood: -183267.934155 EM: Round [187] log likelihood: -183267.934044 EM: Round [188] log likelihood: -183267.933934 EM: Round [189] log likelihood: -183267.933826 EM: Round [190] log likelihood: -183267.933721 EM: Round [191] log likelihood: -183267.933617 EM: Round [192] log likelihood: -183267.933515 EM: Round [193] log likelihood: -183267.933415 EM: Round [194] log likelihood: -183267.933317 EM: Stopping iterations at round 194 due to insufficient improvement in likelihood. EM: Starting log likelihood: -183872.616845 EM: Round [1] log likelihood: -183480.149811 EM: Round [2] log likelihood: -183341.439403 EM: Round [3] log likelihood: -183277.319688 EM: Round [4] log likelihood: -183243.760206 EM: Round [5] log likelihood: -183225.026471 EM: Round [6] log likelihood: -183214.069602 EM: Round [7] log likelihood: -183207.376286 EM: Round [8] log likelihood: -183203.109796 EM: Round [9] log likelihood: -183200.278665 EM: Round [10] log likelihood: -183198.330229 EM: Round [11] log likelihood: -183196.945572 EM: Round [12] log likelihood: -183195.933959 EM: Round [13] log likelihood: -183195.177204 EM: Round [14] log likelihood: -183194.599550 EM: Round [15] log likelihood: -183194.150881 EM: Round [16] log likelihood: -183193.797082 EM: Round [17] log likelihood: -183193.514337 EM: Round [18] log likelihood: -183193.285642 EM: Round [19] log likelihood: -183193.098628 EM: Round [20] log likelihood: -183192.944147 EM: Round [21] log likelihood: -183192.815336 EM: Round [22] log likelihood: -183192.706981 EM: Round [23] log likelihood: -183192.615079 EM: Round [24] log likelihood: -183192.536523 EM: Round [25] log likelihood: -183192.468882 EM: Round [26] log likelihood: -183192.410238 EM: Round [27] log likelihood: -183192.359064 EM: Round [28] log likelihood: -183192.314137 EM: Round [29] log likelihood: -183192.274469 EM: Round [30] log likelihood: -183192.239258 EM: Round [31] log likelihood: -183192.207848 EM: Round [32] log likelihood: -183192.179698 EM: Round [33] log likelihood: -183192.154360 EM: Round [34] log likelihood: -183192.131463 EM: Round [35] log likelihood: -183192.110694 EM: Round [36] log likelihood: -183192.091789 EM: Round [37] log likelihood: -183192.074527 EM: Round [38] log likelihood: -183192.058717 EM: Round [39] log likelihood: -183192.044197 EM: Round [40] log likelihood: -183192.030827 EM: Round [41] log likelihood: -183192.018486 EM: Round [42] log likelihood: -183192.007071 EM: Round [43] log likelihood: -183191.996488 EM: Round [44] log likelihood: -183191.986659 EM: Round [45] log likelihood: -183191.977513 EM: Round [46] log likelihood: -183191.968987 EM: Round [47] log likelihood: -183191.961028 EM: Round [48] log likelihood: -183191.953585 EM: Round [49] log likelihood: -183191.946615 EM: Round [50] log likelihood: -183191.940080 EM: Round [51] log likelihood: -183191.933944 EM: Round [52] log likelihood: -183191.928175 EM: Round [53] log likelihood: -183191.922746 EM: Round [54] log likelihood: -183191.917630 EM: Round [55] log likelihood: -183191.912804 EM: Round [56] log likelihood: -183191.908246 EM: Round [57] log likelihood: -183191.903939 EM: Round [58] log likelihood: -183191.899863 EM: Round [59] log likelihood: -183191.896003 EM: Round [60] log likelihood: -183191.892344 EM: Round [61] log likelihood: -183191.888872 EM: Round [62] log likelihood: -183191.885575 EM: Round [63] log likelihood: -183191.882442 EM: Round [64] log likelihood: -183191.879462 EM: Round [65] log likelihood: -183191.876626 EM: Round [66] log likelihood: -183191.873923 EM: Round [67] log likelihood: -183191.871347 EM: Round [68] log likelihood: -183191.868889 EM: Round [69] log likelihood: -183191.866542 EM: Round [70] log likelihood: -183191.864300 EM: Round [71] log likelihood: -183191.862156 EM: Round [72] log likelihood: -183191.860105 EM: Round [73] log likelihood: -183191.858142 EM: Round [74] log likelihood: -183191.856261 EM: Round [75] log likelihood: -183191.854458 EM: Round [76] log likelihood: -183191.852728 EM: Round [77] log likelihood: -183191.851068 EM: Round [78] log likelihood: -183191.849475 EM: Round [79] log likelihood: -183191.847943 EM: Round [80] log likelihood: -183191.846471 EM: Round [81] log likelihood: -183191.845054 EM: Round [82] log likelihood: -183191.843691 EM: Round [83] log likelihood: -183191.842379 EM: Round [84] log likelihood: -183191.841114 EM: Round [85] log likelihood: -183191.839895 EM: Round [86] log likelihood: -183191.838720 EM: Round [87] log likelihood: -183191.837585 EM: Round [88] log likelihood: -183191.836490 EM: Round [89] log likelihood: -183191.835433 EM: Round [90] log likelihood: -183191.834411 EM: Round [91] log likelihood: -183191.833424 EM: Round [92] log likelihood: -183191.832469 EM: Round [93] log likelihood: -183191.831545 EM: Round [94] log likelihood: -183191.830651 EM: Round [95] log likelihood: -183191.829785 EM: Round [96] log likelihood: -183191.828947 EM: Round [97] log likelihood: -183191.828134 EM: Round [98] log likelihood: -183191.827347 EM: Round [99] log likelihood: -183191.826583 EM: Round [100] log likelihood: -183191.825842 EM: Round [101] log likelihood: -183191.825124 EM: Round [102] log likelihood: -183191.824426 EM: Round [103] log likelihood: -183191.823749 EM: Round [104] log likelihood: -183191.823091 EM: Round [105] log likelihood: -183191.822452 EM: Round [106] log likelihood: -183191.821831 EM: Round [107] log likelihood: -183191.821228 EM: Round [108] log likelihood: -183191.820641 EM: Round [109] log likelihood: -183191.820070 EM: Round [110] log likelihood: -183191.819514 EM: Round [111] log likelihood: -183191.818974 EM: Round [112] log likelihood: -183191.818448 EM: Round [113] log likelihood: -183191.817935 EM: Round [114] log likelihood: -183191.817436 EM: Round [115] log likelihood: -183191.816951 EM: Round [116] log likelihood: -183191.816477 EM: Round [117] log likelihood: -183191.816016 EM: Round [118] log likelihood: -183191.815566 EM: Round [119] log likelihood: -183191.815127 EM: Round [120] log likelihood: -183191.814700 EM: Round [121] log likelihood: -183191.814283 EM: Round [122] log likelihood: -183191.813876 EM: Round [123] log likelihood: -183191.813479 EM: Round [124] log likelihood: -183191.813091 EM: Round [125] log likelihood: -183191.812713 EM: Round [126] log likelihood: -183191.812344 EM: Round [127] log likelihood: -183191.811984 EM: Round [128] log likelihood: -183191.811632 EM: Round [129] log likelihood: -183191.811288 EM: Round [130] log likelihood: -183191.810952 EM: Round [131] log likelihood: -183191.810624 EM: Round [132] log likelihood: -183191.810303 EM: Round [133] log likelihood: -183191.809990 EM: Round [134] log likelihood: -183191.809684 EM: Round [135] log likelihood: -183191.809384 EM: Round [136] log likelihood: -183191.809091 EM: Round [137] log likelihood: -183191.808805 EM: Round [138] log likelihood: -183191.808525 EM: Round [139] log likelihood: -183191.808251 EM: Round [140] log likelihood: -183191.807984 EM: Round [141] log likelihood: -183191.807722 EM: Round [142] log likelihood: -183191.807465 EM: Round [143] log likelihood: -183191.807214 EM: Round [144] log likelihood: -183191.806969 EM: Round [145] log likelihood: -183191.806729 EM: Round [146] log likelihood: -183191.806493 EM: Round [147] log likelihood: -183191.806263 EM: Round [148] log likelihood: -183191.806038 EM: Round [149] log likelihood: -183191.805817 EM: Round [150] log likelihood: -183191.805601 EM: Round [151] log likelihood: -183191.805389 EM: Round [152] log likelihood: -183191.805182 EM: Round [153] log likelihood: -183191.804979 EM: Round [154] log likelihood: -183191.804780 EM: Round [155] log likelihood: -183191.804585 EM: Round [156] log likelihood: -183191.804394 EM: Round [157] log likelihood: -183191.804207 EM: Round [158] log likelihood: -183191.804024 EM: Round [159] log likelihood: -183191.803844 EM: Round [160] log likelihood: -183191.803668 EM: Round [161] log likelihood: -183191.803495 EM: Round [162] log likelihood: -183191.803326 EM: Round [163] log likelihood: -183191.803161 EM: Round [164] log likelihood: -183191.802998 EM: Round [165] log likelihood: -183191.802839 EM: Round [166] log likelihood: -183191.802682 EM: Round [167] log likelihood: -183191.802529 EM: Round [168] log likelihood: -183191.802379 EM: Round [169] log likelihood: -183191.802232 EM: Round [170] log likelihood: -183191.802087 EM: Round [171] log likelihood: -183191.801946 EM: Round [172] log likelihood: -183191.801807 EM: Round [173] log likelihood: -183191.801670 EM: Round [174] log likelihood: -183191.801537 EM: Round [175] log likelihood: -183191.801405 EM: Round [176] log likelihood: -183191.801277 EM: Round [177] log likelihood: -183191.801151 EM: Round [178] log likelihood: -183191.801027 EM: Round [179] log likelihood: -183191.800905 EM: Round [180] log likelihood: -183191.800786 EM: Round [181] log likelihood: -183191.800669 EM: Round [182] log likelihood: -183191.800554 EM: Round [183] log likelihood: -183191.800441 EM: Round [184] log likelihood: -183191.800331 EM: Round [185] log likelihood: -183191.800222 EM: Round [186] log likelihood: -183191.800116 EM: Round [187] log likelihood: -183191.800011 EM: Round [188] log likelihood: -183191.799908 EM: Round [189] log likelihood: -183191.799807 EM: Round [190] log likelihood: -183191.799708 EM: Stopping iterations at round 190 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 170947118 > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir --annotate /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir -done, see /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 937, filtered: 8138) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000261143.1] WARNING, no entry stored in dbm for [ENSG00000276047.1] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000237761.3] WARNING, no entry stored in dbm for [ENSG00000271013.1] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000253602.2] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000242559.3] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000279182.1] WARNING, no entry stored in dbm for [ENSG00000272195.1] WARNING, no entry stored in dbm for [ENSG00000223891.6] WARNING, no entry stored in dbm for [ENSG00000279182.1] WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000277147.6] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000263220.1] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000233360.4] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000241547.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000229140.11] WARNING, no entry stored in dbm for [ENSG00000245532.9] WARNING, no entry stored in dbm for [ENSG00000263189.1] WARNING, no entry stored in dbm for [ENSG00000286340.1] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000257167.2] WARNING, no entry stored in dbm for [ENSG00000198685.4] WARNING, no entry stored in dbm for [ENSG00000236229.1] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000237149.5] WARNING, no entry stored in dbm for [ENSG00000231298.7] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000231087.2] WARNING, no entry stored in dbm for [ENSG00000262223.8] WARNING, no entry stored in dbm for [ENSG00000215105.4] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000247363.2] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000263878.2] WARNING, no entry stored in dbm for [ENSG00000250316.1] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000215835.2] WARNING, no entry stored in dbm for [ENSG00000253328.2] WARNING, no entry stored in dbm for [ENSG00000253563.2] WARNING, no entry stored in dbm for [ENSG00000215039.7] WARNING, no entry stored in dbm for [ENSG00000239827.8] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000276721.1] WARNING, no entry stored in dbm for [ENSG00000235831.7] WARNING, no entry stored in dbm for [ENSG00000243560.3] WARNING, no entry stored in dbm for [ENSG00000272767.1] WARNING, no entry stored in dbm for [ENSG00000268364.2] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000258412.1] WARNING, no entry stored in dbm for [ENSG00000231894.2] WARNING, no entry stored in dbm for [ENSG00000125804.14] WARNING, no entry stored in dbm for [ENSG00000241946.1] WARNING, no entry stored in dbm for [ENSG00000215457.5] WARNING, no entry stored in dbm for [ENSG00000281087.1] WARNING, no entry stored in dbm for [ENSG00000286510.1] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000251474.6] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274452.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000222414.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000222328.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274585.1] WARNING, no entry stored in dbm for [ENSG00000252866.1] WARNING, no entry stored in dbm for [ENSG00000202187.1] WARNING, no entry stored in dbm for [ENSG00000252866.1] WARNING, no entry stored in dbm for [ENSG00000201041.1] WARNING, no entry stored in dbm for [ENSG00000252866.1] WARNING, no entry stored in dbm for [ENSG00000207186.1] WARNING, no entry stored in dbm for [ENSG00000272469.2] WARNING, no entry stored in dbm for [ENSG00000264275.1] WARNING, no entry stored in dbm for [ENSG00000244335.3] WARNING, no entry stored in dbm for [ENSG00000266828.2] WARNING, no entry stored in dbm for [ENSG00000264275.1] WARNING, no entry stored in dbm for [ENSG00000265093.2] WARNING, no entry stored in dbm for [ENSG00000264275.1] WARNING, no entry stored in dbm for [ENSG00000275776.1] WARNING, no entry stored in dbm for [ENSG00000264275.1] WARNING, no entry stored in dbm for [ENSG00000222706.1] WARNING, no entry stored in dbm for [ENSG00000222448.1] WARNING, no entry stored in dbm for [ENSG00000248148.1] WARNING, no entry stored in dbm for [ENSG00000230454.1] WARNING, no entry stored in dbm for [ENSG00000287641.1] WARNING, no entry stored in dbm for [ENSG00000258525.2] WARNING, no entry stored in dbm for [ENSG00000240704.1] WARNING, no entry stored in dbm for [ENSG00000227214.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000250980.1] WARNING, no entry stored in dbm for [ENSG00000214975.4] WARNING, no entry stored in dbm for [ENSG00000242613.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000067601.8] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000267475.1] WARNING, no entry stored in dbm for [ENSG00000225308.2] WARNING, no entry stored in dbm for [ENSG00000274602.5] WARNING, no entry stored in dbm for [ENSG00000231686.1] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000256075.1] WARNING, no entry stored in dbm for [ENSG00000282164.3] WARNING, no entry stored in dbm for [ENSG00000205918.9] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000234807.7] WARNING, no entry stored in dbm for [ENSG00000259324.2] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000283667.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000287718.1] WARNING, no entry stored in dbm for [ENSG00000245532.9] WARNING, no entry stored in dbm for [ENSG00000239650.4] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000285215.2] WARNING, no entry stored in dbm for [ENSG00000276735.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000262580.5] WARNING, no entry stored in dbm for [ENSG00000244625.7] WARNING, no entry stored in dbm for [ENSG00000235271.6] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000198358.4] WARNING, no entry stored in dbm for [ENSG00000277319.1] WARNING, no entry stored in dbm for [ENSG00000281202.2] WARNING, no entry stored in dbm for [ENSG00000259069.1] WARNING, no entry stored in dbm for [ENSG00000228063.2] WARNING, no entry stored in dbm for [ENSG00000182366.10] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000261064.1] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000248693.1] WARNING, no entry stored in dbm for [ENSG00000253301.6] WARNING, no entry stored in dbm for [ENSG00000237339.5] WARNING, no entry stored in dbm for [ENSG00000239921.6] WARNING, no entry stored in dbm for [ENSG00000233621.2] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000273148.1] WARNING, no entry stored in dbm for [ENSG00000245526.11] WARNING, no entry stored in dbm for [ENSG00000224511.2] WARNING, no entry stored in dbm for [ENSG00000237746.1] WARNING, no entry stored in dbm for [ENSG00000230615.7] WARNING, no entry stored in dbm for [ENSG00000227000.2] WARNING, no entry stored in dbm for [ENSG00000225636.1] WARNING, no entry stored in dbm for [ENSG00000224494.1] WARNING, no entry stored in dbm for [ENSG00000268191.1] WARNING, no entry stored in dbm for [ENSG00000199843.1] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000185837.3] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000287646.1] WARNING, no entry stored in dbm for [ENSG00000246174.9] WARNING, no entry stored in dbm for [ENSG00000241014.2] WARNING, no entry stored in dbm for [ENSG00000277561.5] WARNING, no entry stored in dbm for [ENSG00000198804.2] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000225963.8] WARNING, no entry stored in dbm for [ENSG00000270666.1] WARNING, no entry stored in dbm for [ENSG00000234336.7] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000235720.1] WARNING, no entry stored in dbm for [ENSG00000224255.2] WARNING, no entry stored in dbm for [ENSG00000213453.3] WARNING, no entry stored in dbm for [ENSG00000276871.1] WARNING, no entry stored in dbm for [ENSG00000277739.1] WARNING, no entry stored in dbm for [ENSG00000275877.1] WARNING, no entry stored in dbm for [ENSG00000283568.1] WARNING, no entry stored in dbm for [ENSG00000283274.1] WARNING, no entry stored in dbm for [ENSG00000234859.5] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000254454.2] WARNING, no entry stored in dbm for [ENSG00000234840.2] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000282882.2] WARNING, no entry stored in dbm for [ENSG00000248290.1] WARNING, no entry stored in dbm for [ENSG00000226688.7] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000287400.1] WARNING, no entry stored in dbm for [ENSG00000227855.3] WARNING, no entry stored in dbm for [ENSG00000250091.3] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000251381.8] WARNING, no entry stored in dbm for [ENSG00000220725.1] WARNING, no entry stored in dbm for [ENSG00000269821.1] WARNING, no entry stored in dbm for [ENSG00000272195.1] WARNING, no entry stored in dbm for [ENSG00000233963.2] WARNING, no entry stored in dbm for [ENSG00000244560.7] WARNING, no entry stored in dbm for [ENSG00000244471.6] WARNING, no entry stored in dbm for [ENSG00000248527.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000174403.16] WARNING, no entry stored in dbm for [ENSG00000247095.3] WARNING, no entry stored in dbm for [ENSG00000250406.2] WARNING, no entry stored in dbm for [ENSG00000215039.7] WARNING, no entry stored in dbm for [ENSG00000249392.1] WARNING, no entry stored in dbm for [ENSG00000273599.1] WARNING, no entry stored in dbm for [ENSG00000215914.4] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000207649.3] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000236105.1] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000237238.3] WARNING, no entry stored in dbm for [ENSG00000271978.1] WARNING, no entry stored in dbm for [ENSG00000247081.8] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000235325.1] WARNING, no entry stored in dbm for [ENSG00000215914.4] WARNING, no entry stored in dbm for [ENSG00000262712.1] WARNING, no entry stored in dbm for [ENSG00000255422.3] WARNING, no entry stored in dbm for [ENSG00000255135.4] WARNING, no entry stored in dbm for [ENSG00000213252.3] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000237669.1] WARNING, no entry stored in dbm for [ENSG00000227959.1] WARNING, no entry stored in dbm for [ENSG00000217477.2] WARNING, no entry stored in dbm for [ENSG00000230615.7] WARNING, no entry stored in dbm for [ENSG00000167046.4] WARNING, no entry stored in dbm for [ENSG00000268926.3] WARNING, no entry stored in dbm for [ENSG00000232936.6] WARNING, no entry stored in dbm for [ENSG00000226578.1] WARNING, no entry stored in dbm for [ENSG00000268858.2] WARNING, no entry stored in dbm for [ENSG00000216316.1] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000241946.1] WARNING, no entry stored in dbm for [ENSG00000276728.1] WARNING, no entry stored in dbm for [ENSG00000274767.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000232729.8] WARNING, no entry stored in dbm for [ENSG00000263731.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000251501.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000271959.1] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000250596.2] WARNING, no entry stored in dbm for [ENSG00000286904.1] WARNING, no entry stored in dbm for [ENSG00000285918.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000240519.1] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000243406.6] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000287875.1] WARNING, no entry stored in dbm for [ENSG00000224516.5] WARNING, no entry stored in dbm for [ENSG00000261386.2] WARNING, no entry stored in dbm for [ENSG00000235140.2] WARNING, no entry stored in dbm for [ENSG00000287677.2] WARNING, no entry stored in dbm for [ENSG00000230647.2] WARNING, no entry stored in dbm for [ENSG00000267284.2] WARNING, no entry stored in dbm for [ENSG00000266290.1] WARNING, no entry stored in dbm for [ENSG00000261416.1] WARNING, no entry stored in dbm for [ENSG00000283695.1] WARNING, no entry stored in dbm for [ENSG00000269867.1] WARNING, no entry stored in dbm for [ENSG00000199843.1] WARNING, no entry stored in dbm for [ENSG00000179342.4] WARNING, no entry stored in dbm for [ENSG00000215914.4] WARNING, no entry stored in dbm for [ENSG00000204929.13] WARNING, no entry stored in dbm for [ENSG00000232618.2] WARNING, no entry stored in dbm for [ENSG00000270677.1] WARNING, no entry stored in dbm for [ENSG00000279865.1] WARNING, no entry stored in dbm for [ENSG00000286125.1] WARNING, no entry stored in dbm for [ENSG00000261786.1] WARNING, no entry stored in dbm for [ENSG00000267469.1] WARNING, no entry stored in dbm for [ENSG00000272568.6] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000282816.1] WARNING, no entry stored in dbm for [ENSG00000093100.13] WARNING, no entry stored in dbm for [ENSG00000231749.3] WARNING, no entry stored in dbm for [ENSG00000268895.6] WARNING, no entry stored in dbm for [ENSG00000203878.11] * STAR-Fusion complete. See output: /tmp/nxf.hginCsZoAb/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)