-ctat genome lib [/tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary -sample contains 293914112 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir -J /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -O /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=92307.69/min [30000], rate=90000.00/min [40000], rate=96000.00/min [50000], rate=93750.00/min [60000], rate=94736.84/min [70000], rate=97674.42/min [80000], rate=97959.18/min [90000], rate=100000.00/min [100000], rate=96774.19/min [110000], rate=98507.46/min [120000], rate=100000.00/min [130000], rate=86666.67/min [140000], rate=76363.64/min [150000], rate=68181.82/min [160000], rate=63157.89/min [170000], rate=60355.03/min [180000], rate=57142.86/min [190000], rate=55072.46/min [200000], rate=53571.43/min [210000], rate=52282.16/min [220000], rate=51361.87/min [230000], rate=50000.00/min [240000], rate=49146.76/min [250000], rate=48701.30/min [260000], rate=48297.21/min [270000], rate=47928.99/min [280000], rate=47592.07/min [290000], rate=47027.03/min [300000], rate=46632.12/min [310000], rate=45925.93/min [320000], rate=45390.07/min [330000], rate=44897.96/min [340000], rate=44835.16/min [350000], rate=44871.79/min [360000], rate=44813.28/min [370000], rate=44939.27/min [380000], rate=45328.03/min [390000], rate=45703.12/min [400000], rate=46065.26/min [410000], rate=46240.60/min [420000], rate=46238.53/min [430000], rate=46402.88/min [440000], rate=46560.85/min [450000], rate=46793.76/min [460000], rate=47018.74/min [470000], rate=47315.44/min [480000], rate=47524.75/min [490000], rate=47882.74/min [500000], rate=48076.92/min [510000], rate=48264.98/min [520000], rate=48598.13/min [530000], rate=48847.93/min [540000], rate=49016.64/min [550000], rate=49180.33/min [560000], rate=49339.21/min [570000], rate=49493.49/min [580000], rate=49643.37/min [590000], rate=49859.15/min [600000], rate=50069.54/min [610000], rate=50274.73/min [620000], rate=50474.90/min [630000], rate=50738.26/min [640000], rate=50996.02/min [650000], rate=51181.10/min [660000], rate=51495.45/min [670000], rate=51737.45/min [680000], rate=51974.52/min [690000], rate=52206.81/min [700000], rate=52500.00/min [710000], rate=52788.10/min [720000], rate=53071.25/min [730000], rate=53414.63/min [740000], rate=53883.50/min [750000], rate=54282.27/min [760000], rate=54610.78/min [770000], rate=54934.60/min [780000], rate=55188.68/min [790000], rate=55568.58/min [800000], rate=55878.93/min [810000], rate=56184.97/min [820000], rate=56486.80/min [830000], rate=56784.49/min [840000], rate=57078.14/min [850000], rate=57497.18/min [860000], rate=57847.53/min [870000], rate=58129.18/min [880000], rate=58536.59/min [890000], rate=58875.41/min [900000], rate=59210.53/min [910000], rate=59541.98/min [920000], rate=59546.93/min [930000], rate=59551.76/min [940000], rate=59619.45/min [950000], rate=59685.86/min [960000], rate=59813.08/min [970000], rate=60000.00/min [980000], rate=60061.29/min [990000], rate=60243.41/min [1000000], rate=60422.96/min [1010000], rate=60418.74/min [1020000], rate=60594.06/min [1030000], rate=60826.77/min [1040000], rate=61056.75/min [1050000], rate=61284.05/min [1060000], rate=61449.28/min [1070000], rate=61553.21/min [1080000], rate=61596.96/min [1090000], rate=61698.11/min [1100000], rate=61855.67/min [1110000], rate=62068.97/min [1120000], rate=62279.89/min [1130000], rate=62546.13/min [1140000], rate=62752.29/min [1150000], rate=62956.20/min [1160000], rate=63157.89/min [1170000], rate=63243.24/min [1180000], rate=63440.86/min [1190000], rate=63693.13/min [1200000], rate=64228.37/min [1210000], rate=64705.88/min [1220000], rate=65182.55/min [1230000], rate=65658.36/min [1240000], rate=66192.17/min [1250000], rate=66666.67/min [1260000], rate=67140.32/min [1270000], rate=67673.18/min [1280000], rate=68145.52/min [1290000], rate=68617.02/min [1300000], rate=69148.94/min [1310000], rate=69619.13/min [1320000], rate=70088.50/min [1330000], rate=70619.47/min [1340000], rate=71087.53/min [1350000], rate=71491.62/min [1360000], rate=71894.27/min [1370000], rate=72231.99/min [1380000], rate=72377.62/min [1390000], rate=72395.83/min [1400000], rate=72790.29/min [1410000], rate=73056.99/min [1420000], rate=73385.01/min [1430000], rate=73901.81/min [1440000], rate=74354.56/min [1450000], rate=74870.91/min [1460000], rate=75387.26/min [1470000], rate=75838.35/min [1480000], rate=76354.26/min [1490000], rate=76804.12/min [1500000], rate=77319.59/min [1510000], rate=77568.49/min [1520000], rate=77683.13/min [1530000], rate=77730.74/min [1540000], rate=77647.06/min [1550000], rate=78020.13/min [1560000], rate=78260.87/min [1570000], rate=78239.20/min [1580000], rate=78217.82/min [1590000], rate=78196.72/min [1600000], rate=78112.29/min [1610000], rate=78472.79/min [1620000], rate=78896.10/min [1630000], rate=79318.73/min [1640000], rate=79805.35/min [1650000], rate=80226.90/min [1660000], rate=80713.13/min [1670000], rate=81002.43/min [1680000], rate=81094.13/min [1690000], rate=81250.00/min [1700000], rate=81145.58/min [1710000], rate=80787.40/min [1720000], rate=81004.71/min [1730000], rate=81157.15/min [1740000], rate=81498.83/min [1750000], rate=81967.21/min [1760000], rate=82371.29/min [1770000], rate=82839.31/min [1780000], rate=83307.33/min [1790000], rate=83710.05/min [1800000], rate=84177.71/min [1810000], rate=84579.44/min [1820000], rate=85046.73/min [1830000], rate=85182.31/min [1840000], rate=85250.97/min [1850000], rate=85318.99/min [1860000], rate=85714.29/min [1870000], rate=86108.98/min [1880000], rate=86503.07/min [1890000], rate=86963.19/min [1900000], rate=87356.32/min [1910000], rate=87748.85/min [1920000], rate=88208.27/min [1930000], rate=88667.69/min [1940000], rate=89058.91/min [1950000], rate=89517.98/min [1960000], rate=89908.26/min [1970000], rate=90297.94/min [1980000], rate=90687.02/min [1990000], rate=91075.51/min [2000000], rate=91463.41/min [2010000], rate=91641.34/min [2020000], rate=91818.18/min [2030000], rate=91647.86/min [2040000], rate=91207.15/min [2050000], rate=91111.11/min [2060000], rate=91420.12/min [2070000], rate=91323.53/min [2080000], rate=91629.96/min [2090000], rate=92002.93/min [2100000], rate=92375.37/min [2110000], rate=92815.25/min [2120000], rate=93186.81/min [2130000], rate=93557.83/min [2140000], rate=93997.07/min [2150000], rate=94367.23/min [2160000], rate=94736.84/min [2170000], rate=94553.38/min [2180000], rate=94372.29/min [2190000], rate=94396.55/min [2200000], rate=94488.19/min [2210000], rate=94781.99/min [2220000], rate=95142.86/min [2230000], rate=95571.43/min [2240000], rate=95931.48/min [2250000], rate=96291.01/min [2260000], rate=96306.82/min [2270000], rate=96254.42/min [2280000], rate=96270.23/min [2290000], rate=96083.92/min [2300000], rate=95966.62/min [2310000], rate=96316.89/min [2320000], rate=96666.67/min [2330000], rate=97015.96/min [2340000], rate=97432.34/min [2350000], rate=97780.86/min [2360000], rate=98196.95/min [2370000], rate=98408.30/min [2380000], rate=98618.78/min [2390000], rate=98692.36/min [2400000], rate=98697.74/min [2410000], rate=98770.49/min [2420000], rate=99045.02/min [2430000], rate=99251.19/min [2440000], rate=99389.00/min [2450000], rate=99056.60/min [2460000], rate=99393.94/min [2470000], rate=99797.98/min [2480000], rate=100134.59/min [2490000], rate=100470.75/min [2500000], rate=100401.61/min [2510000], rate=100333.11/min [2520000], rate=100198.81/min [2530000], rate=100264.20/min [2540000], rate=100594.06/min [2550000], rate=100459.62/min [2560000], rate=100326.58/min [2570000], rate=100260.08/min [2580000], rate=100194.17/min [2590000], rate=99935.69/min [2600000], rate=99808.06/min [2610000], rate=99808.80/min [2620000], rate=99809.52/min [2630000], rate=99810.25/min [2640000], rate=99873.90/min [2650000], rate=99624.06/min [2660000], rate=99625.47/min [2670000], rate=99256.51/min [2680000], rate=99014.78/min [2690000], rate=98534.80/min [2700000], rate=97472.92/min [2710000], rate=9-building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=109090.91/min [30000], rate=112500.00/min [40000], rate=114285.71/min [50000], rate=111111.11/min [60000], rate=120000.00/min [70000], rate=116666.67/min [80000], rate=100000.00/min [90000], rate=83076.92/min [100000], rate=75000.00/min [110000], rate=68041.24/min [120000], rate=65454.55/min [130000], rate=62903.23/min [140000], rate=60431.65/min [150000], rate=58823.53/min [160000], rate=57142.86/min [170000], rate=56666.67/min [180000], rate=55670.10/min [190000], rate=55882.35/min [200000], rate=55813.95/min [210000], rate=55506.61/min [220000], rate=55462.18/min [230000], rate=55421.69/min [240000], rate=55384.62/min [250000], rate=55350.55/min [260000], rate=55319.15/min [270000], rate=55290.10/min [280000], rate=55629.14/min [290000], rate=56129.03/min [300000], rate=56426.33/min [310000], rate=56707.32/min [320000], rate=56637.17/min [330000], rate=56896.55/min [340000], rate=57627.12/min [350000], rate=58333.33/min [360000], rate=59016.39/min [370000], rate=59517.43/min [380000], rate=60158.31/min [390000], rate=60309.28/min [400000], rate=60606.06/min [410000], rate=61194.03/min [420000], rate=61613.69/min [430000], rate=61575.18/min [440000], rate=61395.35/min [450000], rate=61085.97/min [460000], rate=60659.34/min [470000], rate=60515.02/min [480000], rate=60504.20/min [490000], rate=60245.90/min [500000], rate=60000.00/min [510000], rate=59765.62/min [520000], rate=59541.98/min [530000], rate=59550.56/min [540000], rate=59449.54/min [550000], rate=59245.96/min [560000], rate=59259.26/min [570000], rate=59169.55/min [580000], rate=59284.50/min [590000], rate=59495.80/min [600000], rate=59602.65/min [610000], rate=59803.92/min [620000], rate=60194.17/min [630000], rate=60287.08/min [640000], rate=60282.57/min [650000], rate=60371.52/min [660000], rate=60550.46/min [670000], rate=60725.08/min [680000], rate=60895.52/min [690000], rate=61152.14/min [700000], rate=61403.51/min [710000], rate=61649.78/min [720000], rate=61979.91/min [730000], rate=62393.16/min [740000], rate=62800.57/min [750000], rate=63113.60/min [760000], rate=63421.42/min [770000], rate=63724.14/min [780000], rate=63847.20/min [790000], rate=64054.05/min [800000], rate=64257.03/min [810000], rate=64541.83/min [820000], rate=64822.13/min [830000], rate=65098.04/min [840000], rate=65369.65/min [850000], rate=65721.65/min [860000], rate=66069.14/min [870000], rate=66412.21/min [880000], rate=66750.95/min [890000], rate=67085.43/min [900000], rate=67331.67/min [910000], rate=67657.99/min [920000], rate=67980.30/min [930000], rate=68382.35/min [940000], rate=68363.64/min [950000], rate=68019.09/min [960000], rate=67685.08/min [970000], rate=67361.11/min [980000], rate=67123.29/min [990000], rate=66816.65/min [1000000], rate=66592.67/min [1010000], rate=66301.97/min [1020000], rate=66090.71/min [1030000], rate=65814.70/min [1040000], rate=65615.14/min [1050000], rate=65556.71/min [1060000], rate=65432.10/min [1070000], rate=65177.66/min [1080000], rate=64929.86/min [1090000], rate=64880.95/min [1100000], rate=64705.88/min [1110000], rate=64597.48/min [1120000], rate=64429.53/min [1130000], rate=63962.26/min [1140000], rate=63627.91/min [1150000], rate=63477.46/min [1160000], rate=63503.65/min [1170000], rate=63586.96/min [1180000], rate=63384.06/min [1190000], rate=63354.04/min [1200000], rate=63157.89/min [1210000], rate=63075.59/min [1220000], rate=62832.62/min [1230000], rate=62755.10/min [1240000], rate=62626.26/min [1250000], rate=62500.00/min [1260000], rate=62479.34/min [1270000], rate=62510.25/min [1280000], rate=62591.69/min [1290000], rate=62672.06/min [1300000], rate=62350.12/min [1310000], rate=62331.48/min [1320000], rate=62215.24/min [1330000], rate=62490.21/min [1340000], rate=62229.10/min [1350000], rate=61784.90/min [1360000], rate=61307.29/min [1370000], rate=61206.25/min [1380000], rate=61333.33/min [1390000], rate=61233.48/min [1400000], rate=61224.49/min [1410000], rate=61259.96/min [1420000], rate=61162.96/min [1430000], rate=60851.06/min [1440000], rate=60504.20/min [1450000], rate=60500.70/min [1460000], rate=60664.82/min [1470000], rate=60869.57/min [1480000], rate=60821.92/min [1490000], rate=60202.02/min [1500000], rate=59484.47/min [1510000], rate=58413.93/min [1520000], rate=58015.27/min [1530000], rate=57089.55/min [1540000], rate=55966.08/min [1550000], rate=55788.84/min [1560000], rate=55648.04/min [1570000], rate=55640.87/min [1580000], rate=55148.34/min [1590000], rate=54701.83/min [1600000], rate=54483.54/min [1610000], rate=53876.19/min [1620000], rate=53085.75/min [1630000], rate=52608.93/min [1640000], rate=51898.73/min [1650000], rate=51321.93/min [1660000], rate=50738.67/min [1670000], rate=50150.15/min [1680000], rate=49606.30/min [1690000], rate=49367.09/min [1700000], rate=49085.66/min [1710000], rate=48787.45/min [1720000], rate=48473.46/min [1730000], rate=48100.09/min [1740000], rate=47671.23/min [1750000], rate=47276.00/min [1760000], rate=47058.82/min [1770000], rate=47011.95/min [1780000], rate=47069.19/min [1790000], rate=47146.62/min [1800000], rate=47182.18/min [1810000], rate=47258.49/min [1820000], rate=47293.20/min [1830000], rate=47347.99/min [1840000], rate=47422.68/min [1850000], rate=47496.79/min [1860000], rate=47570.33/min [1870000], rate=47663.55/min [1880000], rate=47776.37/min [1890000], rate=47888.51/min [1900000], rate=48020.22/min [1910000], rate=48110.83/min [1920000], rate=48200.84/min [1930000], rate=48310.39/min [1940000], rate=48419.30/min [1950000], rate=48487.36/min [1960000], rate=48574.97/min [1970000], rate=48482.36/min [1980000], rate=48292.68/min [1990000], rate=48028.96/min [2000000], rate=47865.98/min [2010000], rate=47876.14/min [2020000], rate=48038.05/min [2030000], rate=48142.29/min [2040000], rate=48264.98/min [2050000], rate=48387.10/min [2060000], rate=48546.74/min [2070000], rate=48686.79/min [2080000], rate=48807.20/min [2090000], rate=48927.04/min [2100000], rate=49065.42/min [2110000], rate=49184.15/min [2120000], rate=49321.44/min [2130000], rate=49153.85/min [2140000], rate=48932.93/min [2150000], rate=48919.23/min [2160000], rate=48905.66/min [2170000], rate=48947.37/min [2180000], rate=48952.10/min [2190000], rate=48811.29/min [2200000], rate=48816.57/min [2210000], rate=48696.29/min [2220000], rate=48208.47/min [2230000], rate=47888.33/min [2240000], rate=47914.44/min [2250000], rate=47923.32/min [2260000], rate=47932.13/min [2270000], rate=47974.64/min [2280000], rate=48033.71/min [2290000], rate=47924.66/min [2300000], rate=47900.03/min [2310000], rate=47958.48/min [2320000], rate=47851.50/min [2330000], rate=47925.95/min [2340000], rate=47983.60/min [2350000], rate=48057.26/min [2360000], rate=48146.89/min [2370000], rate=48219.74/min [2380000], rate=48308.53/min [2390000], rate=48380.57/min [2400000], rate=48322.15/min [2410000], rate=48280.47/min [2420000], rate=48223.18/min [2430000], rate=48087.07/min [2440000], rate=48000.00/min [2450000], rate=47945.21/min [2460000], rate=47968.80/min [2470000], rate=48085.66/min [2480000], rate=48186.53/min [2490000], rate=48209.10/min [2500000], rate=48030.74/min [2510000], rate=47748.89/min [2520000], rate=47427.85/min [2530000], rate=47113.59/min [2540000], rate=46820.28/min [2550000], rate=46846.30/min [2560000], rate=46872.14/min [2570000], rate=46869.30/min [2580000], rate=46880.68/min [2590000], rate=46877.83/min [2600000], rate=46917.29/min [2610000], rate=46956.52/min [2620000], rate=46995.52/min [2630000], rate=47034.28/min [2640000], rate=47058.82/min [2650000], rate=47097.16/min [2660000], rate=47135.26/min [2670000], rate=47200.94/min [2680000], rate=47252.42/min [2690000], rate=47317.50/min [2700000], rate=47354.57/min [2710000], rate=47419.6441.28/min [2720000], rate=95606.33/min [2730000], rate=95510.20/min [2740000], rate=95414.97/min [2750000], rate=94664.37/min [2760000], rate=94412.77/min [2770000], rate=94378.19/min [2780000], rate=94397.28/min [2790000], rate=94363.02/min [2800000], rate=94329.03/min [2810000], rate=94242.59/min [2820000], rate=94314.38/min [2830000], rate=94280.96/min [2840000], rate=94352.16/min [2850000], 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rate=65977.25/min [3200000], rate=65573.77/min [3210000], rate=65089.56/min [3220000], rate=64593.78/min [3230000], rate=64278.61/min [3240000], rate=63968.41/min [3250000], rate=63683.87/min [3260000], rate=63321.46/min [3270000], rate=62904.78/min [3280000], rate=62535.75/min [3290000], rate=62153.65/min [3300000], rate=61971.83/min [3310000], rate=61619.61/min [3320000], rate=61273.45/min [3330000], rate=60914.63/min [3340000], rate=60635.40/min [3350000], rate=60324.13/min [3360000], rate=60035.74/min [3370000], rate=59787.11/min [3380000], rate=59559.47/min [3390000], rate=59369.53/min [3400000], rate=59216.26/min [3410000], rate=59081.72/min [3420000], rate=59033.37/min [3430000], rate=58917.84/min -building interval tree based on /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=112500.00/min [40000], rate=104347.83/min 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rate=51057.69/min [1780000], rate=51173.93/min [1790000], rate=51289.40/min [1800000], rate=51428.57/min [1810000], rate=51542.48/min [1820000], rate=51655.63/min [1830000], rate=51768.03/min [1840000], rate=51928.50/min [1850000], rate=52063.79/min [1860000], rate=52222.74/min [1870000], rate=52356.51/min [1880000], rate=52489.53/min [1890000], rate=52427.18/min [1900000], rate=52102.38/min [1910000], rate=51761.52/min [1920000], rate=51520.57/min [1930000], rate=50413.58/min [1940000], rate=49426.75/min [1950000], rate=48467.27/min [1960000], rate=48000.00/min [1970000], rate=47912.44/min [1980000], rate=47806.84/min [1990000], rate=47721.82/min [2000000], rate=47619.05/min [2010000], rate=47424.30/min [2020000], rate=46940.36/min [2030000], rate=46846.15/min [2040000], rate=46681.92/min [2050000], rate=46345.14/min [2060000], rate=46085.01/min [2070000], rate=45931.95/min [2080000], rate=45564.07/min [2090000], rate=45238.10/min [2100000], rate=45161.29/min [2110000], rate=45069.42/min [2120000], rate=44915.25/min [2130000], rate=44591.77/min [2140000], rate=44199.66/min [2150000], rate=43758.48/min [2160000], rate=43402.55/min [2170000], rate=43126.86/min [2180000], rate=42731.13/min [2190000], rate=42346.12/min [2200000], rate=42051.61/min [2210000], rate=41790.10/min [2220000], rate=41560.06/min [2230000], rate=41398.51/min [2240000], rate=41176.47/min [2250000], rate=41020.97/min [2260000], rate=40769.69/min [2270000], rate=40463.46/min [2280000], rate=40235.29/min [2290000], rate=39941.86/min [2300000], rate=39735.10/min [2310000], rate=39645.31/min [2320000], rate=39444.60/min [2330000], rate=39413.59/min [2340000], rate=39283.72/min [2350000], rate=39112.34/min [2360000], rate=39040.53/min [2370000], rate=38799.45/min [2380000], rate=38532.11/min [2390000], rate=38445.04/min [2400000], rate=38236.86/min [2410000], rate=38002.63/min [2420000], rate=38080.25/min [2430000], rate=38147.57/min [2440000], rate=38214.57/min [2450000], rate=38271.28/min [2460000], rate=38307.81/min [2470000], rate=38344.11/min [2480000], rate=38390.09/min [2490000], rate=38416.05/min [2500000], rate=38471.40/min [2510000], rate=38536.34/min [2520000], rate=38600.97/min [2530000], rate=38655.46/min [2540000], rate=38729.35/min [2550000], rate=38802.94/min [2560000], rate=38856.56/min [2570000], rate=38919.74/min [2580000], rate=38972.81/min [2590000], rate=39045.23/min [2600000], rate=39136.98/min [2610000], rate=39218.63/min [2620000], rate=39300.00/min [2630000], rate=39390.91/min [2640000], rate=39471.72/min [2650000], rate=39562.08/min [2660000], rate=39642.32/min [2670000], rate=39742.00/min [2680000], rate=39811.83/min [2690000], rate=39871.54/min [2700000], rate=39940.83/min [2710000], rate=39990.16/min .00/min [2680000], rate=43283.98/min [2690000], rate=43282.38/min [2700000], rate=43303.93/min [2710000], rate=43233.18/min [2720000], rate=43220.34/min [2730000], rate=43264.66/min [2740000], rate=43297.34/min [2750000], rate=43318.46/min [2760000], rate=43362.14/min [2770000], rate=43382.93/min [2780000], rate=43403.59/min [2790000], rate=43401.61/min [2800000], rate=43198.77/min [2810000], rate=43219.69/min [2820000], rate=43251.53/min [2830000], rate=43250.13/min [2840000], rate=43270.70/min [2850000], rate=43302.10/min [2860000], rate=43322.39/min [2870000], rate=43353.47/min [2880000], rate=43406.18/min [2890000], rate=43458.65/min [2900000], rate=43510.88/min [2910000], rate=43476.10/min [2920000], rate=43495.53/min [2930000], rate=43568.77/min [2940000], rate=43620.18/min [2950000], rate=43682.13/min [2960000], rate=43754.62/min [2970000], rate=43816.08/min [2980000], rate=43888.07/min [2990000], rate=43949.04/min [3000000], rate=44009.78/min [3010000], rate=44081.03/min [3020000], rate=44152.05/min [3030000], rate=44222.82/min [3040000], rate=44293.35/min [3050000], rate=44374.39/min [3060000], rate=44444.44/min [3070000], rate=44460.54/min [3080000], rate=44519.39/min [3090000], rate=44578.02/min [3100000], rate=44465.69/min [3110000], rate=44354.65/min [3120000], rate=44286.73/min [3130000], rate=43735.44/min [3140000], rate=43250.69/min [3150000], rate=42798.91/min [3160000], rate=42463.61/min [3170000], rate=42436.41/min [3180000], rate=42390.58/min [3190000], rate=42345.13/min [3200000], rate=42290.75/min [3210000], rate=42190.58/min [3220000], rate=42091.50/min [3230000], rate=42039.05/min [3240000], rate=42023.35/min [3250000], rate=41962.56/min [3260000], rate=41893.34/min [3270000], rate=41851.54/min [3280000], rate=41801.19/min [3290000], rate=41760.10/min [3300000], rate=41710.55/min [3310000], rate=41661.42/min [3320000], rate=41630.09/min [3330000], rate=41616.33/min [3340000], rate=41611.30/min [3350000], rate=41597.68/min [3360000], rate=41618.50/min [3370000], rate=41622.07/min [3380000], rate=41617.07/min [3390000], rate=41612.11/min [3400000], rate=41632.65/min [2720000], rate=40108.13/min [2730000], rate=40245.70/min [2740000], rate=40373.28/min [2750000], rate=40293.04/min [2760000], rate=40243.01/min [2770000], rate=40203.19/min [2780000], rate=40163.74/min [2790000], rate=40124.64/min [2800000], rate=40085.90/min [2810000], rate=40066.54/min [2820000], rate=40018.92/min [2830000], rate=40113.39/min [2840000], rate=40198.16/min [2850000], rate=40292.18/min [2860000], rate=40262.79/min [2870000], rate=40027.89/min [2880000], rate=39542.33/min [2890000], rate=39151.05/min [2900000], rate=39101.12/min [2910000], rate=38886.41/min [2920000], rate=38632.86/min [2930000], rate=38552.63/min [2940000], rate=38515.28/min [2950000], rate=38411.46/min [2960000], rate=38308.89/min [2970000], rate=38223.94/min [2980000], rate=38156.21/min [2990000], rate=38113.45/min [3000000], rate=38054.97/min [3010000], rate=37981.07/min [3020000], rate=38059.23/min [3030000], rate=37969.92/min [3040000], rate=37905.24/min [3050000], rate=37896.04/min [3060000], rate=37840.07/min [3070000], rate=37800.12/min [3080000], rate=37783.68/min [3090000], rate=37751.99/min [3100000], rate=37735.85/min [3110000], rate=37727.46/min [3120000], rate=37696.34/min [3130000], rate=37673.02/min [3140000], rate=37657.41/min [3150000], rate=37641.90/min [3160000], rate=37641.45/min [3170000], rate=37655.91/min [3180000], rate=37670.29/min [3190000], rate=37684.58/min [3200000], rate=37706.21/min [3210000], rate=37727.72/min [3220000], rate=37756.50/min [3230000], rate=37777.78/min [3240000], rate=37813.65/min [3250000], rate=37849.38/min [3260000], rate=37899.63/min [3270000], rate=37942.37/min [3280000], rate=37984.94/min [3290000], rate=38027.36/min [3300000], rate=38084.25/min [3310000], rate=38148.29/min [3320000], rate=38212.16/min [3330000], rate=38261.20/min [3340000], rate=38317.40/min [3350000], rate=38380.75/min [3360000], rate=38443.94/min [3370000], rate=38506.95/min [3380000], rate=38577.14/min [3390000], rate=38639.82/min [3400000], rate=38702.33/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --filt_file /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 16000000.00 reads per min processed... 13500000.00 reads per min processed... 15000000.00 reads per min processed... 13200000.00 reads per min processed... 12000000.00 reads per min processed... 11142857.14 reads per min processed... 9333333.33 reads per min processed... 9000000.00 reads per min processed... 8727272.73 reads per min processed... 8500000.00 reads per min processed... 7714285.71 reads per min processed... 7600000.00 reads per min processed... 7500000.00 reads per min processed... 7411764.71 reads per min processed... 7333333.33 reads per min processed... 7263157.89 reads per min processed... 6857142.86 reads per min processed... 6818181.82 reads per min processed... 6782608.70 reads per min processed... 6750000.00 reads per min processed... 6720000.00 reads per min processed... 6692307.69 reads per min processed... 6428571.43 reads per min processed... 6413793.10 reads per min processed... 6400000.00 reads per min processed... 6387096.77 reads per min processed... 6375000.00 reads per min processed... 6363636.36 reads per min processed... 6171428.57 reads per min processed... 6166666.67 reads per min processed... 6162162.16 reads per min processed... 6157894.74 reads per min processed... 6000000.00 reads per min processed... 5857142.86 reads per min processed... 5860465.12 reads per min processed... 5733333.33 reads per min processed... 5739130.43 reads per min processed... 5744680.85 reads per min processed... 5750000.00 reads per min processed... 5640000.00 reads per min processed... 5647058.82 reads per min processed... 5653846.15 reads per min processed... 5660377.36 reads per min processed... 5666666.67 reads per min processed... 5672727.27 reads per min processed... 5678571.43 reads per min processed... 5684210.53 reads per min processed... 5593220.34 reads per min processed... 5600000.00 reads per min processed... 5606557.38 reads per min processed... 5612903.23 reads per min processed... 5619047.62 reads per min processed... 5625000.00 reads per min processed... 5630769.23 reads per min processed... 5636363.64 reads per min processed... 5641791.04 reads per min processed... 5647058.82 reads per min processed... 5652173.91 reads per min processed... 5577464.79 reads per min processed... 5661971.83 reads per min processed... 5746478.87 reads per min processed... 5750000.00 reads per min processed... 5833333.33 reads per min processed... 5835616.44 reads per min processed... 5917808.22 reads per min processed... 5918918.92 reads per min processed... 6000000.00 reads per min processed... 6081081.08 reads per min processed... 6080000.00 reads per min processed... 6160000.00 reads per min processed... 6157894.74 reads per min processed... 6236842.11 reads per min processed... 6233766.23 reads per min processed... 6230769.23 reads per min processed... 6150000.00 reads per min processed... 6148148.15 reads per min processed... 6146341.46 reads per min processed... 6144578.31 reads per min processed... 6142857.14 reads per min processed... 6141176.47 reads per min processed... 6139534.88 reads per min processed... 6137931.03 reads per min processed... 6136363.64 reads per min processed... 6134831.46 reads per min processed... 6133333.33 reads per min processed... 6065217.39 reads per min processed... 6064516.13 reads per min processed... 6063829.79 reads per min processed... 6063157.89 reads per min processed... 6062500.00 reads per min processed... 6061855.67 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5944954.13 reads per min processed... 5945454.55 reads per min processed... 5945945.95 reads per min processed... 5946428.57 reads per min processed... 5946902.65 reads per min processed... 5947368.42 reads per min processed... 5947826.09 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.hcQnTjIbJB/EndoN_FFPE_L09_RNA_01_B23LG7FLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -313683.068650 EM: Round [1] log likelihood: -313314.462047 EM: Round [2] log likelihood: -313176.841271 EM: Round [3] log likelihood: -313111.643914 EM: Round [4] log likelihood: -313077.224226 EM: Round [5] log likelihood: -313057.908155 EM: Round [6] log likelihood: -313046.520553 EM: Round [7] log likelihood: -313039.481377 EM: Round [8] log likelihood: -313034.925700 EM: Round [9] log likelihood: -313031.848553 EM: Round [10] log likelihood: -313029.688845 EM: Round [11] log likelihood: -313028.121292 EM: Round [12] log likelihood: -313026.950020 EM: Round [13] log likelihood: -313026.052698 EM: Round [14] log likelihood: -313025.350279 EM: Round [15] log likelihood: -313024.790083 EM: Round [16] log likelihood: -313024.336005 EM: Round [17] log likelihood: -313023.962679 EM: Round [18] log likelihood: -313023.651887 EM: Round [19] log likelihood: -313023.390284 EM: Round [20] log likelihood: -313023.167917 EM: Round [21] log likelihood: -313022.977248 EM: Round [22] log likelihood: -313022.812483 EM: Round [23] log likelihood: -313022.669108 EM: Round [24] log likelihood: -313022.543565 EM: Round [25] log likelihood: -313022.433019 EM: Round [26] log likelihood: -313022.335184 EM: Round [27] log likelihood: -313022.248203 EM: Round [28] log likelihood: -313022.170550 EM: Round [29] log likelihood: -313022.100965 EM: Round [30] log likelihood: -313022.038394 EM: Round [31] log likelihood: -313021.981955 EM: Round [32] log likelihood: -313021.930902 EM: Round [33] log likelihood: -313021.884598 EM: Round [34] log likelihood: -313021.842500 EM: Round [35] log likelihood: -313021.804141 EM: Round [36] log likelihood: -313021.769116 EM: Round [37] log likelihood: -313021.737073 EM: Round [38] log likelihood: -313021.707707 EM: Round [39] log likelihood: -313021.680749 EM: Round [40] log likelihood: -313021.655961 EM: Round [41] log likelihood: -313021.633137 EM: Round [42] log likelihood: -313021.612090 EM: Round [43] log likelihood: -313021.592658 EM: Round [44] log likelihood: -313021.574692 EM: Round [45] log likelihood: -313021.558064 EM: Round [46] log likelihood: -313021.542655 EM: Round [47] log likelihood: -313021.528361 EM: Round [48] log likelihood: -313021.515087 EM: Round [49] log likelihood: -313021.502747 EM: Round [50] log likelihood: -313021.491265 EM: Round [51] log likelihood: -313021.480570 EM: Round [52] log likelihood: -313021.470599 EM: Round [53] log likelihood: -313021.461295 EM: Round [54] log likelihood: -313021.452605 EM: Round [55] log likelihood: -313021.444482 EM: Round [56] log likelihood: -313021.436882 EM: Round [57] log likelihood: -313021.429766 EM: Round [58] log likelihood: -313021.423097 EM: Round [59] log likelihood: -313021.416842 EM: Round [60] log likelihood: -313021.410970 EM: Round [61] log likelihood: -313021.405453 EM: Round [62] log likelihood: -313021.400267 EM: Round [63] log likelihood: -313021.395386 EM: Round [64] log likelihood: -313021.390790 EM: Round [65] log likelihood: -313021.386459 EM: Round [66] log likelihood: -313021.382374 EM: Round [67] log likelihood: -313021.378518 EM: Round [68] log likelihood: -313021.374876 EM: Round [69] log likelihood: -313021.371432 EM: Round [70] log likelihood: -313021.368175 EM: Round [71] log likelihood: -313021.365090 EM: Round [72] log likelihood: -313021.362168 EM: Round [73] log likelihood: -313021.359397 EM: Round [74] log likelihood: -313021.356767 EM: Round [75] log likelihood: -313021.354270 EM: Round [76] log likelihood: -313021.351897 EM: Round [77] log likelihood: -313021.349640 EM: Round [78] log likelihood: -313021.347492 EM: Round [79] log likelihood: -313021.345446 EM: Round [80] log likelihood: -313021.343496 EM: Round [81] log likelihood: -313021.341636 EM: Round [82] log likelihood: -313021.339861 EM: Round [83] log likelihood: -313021.338165 EM: Round [84] log likelihood: -313021.336544 EM: Round [85] log likelihood: -313021.334993 EM: Round [86] log likelihood: -313021.333509 EM: Round [87] log likelihood: -313021.332088 EM: Round [88] log likelihood: -313021.330725 EM: Round [89] log likelihood: -313021.329418 EM: Round [90] log likelihood: -313021.328164 EM: Round [91] log likelihood: -313021.326959 EM: Round [92] log likelihood: -313021.325802 EM: Round [93] log likelihood: -313021.324689 EM: Round [94] log likelihood: -313021.323617 EM: Round [95] log likelihood: -313021.322586 EM: Round [96] log likelihood: -313021.321592 EM: Round [97] log likelihood: -313021.320634 EM: Round [98] log likelihood: -313021.319710 EM: Round [99] log likelihood: -313021.318819 EM: Round [100] log likelihood: -313021.317957 EM: Round [101] log likelihood: -313021.317125 EM: Round [102] log likelihood: -313021.316321 EM: Round [103] log likelihood: -313021.315543 EM: Round [104] log likelihood: -313021.314790 EM: Round [105] log likelihood: -313021.314061 EM: Round [106] log likelihood: -313021.313355 EM: Round [107] log likelihood: -313021.312670 EM: Round [108] log likelihood: -313021.312006 EM: Round [109] log likelihood: -313021.311362 EM: Round [110] log likelihood: -313021.310737 EM: Round [111] log likelihood: -313021.310130 EM: Round [112] log likelihood: -313021.309541 EM: Round [113] log likelihood: -313021.308968 EM: Round [114] log likelihood: -313021.308411 EM: Round [115] log likelihood: -313021.307869 EM: Round [116] log likelihood: -313021.307342 EM: Round [117] log likelihood: -313021.306829 EM: Round [118] log likelihood: -313021.306329 EM: Round [119] log likelihood: -313021.305843 EM: Round [120] log likelihood: -313021.305369 EM: Round [121] log likelihood: -313021.304907 EM: Round [122] log likelihood: -313021.304456 EM: Round [123] log likelihood: -313021.304016 EM: Round [124] log likelihood: -313021.303588 EM: Round [125] log likelihood: -313021.303169 EM: Round [126] log likelihood: -313021.302761 EM: Round [127] log likelihood: -313021.302362 EM: Round [128] log likelihood: -313021.301973 EM: Round [129] log likelihood: -313021.301592 EM: Round [130] log likelihood: -313021.301220 EM: Round [131] log likelihood: -313021.300857 EM: Round [132] log likelihood: -313021.300502 EM: Round [133] log likelihood: -313021.300154 EM: Round [134] log likelihood: -313021.299814 EM: Round [135] log likelihood: -313021.299482 EM: Round [136] log likelihood: -313021.299157 EM: Round [137] log likelihood: -313021.298839 EM: Round [138] log likelihood: -313021.298527 EM: Round [139] log likelihood: -313021.298222 EM: Round [140] log likelihood: -313021.297924 EM: Round [141] log likelihood: -313021.297631 EM: Round [142] log likelihood: -313021.297345 EM: Round [143] log likelihood: -313021.297064 EM: Round [144] log likelihood: -313021.296790 EM: Round [145] log likelihood: -313021.296520 EM: Round [146] log likelihood: -313021.296256 EM: Round [147] log likelihood: -313021.295998 EM: Round [148] log likelihood: -313021.295744 EM: Round [149] log likelihood: -313021.295496 EM: Round [150] log likelihood: -313021.295252 EM: Round [151] log likelihood: -313021.295013 EM: Round [152] log likelihood: -313021.294779 EM: Round [153] log likelihood: -313021.294549 EM: Round [154] log likelihood: -313021.294324 EM: Round [155] log likelihood: -313021.294103 EM: Round [156] log likelihood: -313021.293886 EM: Round [157] log likelihood: -313021.293673 EM: Round [158] log likelihood: -313021.293465 EM: Round [159] log likelihood: -313021.293260 EM: Round [160] log likelihood: -313021.293059 EM: Round [161] log likelihood: -313021.292862 EM: Round [162] log likelihood: -313021.292668 EM: Round [163] log likelihood: -313021.292478 EM: Round [164] log likelihood: -313021.292292 EM: Round [165] log likelihood: -313021.292109 EM: Round [166] log likelihood: -313021.291929 EM: Round [167] log likelihood: -313021.291753 EM: Round [168] log likelihood: -313021.291580 EM: Round [169] log likelihood: -313021.291410 EM: Round [170] log likelihood: -313021.291243 EM: Round [171] log likelihood: -313021.291080 EM: Round [172] log likelihood: -313021.290919 EM: Round [173] log likelihood: -313021.290761 EM: Round [174] log likelihood: -313021.290606 EM: Round [175] log likelihood: -313021.290454 EM: Round [176] log likelihood: -313021.290304 EM: Round [177] log likelihood: -313021.290158 EM: Round [178] log likelihood: -313021.290014 EM: Round [179] log likelihood: -313021.289872 EM: Round [180] log likelihood: -313021.289733 EM: Round [181] log likelihood: -313021.289596 EM: Round [182] log likelihood: -313021.289462 EM: Round [183] log likelihood: -313021.289331 EM: Round [184] log likelihood: -313021.289201 EM: Round [185] log likelihood: -313021.289074 EM: Round [186] log likelihood: -313021.288950 EM: Round [187] log likelihood: -313021.288827 EM: Round [188] log likelihood: -313021.288707 EM: Round [189] log likelihood: -313021.288589 EM: Round [190] log likelihood: -313021.288473 EM: Round [191] log likelihood: -313021.288359 EM: Round [192] log likelihood: -313021.288247 EM: Round [193] log likelihood: -313021.288137 EM: Round [194] log likelihood: -313021.288029 EM: Round [195] log likelihood: -313021.287923 EM: Round [196] log likelihood: -313021.287818 EM: Round [197] log likelihood: -313021.287716 EM: Round [198] log likelihood: -313021.287615 EM: Round [199] log likelihood: -313021.287517 EM: Stopping iterations at round 199 due to insufficient improvement in likelihood. EM: Starting log likelihood: -313446.779778 EM: Round [1] log likelihood: -313127.381884 EM: Round [2] log likelihood: -313013.742851 EM: Round [3] log likelihood: -312961.337506 EM: Round [4] log likelihood: -312934.234634 EM: Round [5] log likelihood: -312919.281569 EM: Round [6] log likelihood: -312910.599946 EM: Round [7] log likelihood: -312905.313729 EM: Round [8] log likelihood: -312901.945392 EM: Round [9] log likelihood: -312899.706526 EM: Round [10] log likelihood: -312898.160554 EM: Round [11] log likelihood: -312897.056445 EM: Round [12] log likelihood: -312896.244370 EM: Round [13] log likelihood: -312895.631637 EM: Round [14] log likelihood: -312895.158949 EM: Round [15] log likelihood: -312894.787186 EM: Round [16] log likelihood: -312894.489815 EM: Round [17] log likelihood: -312894.248386 EM: Round [18] log likelihood: -312894.049780 EM: Round [19] log likelihood: -312893.884482 EM: Round [20] log likelihood: -312893.745468 EM: Round [21] log likelihood: -312893.627466 EM: Round [22] log likelihood: -312893.526462 EM: Round [23] log likelihood: -312893.439358 EM: Round [24] log likelihood: -312893.363732 EM: Round [25] log likelihood: -312893.297670 EM: Round [26] log likelihood: -312893.239642 EM: Round [27] log likelihood: -312893.188415 EM: Round [28] log likelihood: -312893.142984 EM: Round [29] log likelihood: -312893.102523 EM: Round [30] log likelihood: -312893.066349 EM: Round [31] log likelihood: -312893.033894 EM: Round [32] log likelihood: -312893.004678 EM: Round [33] log likelihood: -312892.978299 EM: Round [34] log likelihood: -312892.954413 EM: Round [35] log likelihood: -312892.932727 EM: Round [36] log likelihood: -312892.912990 EM: Round [37] log likelihood: -312892.894985 EM: Round [38] log likelihood: -312892.878524 EM: Round [39] log likelihood: -312892.863442 EM: Round [40] log likelihood: -312892.849598 EM: Round [41] log likelihood: -312892.836865 EM: Round [42] log likelihood: -312892.825135 EM: Round [43] log likelihood: -312892.814308 EM: Round [44] log likelihood: -312892.804301 EM: Round [45] log likelihood: -312892.795035 EM: Round [46] log likelihood: -312892.786443 EM: Round [47] log likelihood: -312892.778465 EM: Round [48] log likelihood: -312892.771046 EM: Round [49] log likelihood: -312892.764137 EM: Round [50] log likelihood: -312892.757696 EM: Round [51] log likelihood: -312892.751682 EM: Round [52] log likelihood: -312892.746061 EM: Round [53] log likelihood: -312892.740800 EM: Round [54] log likelihood: -312892.735870 EM: Round [55] log likelihood: -312892.731246 EM: Round [56] log likelihood: -312892.726903 EM: Round [57] log likelihood: -312892.722820 EM: Round [58] log likelihood: -312892.718977 EM: Round [59] log likelihood: -312892.715356 EM: Round [60] log likelihood: -312892.711942 EM: Round [61] log likelihood: -312892.708717 EM: Round [62] log likelihood: -312892.705671 EM: Round [63] log likelihood: -312892.702788 EM: Round [64] log likelihood: -312892.700059 EM: Round [65] log likelihood: -312892.697473 EM: Round [66] log likelihood: -312892.695020 EM: Round [67] log likelihood: -312892.692690 EM: Round [68] log likelihood: -312892.690477 EM: Round [69] log likelihood: -312892.688371 EM: Round [70] log likelihood: -312892.686367 EM: Round [71] log likelihood: -312892.684458 EM: Round [72] log likelihood: -312892.682638 EM: Round [73] log likelihood: -312892.680901 EM: Round [74] log likelihood: -312892.679243 EM: Round [75] log likelihood: -312892.677657 EM: Round [76] log likelihood: -312892.676142 EM: Round [77] log likelihood: -312892.674691 EM: Round [78] log likelihood: -312892.673301 EM: Round [79] log likelihood: -312892.671970 EM: Round [80] log likelihood: -312892.670692 EM: Round [81] log likelihood: -312892.669467 EM: Round [82] log likelihood: -312892.668290 EM: Round [83] log likelihood: -312892.667158 EM: Round [84] log likelihood: -312892.666071 EM: Round [85] log likelihood: -312892.665024 EM: Round [86] log likelihood: -312892.664017 EM: Round [87] log likelihood: -312892.663047 EM: Round [88] log likelihood: -312892.662112 EM: Round [89] log likelihood: -312892.661210 EM: Round [90] log likelihood: -312892.660340 EM: Round [91] log likelihood: -312892.659500 EM: Round [92] log likelihood: -312892.658688 EM: Round [93] log likelihood: -312892.657904 EM: Round [94] log likelihood: -312892.657146 EM: Round [95] log likelihood: -312892.656413 EM: Round [96] log likelihood: -312892.655704 EM: Round [97] log likelihood: -312892.655017 EM: Round [98] log likelihood: -312892.654351 EM: Round [99] log likelihood: -312892.653706 EM: Round [100] log likelihood: -312892.653081 EM: Round [101] log likelihood: -312892.652475 EM: Round [102] log likelihood: -312892.651887 EM: Round [103] log likelihood: -312892.651316 EM: Round [104] log likelihood: -312892.650762 EM: Round [105] log likelihood: -312892.650223 EM: Round [106] log likelihood: -312892.649700 EM: Round [107] log likelihood: -312892.649192 EM: Round [108] log likelihood: -312892.648697 EM: Round [109] log likelihood: -312892.648216 EM: Round [110] log likelihood: -312892.647748 EM: Round [111] log likelihood: -312892.647293 EM: Round [112] log likelihood: -312892.646849 EM: Round [113] log likelihood: -312892.646417 EM: Round [114] log likelihood: -312892.645996 EM: Round [115] log likelihood: -312892.645587 EM: Round [116] log likelihood: -312892.645187 EM: Round [117] log likelihood: -312892.644797 EM: Round [118] log likelihood: -312892.644417 EM: Round [119] log likelihood: -312892.644047 EM: Round [120] log likelihood: -312892.643685 EM: Round [121] log likelihood: -312892.643332 EM: Round [122] log likelihood: -312892.642988 EM: Round [123] log likelihood: -312892.642651 EM: Round [124] log likelihood: -312892.642323 EM: Round [125] log likelihood: -312892.642002 EM: Round [126] log likelihood: -312892.641689 EM: Round [127] log likelihood: -312892.641383 EM: Round [128] log likelihood: -312892.641083 EM: Round [129] log likelihood: -312892.640791 EM: Round [130] log likelihood: -312892.640505 EM: Round [131] log likelihood: -312892.640225 EM: Round [132] log likelihood: -312892.639951 EM: Round [133] log likelihood: -312892.639684 EM: Round [134] log likelihood: -312892.639422 EM: Round [135] log likelihood: -312892.639166 EM: Round [136] log likelihood: -312892.638915 EM: Round [137] log likelihood: -312892.638670 EM: Round [138] log likelihood: -312892.638429 EM: Round [139] log likelihood: -312892.638194 EM: Round [140] log likelihood: -312892.637964 EM: Round [141] log likelihood: -312892.637739 EM: Round [142] log likelihood: -312892.637518 EM: Round [143] log likelihood: -312892.637302 EM: Round [144] log likelihood: -312892.637090 EM: Round [145] log likelihood: -312892.636882 EM: Round [146] log likelihood: -312892.636679 EM: Round [147] log likelihood: -312892.636480 EM: Round [148] log likelihood: -312892.636284 EM: Round [149] log likelihood: -312892.636093 EM: Round [150] log likelihood: -312892.635905 EM: Round [151] log likelihood: -312892.635722 EM: Round [152] log likelihood: -312892.635541 EM: Round [153] log likelihood: -312892.635365 EM: Round [154] log likelihood: -312892.635191 EM: Round [155] log likelihood: -312892.635022 EM: Round [156] log likelihood: -312892.634855 EM: Round [157] log likelihood: -312892.634692 EM: Round [158] log likelihood: -312892.634532 EM: Round [159] log likelihood: -312892.634375 EM: Round [160] log likelihood: -312892.634220 EM: Round [161] log likelihood: -312892.634069 EM: Round [162] log likelihood: -312892.633921 EM: Round [163] log likelihood: -312892.633776 EM: Round [164] log likelihood: -312892.633633 EM: Round [165] log likelihood: -312892.633493 EM: Round [166] log likelihood: -312892.633356 EM: Round [167] log likelihood: -312892.633221 EM: Round [168] log likelihood: -312892.633089 EM: Round [169] log likelihood: -312892.632959 EM: Round [170] log likelihood: -312892.632832 EM: Round [171] log likelihood: -312892.632707 EM: Round [172] log likelihood: -312892.632584 EM: Round [173] log likelihood: -312892.632464 EM: Round [174] log likelihood: -312892.632346 EM: Round [175] log likelihood: -312892.632230 EM: Round [176] log likelihood: -312892.632117 EM: Round [177] log likelihood: -312892.632005 EM: Round [178] log likelihood: -312892.631896 EM: Round [179] log likelihood: -312892.631788 EM: Round [180] log likelihood: -312892.631683 EM: Round [181] log likelihood: -312892.631579 EM: Round [182] log likelihood: -312892.631477 EM: Round [183] log likelihood: -312892.631378 EM: Stopping iterations at round 183 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293914112 > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir --annotate /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir -done, see /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1444, filtered: 11038) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.hcQnTjIbJB/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.hcQnTjIbJB/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000264618.2] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000236166.1] WARNING, no entry stored in dbm for [ENSG00000272235.1] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000251676.2] WARNING, no entry stored in dbm for [ENSG00000267409.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000227893.1] WARNING, no entry stored in dbm for [ENSG00000260588.1] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000255815.3] WARNING, no entry stored in dbm for [ENSG00000236156.2] WARNING, no entry stored in dbm for [ENSG00000226777.7] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000271795.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000264859.6] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000236156.2] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000261526.2] WARNING, no entry stored in dbm for [ENSG00000282890.1] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000267056.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000286867.1] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000229532.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000250560.2] WARNING, no entry stored in dbm for [ENSG00000228414.7] WARNING, no entry stored in dbm for [ENSG00000235618.8] WARNING, no entry stored in dbm for [ENSG00000240750.3] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000196922.10] WARNING, no entry stored in dbm for [ENSG00000196922.10] WARNING, no entry stored in dbm for [ENSG00000204789.4] WARNING, no entry stored in dbm for [ENSG00000226363.3] WARNING, no entry stored in dbm for [ENSG00000286583.1] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000230202.1] WARNING, no entry stored in dbm for [ENSG00000226048.1] WARNING, no entry stored in dbm for [ENSG00000213866.3] WARNING, no entry stored in dbm for [ENSG00000274656.1] WARNING, no entry stored in dbm for [ENSG00000243426.3] WARNING, no entry stored in dbm for [ENSG00000263815.2] WARNING, no entry stored in dbm for [ENSG00000265123.2] WARNING, no entry stored in dbm for [ENSG00000242614.3] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000237356.7] WARNING, no entry stored in dbm for [ENSG00000272397.1] WARNING, no entry stored in dbm for [ENSG00000234761.1] WARNING, no entry stored in dbm for [ENSG00000237512.6] WARNING, no entry stored in dbm for [ENSG00000250980.1] WARNING, no entry stored in dbm for [ENSG00000235141.1] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored in dbm for [ENSG00000225914.3] WARNING, no entry stored in dbm for [ENSG00000179571.10] WARNING, no entry stored in dbm for [ENSG00000182796.14] WARNING, no entry stored in dbm for [ENSG00000280046.1] WARNING, no entry stored in dbm for [ENSG00000224043.8] WARNING, no entry stored in dbm for [ENSG00000253161.5] WARNING, no entry stored in dbm for [ENSG00000232314.1] WARNING, no entry stored in dbm for [ENSG00000236583.1] WARNING, no entry stored in dbm for [ENSG00000216906.2] WARNING, no entry stored in dbm for [ENSG00000240549.2] WARNING, no entry stored in dbm for [ENSG00000238172.2] WARNING, no entry stored in dbm for [ENSG00000236384.7] WARNING, no entry stored in dbm for [ENSG00000227157.2] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000247828.8] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000235203.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000282390.1] WARNING, no entry stored in dbm for [ENSG00000259977.1] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000267491.1] WARNING, no entry stored in dbm for [ENSG00000285517.1] WARNING, no entry stored in dbm for [ENSG00000106610.15] WARNING, no entry stored in dbm for [ENSG00000279353.1] WARNING, no entry stored in dbm for [ENSG00000285280.2] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000284740.1] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000251676.2] WARNING, no entry stored in dbm for [ENSG00000234912.12] WARNING, no entry stored in dbm for [ENSG00000163597.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000152117.17] WARNING, no entry stored in dbm for [ENSG00000259488.2] WARNING, no entry stored in dbm for [ENSG00000258912.2] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000228983.9] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000229288.1] WARNING, no entry stored in dbm for [ENSG00000231234.2] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000257771.6] WARNING, no entry stored in dbm for [ENSG00000278643.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000226620.8] WARNING, no entry stored in dbm for [ENSG00000205488.9] WARNING, no entry stored in dbm for [ENSG00000251532.1] WARNING, no entry stored in dbm for [ENSG00000258692.2] WARNING, no entry stored in dbm for [ENSG00000251441.3] WARNING, no entry stored in dbm for [ENSG00000225678.2] WARNING, no entry stored in dbm for [ENSG00000230629.2] WARNING, no entry stored in dbm for [ENSG00000243366.3] WARNING, no entry stored in dbm for [ENSG00000279440.1] WARNING, no entry stored in dbm for [ENSG00000240494.2] WARNING, no entry stored in dbm for [ENSG00000227615.1] WARNING, no entry stored in dbm for [ENSG00000214374.2] WARNING, no entry stored in dbm for [ENSG00000240652.1] WARNING, no entry stored in dbm for [ENSG00000238069.1] WARNING, no entry stored in dbm for [ENSG00000244705.1] WARNING, no entry stored in dbm for [ENSG00000224291.1] WARNING, no entry stored in dbm for [ENSG00000250562.1] WARNING, no entry stored in dbm for [ENSG00000229235.1] WARNING, no entry stored in dbm for [ENSG00000234498.3] WARNING, no entry stored in dbm for [ENSG00000258506.2] WARNING, no entry stored in dbm for [ENSG00000172746.6] WARNING, no entry stored in dbm for [ENSG00000269609.6] WARNING, no entry stored in dbm for [ENSG00000264978.2] WARNING, no entry stored in dbm for [ENSG00000244425.3] WARNING, no entry stored in dbm for [ENSG00000275090.1] WARNING, no entry stored in dbm for [ENSG00000241175.3] WARNING, no entry stored in dbm for [ENSG00000240767.3] WARNING, no entry stored in dbm for [ENSG00000244399.3] WARNING, no entry stored in dbm for [ENSG00000244230.3] WARNING, no entry stored in dbm for [ENSG00000200966.1] WARNING, no entry stored in dbm for [ENSG00000222376.1] WARNING, no entry stored in dbm for [ENSG00000222987.1] WARNING, no entry stored in dbm for [ENSG00000222174.1] WARNING, no entry stored in dbm for [ENSG00000200379.1] WARNING, no entry stored in dbm for [ENSG00000222376.1] WARNING, no entry stored in dbm for [ENSG00000199218.1] WARNING, no entry stored in dbm for [ENSG00000222376.1] WARNING, no entry stored in dbm for [ENSG00000269900.3] WARNING, no entry stored in dbm for [ENSG00000258903.2] WARNING, no entry stored in dbm for [ENSG00000261126.7] WARNING, no entry stored in dbm for [ENSG00000204091.8] WARNING, no entry stored in dbm for [ENSG00000170919.16] WARNING, no entry stored in dbm for [ENSG00000225077.3] WARNING, no entry stored in dbm for [ENSG00000223704.2] WARNING, no entry stored in dbm for [ENSG00000213706.2] WARNING, no entry stored in dbm for [ENSG00000269386.5] WARNING, no entry stored in dbm for [ENSG00000250337.7] WARNING, no entry stored in dbm for [ENSG00000218426.5] WARNING, no entry stored in dbm for [ENSG00000286170.1] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000231503.4] WARNING, no entry stored in dbm for [ENSG00000249050.1] WARNING, no entry stored in dbm for [ENSG00000254658.3] WARNING, no entry stored in dbm for [ENSG00000253897.2] WARNING, no entry stored in dbm for [ENSG00000257167.2] WARNING, no entry stored in dbm for [ENSG00000180259.10] WARNING, no entry stored in dbm for [ENSG00000230461.9] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000248473.2] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000285751.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000251436.2] WARNING, no entry stored in dbm for [ENSG00000271437.1] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000229359.2] WARNING, no entry stored in dbm for [ENSG00000266962.2] WARNING, no entry stored in dbm for [ENSG00000226608.3] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000286027.1] WARNING, no entry stored in dbm for [ENSG00000250485.1] WARNING, no entry stored in dbm for [ENSG00000251182.2] WARNING, no entry stored in dbm for [ENSG00000287700.1] WARNING, no entry stored in dbm for [ENSG00000233892.1] WARNING, no entry stored in dbm for [ENSG00000255875.2] WARNING, no entry stored in dbm for [ENSG00000205331.5] WARNING, no entry stored in dbm for [ENSG00000229127.2] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000286340.1] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000260757.1] WARNING, no entry stored in dbm for [ENSG00000236991.6] WARNING, no entry stored in dbm for [ENSG00000206623.1] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000228623.6] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000124224.17] WARNING, no entry stored in dbm for [ENSG00000256742.1] WARNING, no entry stored in dbm for [ENSG00000185689.17] WARNING, no entry stored in dbm for [ENSG00000205360.6] WARNING, no entry stored in dbm for [ENSG00000215866.8] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000197847.12] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000272106.1] WARNING, no entry stored in dbm for [ENSG00000234801.3] WARNING, no entry stored in dbm for [ENSG00000231329.8] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000233673.7] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000233006.8] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000287069.1] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000223403.6] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000279748.1] WARNING, no entry stored in dbm for [ENSG00000244227.7] WARNING, no entry stored in dbm for [ENSG00000214144.3] WARNING, no entry stored in dbm for [ENSG00000257139.1] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000256576.2] WARNING, no entry stored in dbm for [ENSG00000258819.2] WARNING, no entry stored in dbm for [ENSG00000241213.2] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000231437.3] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000237339.5] WARNING, no entry stored in dbm for [ENSG00000223704.2] WARNING, no entry stored in dbm for [ENSG00000237491.10] WARNING, no entry stored in dbm for [ENSG00000236922.10] WARNING, no entry stored in dbm for [ENSG00000223823.1] WARNING, no entry stored in dbm for [ENSG00000223823.1] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000281404.2] WARNING, no entry stored in dbm for [ENSG00000281912.1] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000250334.6] WARNING, no entry stored in dbm for [ENSG00000277147.6] WARNING, no entry stored in dbm for [ENSG00000231419.6] WARNING, no entry stored in dbm for [ENSG00000226067.7] WARNING, no entry stored in dbm for [ENSG00000236854.2] WARNING, no entry stored in dbm for [ENSG00000259974.3] WARNING, no entry stored in dbm for [ENSG00000224843.8] WARNING, no entry stored in dbm for [ENSG00000180385.8] WARNING, no entry stored in dbm for [ENSG00000260034.1] WARNING, no entry stored in dbm for [ENSG00000282692.1] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000279805.1] WARNING, no entry stored in dbm for [ENSG00000288524.1] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000277946.1] WARNING, no entry stored in dbm for [ENSG00000236790.6] WARNING, no entry stored in dbm for [ENSG00000277654.6] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000261786.1] WARNING, no entry stored in dbm for [ENSG00000238231.2] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000223652.2] WARNING, no entry stored in dbm for [ENSG00000239533.6] WARNING, no entry stored in dbm for [ENSG00000272905.1] WARNING, no entry stored in dbm for [ENSG00000237604.1] WARNING, no entry stored in dbm for [ENSG00000225755.2] WARNING, no entry stored in dbm for [ENSG00000251665.1] WARNING, no entry stored in dbm for [ENSG00000237125.11] WARNING, no entry stored in dbm for [ENSG00000161912.18] WARNING, no entry stored in dbm for [ENSG00000251451.1] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000172297.7] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000251209.9] WARNING, no entry stored in dbm for [ENSG00000232520.2] WARNING, no entry stored in dbm for [ENSG00000240183.3] WARNING, no entry stored in dbm for [ENSG00000227183.3] WARNING, no entry stored in dbm for [ENSG00000248834.2] WARNING, no entry stored in dbm for [ENSG00000276291.5] WARNING, no entry stored in dbm for [ENSG00000239480.1] WARNING, no entry stored in dbm for [ENSG00000244097.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000229321.2] WARNING, no entry stored in dbm for [ENSG00000234807.7] WARNING, no entry stored in dbm for [ENSG00000167798.17] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000242209.1] WARNING, no entry stored in dbm for [ENSG00000213641.4] WARNING, no entry stored in dbm for [ENSG00000271913.7] WARNING, no entry stored in dbm for [ENSG00000260565.7] WARNING, no entry stored in dbm for [ENSG00000214900.11] WARNING, no entry stored in dbm for [ENSG00000287706.1] WARNING, no entry stored in dbm for [ENSG00000255262.3] WARNING, no entry stored in dbm for [ENSG00000184991.3] WARNING, no entry stored in dbm for [ENSG00000215093.3] WARNING, no entry stored in dbm for [ENSG00000259612.1] WARNING, no entry stored in dbm for [ENSG00000258730.1] WARNING, no entry stored in dbm for [ENSG00000286042.1] WARNING, no entry stored in dbm for [ENSG00000260261.2] WARNING, no entry stored in dbm for [ENSG00000259511.3] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000236021.2] WARNING, no entry stored in dbm for [ENSG00000225778.5] WARNING, no entry stored in dbm for [ENSG00000248550.4] WARNING, no entry stored in dbm for [ENSG00000229760.1] WARNING, no entry stored in dbm for [ENSG00000286442.1] WARNING, no entry stored in dbm for [ENSG00000228314.1] WARNING, no entry stored in dbm for [ENSG00000235325.1] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000233937.7] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000276710.4] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000080947.15] WARNING, no entry stored in dbm for [ENSG00000233973.7] WARNING, no entry stored in dbm for [ENSG00000270533.2] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000227638.2] WARNING, no entry stored in dbm for [ENSG00000230300.1] WARNING, no entry stored in dbm for [ENSG00000154608.14] WARNING, no entry stored in dbm for [ENSG00000227036.8] WARNING, no entry stored in dbm for [ENSG00000228219.1] WARNING, no entry stored in dbm for [ENSG00000285803.1] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000236830.7] WARNING, no entry stored in dbm for [ENSG00000240809.1] WARNING, no entry stored in dbm for [ENSG00000257167.2] WARNING, no entry stored in dbm for [ENSG00000224635.2] WARNING, no entry stored in dbm for [ENSG00000285417.1] WARNING, no entry stored in dbm for [ENSG00000285417.1] WARNING, no entry stored in dbm for [ENSG00000259728.5] WARNING, no entry stored in dbm for [ENSG00000262049.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000179362.14] WARNING, no entry stored in dbm for [ENSG00000227262.3] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000229498.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000233947.1] WARNING, no entry stored in dbm for [ENSG00000213963.6] WARNING, no entry stored in dbm for [ENSG00000253937.1] WARNING, no entry stored in dbm for [ENSG00000214855.9] WARNING, no entry stored in dbm for [ENSG00000268812.3] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000255136.3] WARNING, no entry stored in dbm for [ENSG00000261239.6] WARNING, no entry stored in dbm for [ENSG00000277112.3] WARNING, no entry stored in dbm for [ENSG00000223891.6] WARNING, no entry stored in dbm for [ENSG00000287560.1] WARNING, no entry stored in dbm for [ENSG00000233268.3] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000224515.1] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000232347.1] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000288583.1] WARNING, no entry stored in dbm for [ENSG00000287368.1] WARNING, no entry stored in dbm for [ENSG00000219928.2] WARNING, no entry stored in dbm for [ENSG00000234426.3] WARNING, no entry stored in dbm for [ENSG00000259118.5] WARNING, no entry stored in dbm for [ENSG00000284224.1] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000287449.1] WARNING, no entry stored in dbm for [ENSG00000237686.7] WARNING, no entry stored in dbm for [ENSG00000286546.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000279833.1] WARNING, no entry stored in dbm for [ENSG00000286491.1] WARNING, no entry stored in dbm for [ENSG00000232218.1] WARNING, no entry stored in dbm for [ENSG00000233708.1] WARNING, no entry stored in dbm for [ENSG00000229425.3] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000275103.1] WARNING, no entry stored in dbm for [ENSG00000231713.2] WARNING, no entry stored in dbm for [ENSG00000259205.2] WARNING, no entry stored in dbm for [ENSG00000241684.6] WARNING, no entry stored in dbm for [ENSG00000215837.7] WARNING, no entry stored in dbm for [ENSG00000241473.1] WARNING, no entry stored in dbm for [ENSG00000277561.5] WARNING, no entry stored in dbm for [ENSG00000259976.3] WARNING, no entry stored in dbm for [ENSG00000280029.4] WARNING, no entry stored in dbm for [ENSG00000225914.3] WARNING, no entry stored in dbm for [ENSG00000280029.4] WARNING, no entry stored in dbm for [ENSG00000280225.1] WARNING, no entry stored in dbm for [ENSG00000267532.5] WARNING, no entry stored in dbm for [ENSG00000176183.8] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000260628.5] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000261819.1] WARNING, no entry stored in dbm for [ENSG00000254609.1] WARNING, no entry stored in dbm for [ENSG00000278133.1] WARNING, no entry stored in dbm for [ENSG00000215068.8] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000260498.6] WARNING, no entry stored in dbm for [ENSG00000249621.1] WARNING, no entry stored in dbm for [ENSG00000251216.2] WARNING, no entry stored in dbm for [ENSG00000230698.1] WARNING, no entry stored in dbm for [ENSG00000259709.1] WARNING, no entry stored in dbm for [ENSG00000275454.1] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000241462.1] WARNING, no entry stored in dbm for [ENSG00000227615.1] WARNING, no entry stored in dbm for [ENSG00000277096.1] WARNING, no entry stored in dbm for [ENSG00000242474.3] WARNING, no entry stored in dbm for [ENSG00000242474.3] WARNING, no entry stored in dbm for [ENSG00000242622.2] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000246250.3] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000246250.3] WARNING, no entry stored in dbm for [ENSG00000259905.7] WARNING, no entry stored in dbm for [ENSG00000257415.1] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000237666.2] WARNING, no entry stored in dbm for [ENSG00000248802.1] WARNING, no entry stored in dbm for [ENSG00000260083.2] WARNING, no entry stored in dbm for [ENSG00000217455.8] WARNING, no entry stored in dbm for [ENSG00000279070.2] WARNING, no entry stored in dbm for [ENSG00000231359.3] WARNING, no entry stored in dbm for [ENSG00000213657.3] WARNING, no entry stored in dbm for [ENSG00000197099.8] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000286275.1] WARNING, no entry stored in dbm for [ENSG00000260844.2] WARNING, no entry stored in dbm for [ENSG00000240752.1] WARNING, no entry stored in dbm for [ENSG00000227615.1] WARNING, no entry stored in dbm for [ENSG00000255858.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000243352.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000243562.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000239748.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000239211.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000243049.3] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000264582.2] WARNING, no entry stored in dbm for [ENSG00000256973.1] WARNING, no entry stored in dbm for [ENSG00000240183.3] WARNING, no entry stored in dbm for [ENSG00000250166.3] WARNING, no entry stored in dbm for [ENSG00000254519.5] WARNING, no entry stored in dbm for [ENSG00000287086.1] WARNING, no entry stored in dbm for [ENSG00000184188.6] WARNING, no entry stored in dbm for [ENSG00000286525.1] WARNING, no entry stored in dbm for [ENSG00000256802.2] WARNING, no entry stored in dbm for [ENSG00000268093.1] WARNING, no entry stored in dbm for [ENSG00000267275.1] WARNING, no entry stored in dbm for [ENSG00000231409.3] WARNING, no entry stored in dbm for [ENSG00000226107.1] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267605.7] WARNING, no entry stored in dbm for [ENSG00000267078.1] WARNING, no entry stored in dbm for [ENSG00000251199.6] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000271018.1] WARNING, no entry stored in dbm for [ENSG00000224237.1] WARNING, no entry stored in dbm for [ENSG00000261526.2] WARNING, no entry stored in dbm for [ENSG00000257453.1] WARNING, no entry stored in dbm for [ENSG00000254363.6] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000286068.1] WARNING, no entry stored in dbm for [ENSG00000259408.2] WARNING, no entry stored in dbm for [ENSG00000231332.2] WARNING, no entry stored in dbm for [ENSG00000259408.2] WARNING, no entry stored in dbm for [ENSG00000226125.2] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000282890.1] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000280417.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000285754.1] WARNING, no entry stored in dbm for [ENSG00000280007.1] WARNING, no entry stored in dbm for [ENSG00000262292.2] WARNING, no entry stored in dbm for [ENSG00000198491.3] WARNING, no entry stored in dbm for [ENSG00000287123.1] WARNING, no entry stored in dbm for [ENSG00000235725.1] WARNING, no entry stored in dbm for [ENSG00000267405.1] WARNING, no entry stored in dbm for [ENSG00000224280.1] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000249188.1] WARNING, no entry stored in dbm for [ENSG00000241764.4] WARNING, no entry stored in dbm for [ENSG00000280347.1] WARNING, no entry stored in dbm for [ENSG00000248503.2] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000254092.2] * STAR-Fusion complete. See output: /tmp/nxf.hcQnTjIbJB/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)