Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/6dcbe3547e3b9a859eb3598afde8ef/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/6dcbe3547e3b9a859eb3598afde8ef/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/558594968a877da49aa423b821ade7/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/558594968a877da49aa423b821ade7/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/11b55805e0bf2b5b0ebfeda8c3552b/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.hginCsZoAb/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.hginCsZoAb/./star-fusion.preliminary
-sample contains 170947118 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir  -J /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction  -O /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2830000], rate=104814.81/min -building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2660000], rate=90-building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=66666.67/min 
[20000], rate=63157.89/min 
[30000], rate=64285.71/min 
[40000], rate=66666.67/min 
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[1700000], rate=81404.63/min 
[1710000], rate=81622.91/min 
[1720000], rate=81710.21/min 
[1730000], rate=81925.81/min 
[1740000], rate=82204.72/min 
[1750000], rate=82417.58/min 
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[1770000], rate=82710.28/min 
[1780000], rate=82919.25/min 
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[1990000], rate=82916.67/min 
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[2480000], rate=87839.43/min 
[2490000], rate=87779.08/min 
[2500000], rate=87668.03/min 
[2510000], rate=87609.08/min 
[2520000], rate=87652.17/min 
[2530000], rate=87644.34/min 
[2540000], rate=87788.02/min 
[2550000], rate=87931.03/min 
[2560000], rate=87922.15/min 
[2570000], rate=87863.25/min 
[2580000], rate=87854.71/min 
[2590000], rate=87846.24/min 
[2600000], rate=87887.32/min 
[2610000], rate=88076.49/min 
[2620000], rate=88116.59/min 
[2630000], rate=88156.42/min 
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[2650000], rate=88284.29/min 
[2660000], rate=88372.09/min 
[2670000], rate=88508.29/min 
[2680000], rate=88595.04/min 
[2690000], rate=88730.07/min 
[2700000], rate=88864.51/min 
[2710000], rate=89095.89/min 
[2720000], rate=89375.68/min 
[2730000], rate=89655.17/min 
[2740000], rate=89836.07/min 
[2750000], rate=90065.50/min 
[2760000], rate=90196.08/min 
[2770000], rate=90326.09/min 
[2780000], rate=90455.53/min 
[2790000], rate=90535.42/min 
[2800000], rate=90663.79/min 
[2810000], rate=90693.92/min 630.32/min 
[2670000], rate=90713.48/min 
[2680000], rate=90744.92/min 
[2690000], rate=90878.38/min 
[2700000], rate=90909.09/min 
[2710000], rate=91041.43/min 
[2720000], rate=91122.28/min 
[2730000], rate=91202.67/min 
[2740000], rate=91333.33/min 
[2750000], rate=91514.14/min 
[2760000], rate=91542.29/min 
[2770000], rate=91318.68/min 
[2780000], rate=91048.03/min 
[2790000], rate=90731.71/min 
[2800000], rate=90468.50/min 
[2810000], rate=90160.43/min -building interval tree based on /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=46153.85/min 
[20000], rate=44444.44/min 
[30000], rate=48648.65/min 
[40000], rate=48000.00/min 
[50000], rate=49180.33/min 
[60000], rate=51428.57/min 
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[80000], rate=51612.90/min 
[90000], rate=51923.08/min 
[100000], rate=51724.14/min 
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[1390000], rate=84928.72/min 
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[1470000], rate=84644.91/min 
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[1500000], rate=84586.47/min 
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[1530000], rate=84375.00/min 
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[1720000], rate=85856.91/min 
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[1740000], rate=85855.26/min 
[1750000], rate=85365.85/min 
[1760000], rate=85092.67/min 
[1770000], rate=84756.58/min 
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[1790000], rate=84103.37/min 
[1800000], rate=83850.93/min 
[1810000], rate=83667.18/min 
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[1840000], rate=82945.15/min 
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[1870000], rate=82500.00/min 
[1880000], rate=82335.77/min 
[1890000], rate=82233.50/min 
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[1930000], rate=81953.29/min 
[1940000], rate=81799.02/min 
[1950000], rate=81761.01/min 
[1960000], rate=81837.16/min 
[1970000], rate=81799.31/min 
[1980000], rate=81761.87/min 
[1990000], rate=81668.95/min 
[2000000], rate=81688.22/min 
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[2060000], rate=81692.00/min 
[2070000], rate=81764.32/min 
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[2100000], rate=82031.25/min 
[2110000], rate=82101.17/min 
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[2140000], rate=82466.28/min 
[2150000], rate=82533.59/min 
[2160000], rate=82705.81/min 
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[2180000], rate=82942.30/min 
[2190000], rate=83059.42/min 
[2200000], rate=83175.80/min 
[2210000], rate=83343.81/min 
[2220000], rate=83458.65/min 
[2230000], rate=83625.00/min 
[2240000], rate=83686.18/min 
[2250000], rate=83746.90/min 
[2260000], rate=83807.17/min 
[2270000], rate=84074.07/min 
[2280000], rate=84288.35/min 
[2290000], rate=84605.91/min 
[2300000], rate=84923.08/min 
[2310000], rate=85082.87/min 
[2320000], rate=85137.61/min 
[2330000], rate=85243.90/min 
[2340000], rate=85349.54/min 
[2350000], rate=85454.55/min 
[2360000], rate=85558.91/min 
[2370000], rate=85611.08/min 
[2380000], rate=85765.77/min 
[2390000], rate=85714.29/min 
[2400000], rate=85459.94/min 
[2410000], rate=85159.01/min 
[2420000], rate=84961.97/min 
[2430000], rate=84767.44/min 
[2440000], rate=84624.28/min 
[2450000], rate=84434.23/min 
[2460000], rate=84198.52/min 
[2470000], rate=84061.26/min 
[2480000], rate=83878.24/min 
[2490000], rate=83697.48/min 
[2500000], rate=83518.93/min 
[2510000], rate=83296.46/min 
[2520000], rate=83122.59/min 
[2530000], rate=82905.52/min 
[2540000], rate=82781.10/min 
[2550000], rate=82837.03/min 
[2560000], rate=82937.37/min 
[2570000], rate=82548.18/min 
[2580000], rate=82340.43/min 
[2590000], rate=82222.22/min 
[2600000], rate=82105.26/min 
[2610000], rate=82032.48/min 
[2620000], rate=81960.38/min 
[2630000], rate=81804.04/min 
[2640000], rate=81691.59/min 
[2650000], rate=81580.30/min 
[2660000], rate=81470.14/min 
[2670000], rate=81361.10/min 
[2680000], rate=81253.16/min 
[2690000], rate=81187.12/min 
[2700000], rate=81162.32/min 
[2710000], rate=81137.72/min 
[2720000], rate=81032.77/min 
[2730000], rate=80968.86/min 
[2740000], rate=80985.22/min 
[2750000], rate=80961.73/min 
[2760000], rate=80978.00/min 
[2770000], rate=80994.15/min 
[2780000], rate=80970.87/min 
[2790000], rate=80986.94/min 
[2800000], rate=81002.89/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 10000000.00 reads per min processed...  
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 10500000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 10800000.00 reads per min processed...  
 10000000.00 reads per min processed...  
 11000000.00 reads per min processed...  
 10285714.29 reads per min processed...  
 8666666.67 reads per min processed...  
 8400000.00 reads per min processed...  
 7500000.00 reads per min processed...  
 7384615.38 reads per min processed...  
 7285714.29 reads per min processed...  
 7200000.00 reads per min processed...  
 6705882.35 reads per min processed...  
 6666666.67 reads per min processed...  
 6631578.95 reads per min processed...  
 6600000.00 reads per min processed...  
 6571428.57 reads per min processed...  
 6260869.57 reads per min processed...  
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 6214285.71 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5823529.41 reads per min processed...  
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 5675675.68 reads per min processed...  
 5538461.54 reads per min processed...  
 5414634.15 reads per min processed...  
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 5333333.33 reads per min processed...  
 5234042.55 reads per min processed...  
 5250000.00 reads per min processed...  
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 5280000.00 reads per min processed...  
 5294117.65 reads per min processed...  
 5307692.31 reads per min processed...  
 5222222.22 reads per min processed...  
 5236363.64 reads per min processed...  
 5250000.00 reads per min processed...  
 5172413.79 reads per min processed...  
 5186440.68 reads per min processed...  
 5200000.00 reads per min processed...  
 5213114.75 reads per min processed...  
 5225806.45 reads per min processed...  
 5238095.24 reads per min processed...  
 5169230.77 reads per min processed...  
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 5272727.27 reads per min processed...  
 5283582.09 reads per min processed...  
 5294117.65 reads per min processed...  
 5382352.94 reads per min processed...  
 5391304.35 reads per min processed...  
 5478260.87 reads per min processed...  
 5485714.29 reads per min processed...  
 5571428.57 reads per min processed...  
 5577464.79 reads per min processed...  
 5661971.83 reads per min processed...  
 5666666.67 reads per min processed...  
 5594594.59 reads per min processed...  
 5600000.00 reads per min processed...  
 5605263.16 reads per min processed...  
 5610389.61 reads per min processed...  
 5544303.80 reads per min processed...  
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 5560975.61 reads per min processed...  
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 5517241.38 reads per min processed...  
 5460674.16 reads per min processed...  
 5466666.67 reads per min processed...  
 5533333.33 reads per min processed...  
 5538461.54 reads per min processed...  
 5483870.97 reads per min processed...  
 5489361.70 reads per min processed...  
 5494736.84 reads per min processed...  
 5500000.00 reads per min processed...  
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 5510204.08 reads per min processed...  
 5515151.52 reads per min processed...  
 5520000.00 reads per min processed...  
 5524752.48 reads per min processed...  
 5529411.76 reads per min processed...  
 5533980.58 reads per min processed...  
 5538461.54 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.hginCsZoAb/LungN_FFPE_L02_RNA_01_B23LG7FLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -184084.632490
EM: Round [1] log likelihood: -183628.540676
EM: Round [2] log likelihood: -183459.525923
EM: Round [3] log likelihood: -183379.523578
EM: Round [4] log likelihood: -183336.890858
EM: Round [5] log likelihood: -183312.713434
EM: Round [6] log likelihood: -183298.370962
EM: Round [7] log likelihood: -183289.495095
EM: Round [8] log likelihood: -183283.768956
EM: Round [9] log likelihood: -183279.926681
EM: Round [10] log likelihood: -183277.255071
EM: Round [11] log likelihood: -183275.338427
EM: Round [12] log likelihood: -183273.925745
EM: Round [13] log likelihood: -183272.860096
EM: Round [14] log likelihood: -183272.040074
EM: Round [15] log likelihood: -183271.398124
EM: Round [16] log likelihood: -183270.887981
EM: Round [17] log likelihood: -183270.477175
EM: Round [18] log likelihood: -183270.142423
EM: Round [19] log likelihood: -183269.866709
EM: Round [20] log likelihood: -183269.637396
EM: Round [21] log likelihood: -183269.444959
EM: Round [22] log likelihood: -183269.282127
EM: Round [23] log likelihood: -183269.143287
EM: Round [24] log likelihood: -183269.024058
EM: Round [25] log likelihood: -183268.920990
EM: Round [26] log likelihood: -183268.831340
EM: Round [27] log likelihood: -183268.752913
EM: Round [28] log likelihood: -183268.683934
EM: Round [29] log likelihood: -183268.622960
EM: Round [30] log likelihood: -183268.568810
EM: Round [31] log likelihood: -183268.520511
EM: Round [32] log likelihood: -183268.477255
EM: Round [33] log likelihood: -183268.438368
EM: Round [34] log likelihood: -183268.403285
EM: Round [35] log likelihood: -183268.371530
EM: Round [36] log likelihood: -183268.342697
EM: Round [37] log likelihood: -183268.316442
EM: Round [38] log likelihood: -183268.292470
EM: Round [39] log likelihood: -183268.270527
EM: Round [40] log likelihood: -183268.250395
EM: Round [41] log likelihood: -183268.231882
EM: Round [42] log likelihood: -183268.214822
EM: Round [43] log likelihood: -183268.199072
EM: Round [44] log likelihood: -183268.184502
EM: Round [45] log likelihood: -183268.171002
EM: Round [46] log likelihood: -183268.158473
EM: Round [47] log likelihood: -183268.146825
EM: Round [48] log likelihood: -183268.135982
EM: Round [49] log likelihood: -183268.125872
EM: Round [50] log likelihood: -183268.116435
EM: Round [51] log likelihood: -183268.107613
EM: Round [52] log likelihood: -183268.099357
EM: Round [53] log likelihood: -183268.091621
EM: Round [54] log likelihood: -183268.084364
EM: Round [55] log likelihood: -183268.077549
EM: Round [56] log likelihood: -183268.071143
EM: Round [57] log likelihood: -183268.065114
EM: Round [58] log likelihood: -183268.059435
EM: Round [59] log likelihood: -183268.054081
EM: Round [60] log likelihood: -183268.049027
EM: Round [61] log likelihood: -183268.044254
EM: Round [62] log likelihood: -183268.039742
EM: Round [63] log likelihood: -183268.035472
EM: Round [64] log likelihood: -183268.031429
EM: Round [65] log likelihood: -183268.027597
EM: Round [66] log likelihood: -183268.023962
EM: Round [67] log likelihood: -183268.020512
EM: Round [68] log likelihood: -183268.017234
EM: Round [69] log likelihood: -183268.014119
EM: Round [70] log likelihood: -183268.011155
EM: Round [71] log likelihood: -183268.008333
EM: Round [72] log likelihood: -183268.005644
EM: Round [73] log likelihood: -183268.003081
EM: Round [74] log likelihood: -183268.000637
EM: Round [75] log likelihood: -183267.998303
EM: Round [76] log likelihood: -183267.996074
EM: Round [77] log likelihood: -183267.993943
EM: Round [78] log likelihood: -183267.991906
EM: Round [79] log likelihood: -183267.989956
EM: Round [80] log likelihood: -183267.988089
EM: Round [81] log likelihood: -183267.986300
EM: Round [82] log likelihood: -183267.984585
EM: Round [83] log likelihood: -183267.982940
EM: Round [84] log likelihood: -183267.981362
EM: Round [85] log likelihood: -183267.979846
EM: Round [86] log likelihood: -183267.978390
EM: Round [87] log likelihood: -183267.976990
EM: Round [88] log likelihood: -183267.975644
EM: Round [89] log likelihood: -183267.974349
EM: Round [90] log likelihood: -183267.973102
EM: Round [91] log likelihood: -183267.971902
EM: Round [92] log likelihood: -183267.970744
EM: Round [93] log likelihood: -183267.969629
EM: Round [94] log likelihood: -183267.968553
EM: Round [95] log likelihood: -183267.967515
EM: Round [96] log likelihood: -183267.966513
EM: Round [97] log likelihood: -183267.965545
EM: Round [98] log likelihood: -183267.964610
EM: Round [99] log likelihood: -183267.963707
EM: Round [100] log likelihood: -183267.962833
EM: Round [101] log likelihood: -183267.961988
EM: Round [102] log likelihood: -183267.961170
EM: Round [103] log likelihood: -183267.960378
EM: Round [104] log likelihood: -183267.959611
EM: Round [105] log likelihood: -183267.958868
EM: Round [106] log likelihood: -183267.958149
EM: Round [107] log likelihood: -183267.957451
EM: Round [108] log likelihood: -183267.956774
EM: Round [109] log likelihood: -183267.956118
EM: Round [110] log likelihood: -183267.955481
EM: Round [111] log likelihood: -183267.954862
EM: Round [112] log likelihood: -183267.954262
EM: Round [113] log likelihood: -183267.953678
EM: Round [114] log likelihood: -183267.953112
EM: Round [115] log likelihood: -183267.952561
EM: Round [116] log likelihood: -183267.952026
EM: Round [117] log likelihood: -183267.951505
EM: Round [118] log likelihood: -183267.950999
EM: Round [119] log likelihood: -183267.950506
EM: Round [120] log likelihood: -183267.950026
EM: Round [121] log likelihood: -183267.949560
EM: Round [122] log likelihood: -183267.949105
EM: Round [123] log likelihood: -183267.948663
EM: Round [124] log likelihood: -183267.948231
EM: Round [125] log likelihood: -183267.947811
EM: Round [126] log likelihood: -183267.947402
EM: Round [127] log likelihood: -183267.947003
EM: Round [128] log likelihood: -183267.946614
EM: Round [129] log likelihood: -183267.946234
EM: Round [130] log likelihood: -183267.945864
EM: Round [131] log likelihood: -183267.945503
EM: Round [132] log likelihood: -183267.945150
EM: Round [133] log likelihood: -183267.944806
EM: Round [134] log likelihood: -183267.944471
EM: Round [135] log likelihood: -183267.944143
EM: Round [136] log likelihood: -183267.943823
EM: Round [137] log likelihood: -183267.943510
EM: Round [138] log likelihood: -183267.943205
EM: Round [139] log likelihood: -183267.942907
EM: Round [140] log likelihood: -183267.942615
EM: Round [141] log likelihood: -183267.942330
EM: Round [142] log likelihood: -183267.942052
EM: Round [143] log likelihood: -183267.941779
EM: Round [144] log likelihood: -183267.941513
EM: Round [145] log likelihood: -183267.941253
EM: Round [146] log likelihood: -183267.940998
EM: Round [147] log likelihood: -183267.940749
EM: Round [148] log likelihood: -183267.940506
EM: Round [149] log likelihood: -183267.940267
EM: Round [150] log likelihood: -183267.940034
EM: Round [151] log likelihood: -183267.939806
EM: Round [152] log likelihood: -183267.939582
EM: Round [153] log likelihood: -183267.939364
EM: Round [154] log likelihood: -183267.939150
EM: Round [155] log likelihood: -183267.938940
EM: Round [156] log likelihood: -183267.938735
EM: Round [157] log likelihood: -183267.938534
EM: Round [158] log likelihood: -183267.938337
EM: Round [159] log likelihood: -183267.938144
EM: Round [160] log likelihood: -183267.937955
EM: Round [161] log likelihood: -183267.937770
EM: Round [162] log likelihood: -183267.937589
EM: Round [163] log likelihood: -183267.937411
EM: Round [164] log likelihood: -183267.937237
EM: Round [165] log likelihood: -183267.937066
EM: Round [166] log likelihood: -183267.936899
EM: Round [167] log likelihood: -183267.936735
EM: Round [168] log likelihood: -183267.936574
EM: Round [169] log likelihood: -183267.936417
EM: Round [170] log likelihood: -183267.936262
EM: Round [171] log likelihood: -183267.936111
EM: Round [172] log likelihood: -183267.935962
EM: Round [173] log likelihood: -183267.935816
EM: Round [174] log likelihood: -183267.935673
EM: Round [175] log likelihood: -183267.935533
EM: Round [176] log likelihood: -183267.935396
EM: Round [177] log likelihood: -183267.935261
EM: Round [178] log likelihood: -183267.935128
EM: Round [179] log likelihood: -183267.934999
EM: Round [180] log likelihood: -183267.934871
EM: Round [181] log likelihood: -183267.934746
EM: Round [182] log likelihood: -183267.934624
EM: Round [183] log likelihood: -183267.934503
EM: Round [184] log likelihood: -183267.934385
EM: Round [185] log likelihood: -183267.934269
EM: Round [186] log likelihood: -183267.934155
EM: Round [187] log likelihood: -183267.934044
EM: Round [188] log likelihood: -183267.933934
EM: Round [189] log likelihood: -183267.933826
EM: Round [190] log likelihood: -183267.933721
EM: Round [191] log likelihood: -183267.933617
EM: Round [192] log likelihood: -183267.933515
EM: Round [193] log likelihood: -183267.933415
EM: Round [194] log likelihood: -183267.933317
EM: Stopping iterations at round 194 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -183872.616845
EM: Round [1] log likelihood: -183480.149811
EM: Round [2] log likelihood: -183341.439403
EM: Round [3] log likelihood: -183277.319688
EM: Round [4] log likelihood: -183243.760206
EM: Round [5] log likelihood: -183225.026471
EM: Round [6] log likelihood: -183214.069602
EM: Round [7] log likelihood: -183207.376286
EM: Round [8] log likelihood: -183203.109796
EM: Round [9] log likelihood: -183200.278665
EM: Round [10] log likelihood: -183198.330229
EM: Round [11] log likelihood: -183196.945572
EM: Round [12] log likelihood: -183195.933959
EM: Round [13] log likelihood: -183195.177204
EM: Round [14] log likelihood: -183194.599550
EM: Round [15] log likelihood: -183194.150881
EM: Round [16] log likelihood: -183193.797082
EM: Round [17] log likelihood: -183193.514337
EM: Round [18] log likelihood: -183193.285642
EM: Round [19] log likelihood: -183193.098628
EM: Round [20] log likelihood: -183192.944147
EM: Round [21] log likelihood: -183192.815336
EM: Round [22] log likelihood: -183192.706981
EM: Round [23] log likelihood: -183192.615079
EM: Round [24] log likelihood: -183192.536523
EM: Round [25] log likelihood: -183192.468882
EM: Round [26] log likelihood: -183192.410238
EM: Round [27] log likelihood: -183192.359064
EM: Round [28] log likelihood: -183192.314137
EM: Round [29] log likelihood: -183192.274469
EM: Round [30] log likelihood: -183192.239258
EM: Round [31] log likelihood: -183192.207848
EM: Round [32] log likelihood: -183192.179698
EM: Round [33] log likelihood: -183192.154360
EM: Round [34] log likelihood: -183192.131463
EM: Round [35] log likelihood: -183192.110694
EM: Round [36] log likelihood: -183192.091789
EM: Round [37] log likelihood: -183192.074527
EM: Round [38] log likelihood: -183192.058717
EM: Round [39] log likelihood: -183192.044197
EM: Round [40] log likelihood: -183192.030827
EM: Round [41] log likelihood: -183192.018486
EM: Round [42] log likelihood: -183192.007071
EM: Round [43] log likelihood: -183191.996488
EM: Round [44] log likelihood: -183191.986659
EM: Round [45] log likelihood: -183191.977513
EM: Round [46] log likelihood: -183191.968987
EM: Round [47] log likelihood: -183191.961028
EM: Round [48] log likelihood: -183191.953585
EM: Round [49] log likelihood: -183191.946615
EM: Round [50] log likelihood: -183191.940080
EM: Round [51] log likelihood: -183191.933944
EM: Round [52] log likelihood: -183191.928175
EM: Round [53] log likelihood: -183191.922746
EM: Round [54] log likelihood: -183191.917630
EM: Round [55] log likelihood: -183191.912804
EM: Round [56] log likelihood: -183191.908246
EM: Round [57] log likelihood: -183191.903939
EM: Round [58] log likelihood: -183191.899863
EM: Round [59] log likelihood: -183191.896003
EM: Round [60] log likelihood: -183191.892344
EM: Round [61] log likelihood: -183191.888872
EM: Round [62] log likelihood: -183191.885575
EM: Round [63] log likelihood: -183191.882442
EM: Round [64] log likelihood: -183191.879462
EM: Round [65] log likelihood: -183191.876626
EM: Round [66] log likelihood: -183191.873923
EM: Round [67] log likelihood: -183191.871347
EM: Round [68] log likelihood: -183191.868889
EM: Round [69] log likelihood: -183191.866542
EM: Round [70] log likelihood: -183191.864300
EM: Round [71] log likelihood: -183191.862156
EM: Round [72] log likelihood: -183191.860105
EM: Round [73] log likelihood: -183191.858142
EM: Round [74] log likelihood: -183191.856261
EM: Round [75] log likelihood: -183191.854458
EM: Round [76] log likelihood: -183191.852728
EM: Round [77] log likelihood: -183191.851068
EM: Round [78] log likelihood: -183191.849475
EM: Round [79] log likelihood: -183191.847943
EM: Round [80] log likelihood: -183191.846471
EM: Round [81] log likelihood: -183191.845054
EM: Round [82] log likelihood: -183191.843691
EM: Round [83] log likelihood: -183191.842379
EM: Round [84] log likelihood: -183191.841114
EM: Round [85] log likelihood: -183191.839895
EM: Round [86] log likelihood: -183191.838720
EM: Round [87] log likelihood: -183191.837585
EM: Round [88] log likelihood: -183191.836490
EM: Round [89] log likelihood: -183191.835433
EM: Round [90] log likelihood: -183191.834411
EM: Round [91] log likelihood: -183191.833424
EM: Round [92] log likelihood: -183191.832469
EM: Round [93] log likelihood: -183191.831545
EM: Round [94] log likelihood: -183191.830651
EM: Round [95] log likelihood: -183191.829785
EM: Round [96] log likelihood: -183191.828947
EM: Round [97] log likelihood: -183191.828134
EM: Round [98] log likelihood: -183191.827347
EM: Round [99] log likelihood: -183191.826583
EM: Round [100] log likelihood: -183191.825842
EM: Round [101] log likelihood: -183191.825124
EM: Round [102] log likelihood: -183191.824426
EM: Round [103] log likelihood: -183191.823749
EM: Round [104] log likelihood: -183191.823091
EM: Round [105] log likelihood: -183191.822452
EM: Round [106] log likelihood: -183191.821831
EM: Round [107] log likelihood: -183191.821228
EM: Round [108] log likelihood: -183191.820641
EM: Round [109] log likelihood: -183191.820070
EM: Round [110] log likelihood: -183191.819514
EM: Round [111] log likelihood: -183191.818974
EM: Round [112] log likelihood: -183191.818448
EM: Round [113] log likelihood: -183191.817935
EM: Round [114] log likelihood: -183191.817436
EM: Round [115] log likelihood: -183191.816951
EM: Round [116] log likelihood: -183191.816477
EM: Round [117] log likelihood: -183191.816016
EM: Round [118] log likelihood: -183191.815566
EM: Round [119] log likelihood: -183191.815127
EM: Round [120] log likelihood: -183191.814700
EM: Round [121] log likelihood: -183191.814283
EM: Round [122] log likelihood: -183191.813876
EM: Round [123] log likelihood: -183191.813479
EM: Round [124] log likelihood: -183191.813091
EM: Round [125] log likelihood: -183191.812713
EM: Round [126] log likelihood: -183191.812344
EM: Round [127] log likelihood: -183191.811984
EM: Round [128] log likelihood: -183191.811632
EM: Round [129] log likelihood: -183191.811288
EM: Round [130] log likelihood: -183191.810952
EM: Round [131] log likelihood: -183191.810624
EM: Round [132] log likelihood: -183191.810303
EM: Round [133] log likelihood: -183191.809990
EM: Round [134] log likelihood: -183191.809684
EM: Round [135] log likelihood: -183191.809384
EM: Round [136] log likelihood: -183191.809091
EM: Round [137] log likelihood: -183191.808805
EM: Round [138] log likelihood: -183191.808525
EM: Round [139] log likelihood: -183191.808251
EM: Round [140] log likelihood: -183191.807984
EM: Round [141] log likelihood: -183191.807722
EM: Round [142] log likelihood: -183191.807465
EM: Round [143] log likelihood: -183191.807214
EM: Round [144] log likelihood: -183191.806969
EM: Round [145] log likelihood: -183191.806729
EM: Round [146] log likelihood: -183191.806493
EM: Round [147] log likelihood: -183191.806263
EM: Round [148] log likelihood: -183191.806038
EM: Round [149] log likelihood: -183191.805817
EM: Round [150] log likelihood: -183191.805601
EM: Round [151] log likelihood: -183191.805389
EM: Round [152] log likelihood: -183191.805182
EM: Round [153] log likelihood: -183191.804979
EM: Round [154] log likelihood: -183191.804780
EM: Round [155] log likelihood: -183191.804585
EM: Round [156] log likelihood: -183191.804394
EM: Round [157] log likelihood: -183191.804207
EM: Round [158] log likelihood: -183191.804024
EM: Round [159] log likelihood: -183191.803844
EM: Round [160] log likelihood: -183191.803668
EM: Round [161] log likelihood: -183191.803495
EM: Round [162] log likelihood: -183191.803326
EM: Round [163] log likelihood: -183191.803161
EM: Round [164] log likelihood: -183191.802998
EM: Round [165] log likelihood: -183191.802839
EM: Round [166] log likelihood: -183191.802682
EM: Round [167] log likelihood: -183191.802529
EM: Round [168] log likelihood: -183191.802379
EM: Round [169] log likelihood: -183191.802232
EM: Round [170] log likelihood: -183191.802087
EM: Round [171] log likelihood: -183191.801946
EM: Round [172] log likelihood: -183191.801807
EM: Round [173] log likelihood: -183191.801670
EM: Round [174] log likelihood: -183191.801537
EM: Round [175] log likelihood: -183191.801405
EM: Round [176] log likelihood: -183191.801277
EM: Round [177] log likelihood: -183191.801151
EM: Round [178] log likelihood: -183191.801027
EM: Round [179] log likelihood: -183191.800905
EM: Round [180] log likelihood: -183191.800786
EM: Round [181] log likelihood: -183191.800669
EM: Round [182] log likelihood: -183191.800554
EM: Round [183] log likelihood: -183191.800441
EM: Round [184] log likelihood: -183191.800331
EM: Round [185] log likelihood: -183191.800222
EM: Round [186] log likelihood: -183191.800116
EM: Round [187] log likelihood: -183191.800011
EM: Round [188] log likelihood: -183191.799908
EM: Round [189] log likelihood: -183191.799807
EM: Round [190] log likelihood: -183191.799708
EM: Stopping iterations at round 190 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 170947118 > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir --annotate /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir
-done, see /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 937, filtered: 8138)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.hginCsZoAb/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.hginCsZoAb/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
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WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000279182.1]
WARNING, no entry stored in dbm for [ENSG00000272195.1]
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WARNING, no entry stored in dbm for [ENSG00000146556.14]
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WARNING, no entry stored in dbm for [ENSG00000215105.4]
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WARNING, no entry stored in dbm for [ENSG00000170919.16]
WARNING, no entry stored in dbm for [ENSG00000263878.2]
WARNING, no entry stored in dbm for [ENSG00000250316.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000215835.2]
WARNING, no entry stored in dbm for [ENSG00000253328.2]
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WARNING, no entry stored in dbm for [ENSG00000215039.7]
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WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000276721.1]
WARNING, no entry stored in dbm for [ENSG00000235831.7]
WARNING, no entry stored in dbm for [ENSG00000243560.3]
WARNING, no entry stored in dbm for [ENSG00000272767.1]
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WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000258412.1]
WARNING, no entry stored in dbm for [ENSG00000231894.2]
WARNING, no entry stored in dbm for [ENSG00000125804.14]
WARNING, no entry stored in dbm for [ENSG00000241946.1]
WARNING, no entry stored in dbm for [ENSG00000215457.5]
WARNING, no entry stored in dbm for [ENSG00000281087.1]
WARNING, no entry stored in dbm for [ENSG00000286510.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000274452.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000222414.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000222328.1]
WARNING, no entry stored in dbm for [ENSG00000222355.1]
WARNING, no entry stored in dbm for [ENSG00000274585.1]
WARNING, no entry stored in dbm for [ENSG00000252866.1]
WARNING, no entry stored in dbm for [ENSG00000202187.1]
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WARNING, no entry stored in dbm for [ENSG00000201041.1]
WARNING, no entry stored in dbm for [ENSG00000252866.1]
WARNING, no entry stored in dbm for [ENSG00000207186.1]
WARNING, no entry stored in dbm for [ENSG00000272469.2]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000244335.3]
WARNING, no entry stored in dbm for [ENSG00000266828.2]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000265093.2]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000275776.1]
WARNING, no entry stored in dbm for [ENSG00000264275.1]
WARNING, no entry stored in dbm for [ENSG00000222706.1]
WARNING, no entry stored in dbm for [ENSG00000222448.1]
WARNING, no entry stored in dbm for [ENSG00000248148.1]
WARNING, no entry stored in dbm for [ENSG00000230454.1]
WARNING, no entry stored in dbm for [ENSG00000287641.1]
WARNING, no entry stored in dbm for [ENSG00000258525.2]
WARNING, no entry stored in dbm for [ENSG00000240704.1]
WARNING, no entry stored in dbm for [ENSG00000227214.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000214975.4]
WARNING, no entry stored in dbm for [ENSG00000242613.1]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000067601.8]
WARNING, no entry stored in dbm for [ENSG00000285051.2]
WARNING, no entry stored in dbm for [ENSG00000267475.1]
WARNING, no entry stored in dbm for [ENSG00000225308.2]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000231686.1]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000256075.1]
WARNING, no entry stored in dbm for [ENSG00000282164.3]
WARNING, no entry stored in dbm for [ENSG00000205918.9]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000234807.7]
WARNING, no entry stored in dbm for [ENSG00000259324.2]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000283667.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000287718.1]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000239650.4]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000285215.2]
WARNING, no entry stored in dbm for [ENSG00000276735.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000244625.7]
WARNING, no entry stored in dbm for [ENSG00000235271.6]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000277319.1]
WARNING, no entry stored in dbm for [ENSG00000281202.2]
WARNING, no entry stored in dbm for [ENSG00000259069.1]
WARNING, no entry stored in dbm for [ENSG00000228063.2]
WARNING, no entry stored in dbm for [ENSG00000182366.10]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000261064.1]
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WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000248693.1]
WARNING, no entry stored in dbm for [ENSG00000253301.6]
WARNING, no entry stored in dbm for [ENSG00000237339.5]
WARNING, no entry stored in dbm for [ENSG00000239921.6]
WARNING, no entry stored in dbm for [ENSG00000233621.2]
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WARNING, no entry stored in dbm for [ENSG00000273148.1]
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WARNING, no entry stored in dbm for [ENSG00000224511.2]
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WARNING, no entry stored in dbm for [ENSG00000185837.3]
WARNING, no entry stored in dbm for [ENSG00000229124.7]
WARNING, no entry stored in dbm for [ENSG00000287646.1]
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WARNING, no entry stored in dbm for [ENSG00000241014.2]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000198804.2]
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WARNING, no entry stored in dbm for [ENSG00000225963.8]
WARNING, no entry stored in dbm for [ENSG00000270666.1]
WARNING, no entry stored in dbm for [ENSG00000234336.7]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000235720.1]
WARNING, no entry stored in dbm for [ENSG00000224255.2]
WARNING, no entry stored in dbm for [ENSG00000213453.3]
WARNING, no entry stored in dbm for [ENSG00000276871.1]
WARNING, no entry stored in dbm for [ENSG00000277739.1]
WARNING, no entry stored in dbm for [ENSG00000275877.1]
WARNING, no entry stored in dbm for [ENSG00000283568.1]
WARNING, no entry stored in dbm for [ENSG00000283274.1]
WARNING, no entry stored in dbm for [ENSG00000234859.5]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000254454.2]
WARNING, no entry stored in dbm for [ENSG00000234840.2]
WARNING, no entry stored in dbm for [ENSG00000249072.1]
WARNING, no entry stored in dbm for [ENSG00000282882.2]
WARNING, no entry stored in dbm for [ENSG00000248290.1]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000287400.1]
WARNING, no entry stored in dbm for [ENSG00000227855.3]
WARNING, no entry stored in dbm for [ENSG00000250091.3]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000251381.8]
WARNING, no entry stored in dbm for [ENSG00000220725.1]
WARNING, no entry stored in dbm for [ENSG00000269821.1]
WARNING, no entry stored in dbm for [ENSG00000272195.1]
WARNING, no entry stored in dbm for [ENSG00000233963.2]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000244471.6]
WARNING, no entry stored in dbm for [ENSG00000248527.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000174403.16]
WARNING, no entry stored in dbm for [ENSG00000247095.3]
WARNING, no entry stored in dbm for [ENSG00000250406.2]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000249392.1]
WARNING, no entry stored in dbm for [ENSG00000273599.1]
WARNING, no entry stored in dbm for [ENSG00000215914.4]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000207649.3]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000236105.1]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000235325.1]
WARNING, no entry stored in dbm for [ENSG00000215914.4]
WARNING, no entry stored in dbm for [ENSG00000262712.1]
WARNING, no entry stored in dbm for [ENSG00000255422.3]
WARNING, no entry stored in dbm for [ENSG00000255135.4]
WARNING, no entry stored in dbm for [ENSG00000213252.3]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000237669.1]
WARNING, no entry stored in dbm for [ENSG00000227959.1]
WARNING, no entry stored in dbm for [ENSG00000217477.2]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000167046.4]
WARNING, no entry stored in dbm for [ENSG00000268926.3]
WARNING, no entry stored in dbm for [ENSG00000232936.6]
WARNING, no entry stored in dbm for [ENSG00000226578.1]
WARNING, no entry stored in dbm for [ENSG00000268858.2]
WARNING, no entry stored in dbm for [ENSG00000216316.1]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000241946.1]
WARNING, no entry stored in dbm for [ENSG00000276728.1]
WARNING, no entry stored in dbm for [ENSG00000274767.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000263731.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000251501.1]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000271959.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000250596.2]
WARNING, no entry stored in dbm for [ENSG00000286904.1]
WARNING, no entry stored in dbm for [ENSG00000285918.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000240519.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000243406.6]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000257337.7]
WARNING, no entry stored in dbm for [ENSG00000287875.1]
WARNING, no entry stored in dbm for [ENSG00000224516.5]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000235140.2]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000230647.2]
WARNING, no entry stored in dbm for [ENSG00000267284.2]
WARNING, no entry stored in dbm for [ENSG00000266290.1]
WARNING, no entry stored in dbm for [ENSG00000261416.1]
WARNING, no entry stored in dbm for [ENSG00000283695.1]
WARNING, no entry stored in dbm for [ENSG00000269867.1]
WARNING, no entry stored in dbm for [ENSG00000199843.1]
WARNING, no entry stored in dbm for [ENSG00000179342.4]
WARNING, no entry stored in dbm for [ENSG00000215914.4]
WARNING, no entry stored in dbm for [ENSG00000204929.13]
WARNING, no entry stored in dbm for [ENSG00000232618.2]
WARNING, no entry stored in dbm for [ENSG00000270677.1]
WARNING, no entry stored in dbm for [ENSG00000279865.1]
WARNING, no entry stored in dbm for [ENSG00000286125.1]
WARNING, no entry stored in dbm for [ENSG00000261786.1]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000272568.6]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000282816.1]
WARNING, no entry stored in dbm for [ENSG00000093100.13]
WARNING, no entry stored in dbm for [ENSG00000231749.3]
WARNING, no entry stored in dbm for [ENSG00000268895.6]
WARNING, no entry stored in dbm for [ENSG00000203878.11]


	* STAR-Fusion complete.  See output: /tmp/nxf.hginCsZoAb/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)